CuGenDBv2

Gene ID	Cucsat.G15106
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	F-box protein
Genome location	ctg197:761519..762390
RNA-Seq Expression	Cucsat.G15106
Synteny	Cucsat.G15106
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0050285.1 F-box protein [Cucumis melo var. makuwa]

1.47e-90

93.53

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Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRGSFPRI+LDYHFNMEDVMLDCRQGPGY+YKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNA PLIA 
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK
        +KLCPTLERLFVTFDPESY ISSTDK+VRLEQL+VVI K
Subjt:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK

XP_004147720.1 F-box protein At2g39490 [Cucumis sativus]

6.46e-94

98.56

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Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFN KPLIAI
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK
        IKLCPTLERLFVTFDPESY ISSTDKEVRLEQLKVVILK
Subjt:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK

XP_008461636.1 PREDICTED: F-box protein At2g39490-like isoform X1 [Cucumis melo]

6.36e-90

93.53

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Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRGSFPRI+LDYHFNMEDVMLDCRQGPGY+YKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNA PLIA 
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK
        +KLCPTLERLFVTFDPESY ISSTDK+VRLEQL+VVI K
Subjt:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK

XP_022993757.1 F-box protein At2g39490-like [Cucurbita maxima]

3.13e-74

75.34

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Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRG FP ++LD HFNMEDVMLDCRQGPGY+YKSNEFDP LL VKN  TLT+CKW FEALIFPSLSWNF+FYKLKELWWIDD KENFNA  L++ 
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCISS-------TDKEVRLEQLKVVILK
        +KLCP LERLFVTFDP+SYC+ S       TD + R+ QLKVVILK
Subjt:  IKLCPTLERLFVTFDPESYCISS-------TDKEVRLEQLKVVILK

XP_038892729.1 F-box protein At2g39490-like [Benincasa hispida]

9.70e-77

80.14

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Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRG FP I+LDYHFNMEDVMLDCRQG GY+YKSNEFDPILLTVKN ETLT+CKWTFEALIFPSLSWNF+FYKLKELWWIDD KE+FNA PLIA 
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCIS-------STDKEVRLEQLKVVILK
        + LCP LERLF+TFD ESY IS       +T+ EVRL QLKVVILK
Subjt:  IKLCPTLERLFVTFDPESYCIS-------STDKEVRLEQLKVVILK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQ78 F-box domain-containing protein

3.13e-94

98.56

Show/hide

Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFN KPLIAI
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK
        IKLCPTLERLFVTFDPESY ISSTDKEVRLEQLKVVILK
Subjt:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK

A0A1S3CEY7 F-box protein At2g39490-like isoform X2

2.90e-74

82.73

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Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRGSFPRI+LDYHFNMEDVMLDCRQGPGY+YKSNEFDPILLTVKNAETLTICKWTFE               LKELWWIDDLKENFNA PLIA 
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK
        +KLCPTLERLFVTFDPESY ISSTDK+VRLEQL+VVI K
Subjt:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK

A0A1S3CGG6 F-box protein At2g39490-like isoform X1

3.08e-90

93.53

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Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRGSFPRI+LDYHFNMEDVMLDCRQGPGY+YKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNA PLIA 
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK
        +KLCPTLERLFVTFDPESY ISSTDK+VRLEQL+VVI K
Subjt:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK

A0A5A7U9K8 F-box protein

7.14e-91

93.53

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Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRGSFPRI+LDYHFNMEDVMLDCRQGPGY+YKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNA PLIA 
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK
        +KLCPTLERLFVTFDPESY ISSTDK+VRLEQL+VVI K
Subjt:  IKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVILK

A0A6J1JTR5 F-box protein At2g39490-like

1.51e-74

75.34

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Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI
        KLRSFRYRG FP ++LD HFNMEDVMLDCRQGPGY+YKSNEFDP LL VKN  TLT+CKW FEALIFPSLSWNF+FYKLKELWWIDD KENFNA  L++ 
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAI

Query:  IKLCPTLERLFVTFDPESYCISS-------TDKEVRLEQLKVVILK
        +KLCP LERLFVTFDP+SYC+ S       TD + R+ QLKVVILK
Subjt:  IKLCPTLERLFVTFDPESYCISS-------TDKEVRