CuGenDBv2

Gene ID	Cucsat.G15058
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	homeobox-leucine zipper protein GLABRA 2-like
Genome location	ctg1918:139163..139808
RNA-Seq Expression	Cucsat.G15058
Synteny	Cucsat.G15058
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function) GO:0003677 - DNA binding (molecular function) GO:0008289 - lipid binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8650727.1 hypothetical protein Csa_023399 [Cucumis sativus]

2.41e-55

100

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE
        MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE

Query:  NELV
        NELV
Subjt:  NELV

KAG6606761.1 Homeobox-leucine zipper protein GLABRA 2, partial [Cucurbita argyrosperma subsp. sororia]

1.77e-19

67.65

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE------EEEEEEG
        M ADMSNNNN    LAFTKDFFSSPALSLTLAGIFRR +  E GDVEMEEVDDGS G  RRD+     AEVSSEN GPV RSRS+++       EE EEG
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE------EEEEEEG

Query:  GG
         G
Subjt:  GG

XP_023523628.1 homeobox-leucine zipper protein GLABRA 2 isoform X2 [Cucurbita pepo subsp. pepo]

6.45e-19

67.65

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE------EEEEEEG
        M ADMSNNNN    LAFTKDFFSSPALSLTLAGIFRR +  E GDVEMEEVDDGS G  RRD+     AEVSSEN GPV RSRS+++       EE EEG
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE------EEEEEEG

Query:  GG
         G
Subjt:  GG

XP_031737751.1 homeobox-leucine zipper protein GLABRA 2-like [Cucumis sativus]

2.82e-55

100

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE
        MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE

Query:  NELV
        NELV
Subjt:  NELV

XP_038904725.1 homeobox-leucine zipper protein GLABRA 2-like [Benincasa hispida]

5.74e-23

74.71

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSD-HEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE
        MGADMSNNNN  N LAFTKDFFSSPALSLTLAGIFRR +  E GDVEMEEVDDG    ARRD+    TAE+SSENSGP+ RSRS++E
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSD-HEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE

TrEMBL top hits

e value

%identity

Alignment

A0A097A1M3 Multicellular trichome development class IV homeodomain-leucine zipper transcription factor

1.37e-55

100

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE
        MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE

Query:  NELV
        NELV
Subjt:  NELV

A0A0A0LBQ1 Uncharacterized protein

1.32e-57

100

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE
        MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQE

Query:  NELV
        NELV
Subjt:  NELV

A0A6J1IST9 LOW QUALITY PROTEIN: homeobox-leucine zipper protein GLABRA 2-like

1.08e-18

72.62

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRS
        MGADMS+NNN    LAFTKDFFSSPALSLTLAGIFRR +  E GDVEMEEVDDG      RD+  T   EVSSENSGPV RSRS
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRS

A0A6J1KAL9 homeobox-leucine zipper protein GLABRA 2 isoform X2

3.12e-19

67.65

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE------EEEEEEG
        M ADMSNNNN    LAFTKDFFSSPALSLTLAGIFRR +  E GDVEMEEVDDGS G  RRD+     AEVSSEN GPV RSRS+++       EE EEG
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE------EEEEEEG

Query:  GG
         G
Subjt:  GG

A0A6J1KCZ9 homeobox-leucine zipper protein GLABRA 2 isoform X1

3.12e-19

67.65

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE------EEEEEEG
        M ADMSNNNN    LAFTKDFFSSPALSLTLAGIFRR +  E GDVEMEEVDDGS G  RRD+     AEVSSEN GPV RSRS+++       EE EEG
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDH-EVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEE------EEEEEEG

Query:  GG
         G
Subjt:  GG

SwissProt top hits

e value

%identity

Alignment

P46607 Homeobox-leucine zipper protein GLABRA 2

3.1e-05

45.05

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEE---------EEEEEE
        M  DMS+          TKDFFSSPALSL+LAGIFR +    G    EE       G R  + +  T E+SSENSGP  RSRSEE         EEEEEE
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEE---------EEEEEE

Query:  EGGGQDDQENE
        +G   +   N+
Subjt:  EGGGQDDQENE

Arabidopsis top hits

e value

%identity

Alignment

AT1G79840.1 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain

2.2e-06

45.05

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEE---------EEEEEE
        M  DMS+          TKDFFSSPALSL+LAGIFR +    G    EE       G R  + +  T E+SSENSGP  RSRSEE         EEEEEE
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEE---------EEEEEE

Query:  EGGGQDDQENE
        +G   +   N+
Subjt:  EGGGQDDQENE

AT1G79840.2 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain

2.2e-06

45.05

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Query:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEE---------EEEEEE
        M  DMS+          TKDFFSSPALSL+LAGIFR +    G    EE       G R  + +  T E+SSENSGP  RSRSEE         EEEEEE
Subjt:  MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEE---------EEEEEE

Query:  EGGGQDDQENE
        +G   +   N+
Subjt:  EGGGQDDQENE

Sequences

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CDS sequence

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ATGGGTGCCGACATGTCCAACAACAACAATACCAATAATCCTCTTGCTTTCACCAAAGACTTCTTCTCTTCTCCGGCTCTTTCTCTTACCCTTGCGGGGATATTTCGACG
GAGTGATCATGAGGTGGGGGATGTGGAGATGGAGGAAGTGGATGACGGGAGCGTGGGTGGAGCCAGGAGAGATAATCATGATACCATGACAGCGGAAGTTAGTAGTGAGA
ATTCGGGACCGGTGGTGAGGTCTAGATCGGAGGAGGAAGAGGAGGAGGAGGAGGAGGGAGGAGGGCAGGATGATCAGGAGAATGAATTAGTA

mRNA sequence

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Protein sequence

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MGADMSNNNNTNNPLAFTKDFFSSPALSLTLAGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQENELV

Cucsat.G15058 (gene) of Cucumber (B10) v3 genome