; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G1509 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1509
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNuclear transcription factor Y subunit
Genome locationctg1000:490497..496738
RNA-Seq ExpressionCucsat.G1509
SyntenyCucsat.G1509
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449708.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]1.22e-22997.07Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
        MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_008449711.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]2.54e-22395.6Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
        MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLEL     ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_011657641.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus]1.19e-236100Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
        MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_011657643.1 nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus]2.48e-23098.53Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
        MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLEL     ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_031743006.1 nuclear transcription factor Y subunit A-1 isoform X3 [Cucumis sativus]5.00e-22797.65Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
        MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSI        DPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

TrEMBL top hitse value%identityAlignment
A0A0A0KEL9 Nuclear transcription factor Y subunit5.74e-237100Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
        MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A1S3BNK4 Nuclear transcription factor Y subunit5.89e-23097.07Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
        MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A1S4DXQ9 Nuclear transcription factor Y subunit1.23e-22395.6Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS
        MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLEL     ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A6J1FTP1 Nuclear transcription factor Y subunit2.58e-21391.55Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA-SFGQVQHNCQHAV
        MQSK +SVNQLESEPPNMQQTSS+SEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASESNDG SMSNDDLNE+DDD+TTKDSHA S+GQVQ+N QHAV
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA-SFGQVQHNCQHAV

Query:  SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        SAAP VH GCITQPPQLELVGHSIACASN YQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+
Subjt:  SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNE NS  STMK+KDSGSGQA SSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAY+ARSY+NGS QFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK
        YSSFQASSY LRSGERGDDGDCSGQQR SISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK

A0A6J1JHB5 Nuclear transcription factor Y subunit7.72e-21591.84Show/hide
Query:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA-SFGQVQHNCQHAV
        MQSK +SVNQLESEPPNMQQTSS+SEPWWRSIGYNHIS PAAGGN+SNSTSLEC NGASESNDG SMSNDDLNE+DDD+TTKDSHA S+GQVQ+NCQHAV
Subjt:  MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA-SFGQVQHNCQHAV

Query:  SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        SAAP VH GCITQPPQLELVGHSIACASN YQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+
Subjt:  SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+K+KDSGSGQA SSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAYEARSY+NGS QFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK
        YSSFQASSY LRSGERGDDGDCSGQQR SISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-77.0e-2246.43Show/hide
Query:  HSIACASNPYQDPYYAGVMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG
        +S+A    PY DPYY  + A     +   +   +G+    + LP +  +EPVFVNAKQY GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG
Subjt:  HSIACASNPYQDPYYAGVMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG

Query:  SGGRF--AKKNETNSLGSTMKDKDS-GSGQAISSHSAGSS
         GGRF  AKK + +   S+ ++K +  +G++  + S+G+S
Subjt:  SGGRF--AKKNETNSLGSTMKDKDS-GSGQAISSHSAGSS

Q8VY64 Nuclear transcription factor Y subunit A-43.5e-2149.22Show/hide
Query:  PYQDPYYAGVMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF
        PY DPYY  V A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRRRQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF
Subjt:  PYQDPYYAGVMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF

Query:  --AKKNETNSLGSTMKDKDSGSGQAISS
          AKK   +         D  + +A SS
Subjt:  --AKKNETNSLGSTMKDKDSGSGQAISS

Q945M9 Nuclear transcription factor Y subunit A-91.3e-4745.82Show/hide
Query:  MQSKSKS-VNQLESEPPNMQQTSSFS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQH
        M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D N  + +     S  S G      Q 
Subjt:  MQSKSKS-VNQLESEPPNMQQTSSFS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQH

Query:  AVSAAPIVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK
        +      +H G    PP  +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E K
Subjt:  AVSAAPIVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK

Query:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSS
        LIK RKPYLHESRHQHAMRR RG+GGRFAKK  TN+  S  K ++  +G    S S  SS SD       E W                       NG  
Subjt:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSS

Query:  QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK
        +       Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Subjt:  QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK

Q9LXV5 Nuclear transcription factor Y subunit A-12.9e-5250Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA---SFGQVQHNCQ
        MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A   S     H  +
Subjt:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA---SFGQVQHNCQ

Query:  HAVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
            A  I  +H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  HAVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGS+       ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS

Q9SYH4 Nuclear transcription factor Y subunit A-58.5e-2034.1Show/hide
Query:  SFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVGHSIACAS----NPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGIL
        + G+   N   +++ + +V    +   P    +  S+ CA     N +  P YA    A  H       +G+  +R+ LP  + + EP+FVNAKQY  IL
Subjt:  SFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVGHSIACAS----NPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGIL

Query:  RRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQ--AISSHSAGS--SGSDAAPCALAETWNSSNGQQES
        RRR+ RAK E +NKLIK RKPYLHESRH HA++RARGSGGRF    +     +++      +GQ  ++S H  GS    S  +P + +   N     Q  
Subjt:  RRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQ--AISSHSAGS--SGSDAAPCALAETWNSSNGQQES

Query:  RTQLHEAYEARSYMNGS
         +     + A + M+G+
Subjt:  RTQLHEAYEARSYMNGS

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A98.9e-4945.82Show/hide
Query:  MQSKSKS-VNQLESEPPNMQQTSSFS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQH
        M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D N  + +     S  S G      Q 
Subjt:  MQSKSKS-VNQLESEPPNMQQTSSFS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQH

Query:  AVSAAPIVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK
        +      +H G    PP  +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E K
Subjt:  AVSAAPIVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK

Query:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSS
        LIK RKPYLHESRHQHAMRR RG+GGRFAKK  TN+  S  K ++  +G    S S  SS SD       E W                       NG  
Subjt:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSS

Query:  QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK
        +       Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Subjt:  QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK

AT5G12840.1 nuclear factor Y, subunit A12.1e-5350Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA---SFGQVQHNCQ
        MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A   S     H  +
Subjt:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA---SFGQVQHNCQ

Query:  HAVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
            A  I  +H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  HAVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGS+       ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS

AT5G12840.2 nuclear factor Y, subunit A11.2e-5350.18Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA--SFGQVQHNCQH
        MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S     H  + 
Subjt:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA--SFGQVQHNCQH

Query:  AVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN
           A  I  +H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E 
Subjt:  AVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN

Query:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS
        K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGS+       ET NSS
Subjt:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS

AT5G12840.3 nuclear factor Y, subunit A12.1e-5350Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA---SFGQVQHNCQ
        MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A   S     H  +
Subjt:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA---SFGQVQHNCQ

Query:  HAVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
            A  I  +H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  HAVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGS+       ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS

AT5G12840.4 nuclear factor Y, subunit A11.2e-5350.18Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA--SFGQVQHNCQH
        MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S     H  + 
Subjt:  MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHA--SFGQVQHNCQH

Query:  AVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN
           A  I  +H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E 
Subjt:  AVSAAPI--VHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN

Query:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS
        K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGS+       ET NSS
Subjt:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTTTTCAGAACCTTGGTGGCGTAGTATTGGGTACAATCATAT
CTCTCCGCCTGCAGCTGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATG
AAGAAGATGATGATGAGACCACAAAAGATTCACATGCAAGTTTTGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCACCTATAGTGCATAGTGGATGTATC
ACGCAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTACGCGGGAGTGATGGCTGCCTATGGGCATCAACCGGG
TTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCATTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCTAAACAATATCAAGGGATTCTAAGGCGAA
GACAGGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGA
GGACGATTTGCCAAGAAAAATGAAACTAATTCCTTGGGTTCTACTATGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGCTC
TGATGCAGCACCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAATCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATATGAATGGAA
GTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTACGATCTGGTGAGAGAGGTGATGATGGAGACTGCTCAGGACAGCAGCGAAGTATCTCAGAA
AATCAAGCTGCACAGAGGCGTCTTGCCATCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTTTTCAGAACCTTGGTGGCGTAGTATTGGGTACAATCATAT
CTCTCCGCCTGCAGCTGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATG
AAGAAGATGATGATGAGACCACAAAAGATTCACATGCAAGTTTTGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCACCTATAGTGCATAGTGGATGTATC
ACGCAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTACGCGGGAGTGATGGCTGCCTATGGGCATCAACCGGG
TTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCATTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCTAAACAATATCAAGGGATTCTAAGGCGAA
GACAGGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGA
GGACGATTTGCCAAGAAAAATGAAACTAATTCCTTGGGTTCTACTATGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGCTC
TGATGCAGCACCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAATCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATATGAATGGAA
GTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTACGATCTGGTGAGAGAGGTGATGATGGAGACTGCTCAGGACAGCAGCGAAGTATCTCAGAA
AATCAAGCTGCACAGAGGCGTCTTGCCATCAAGTGA
Protein sequenceShow/hide protein sequence
MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCI
TQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSG
GRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISE
NQAAQRRLAIK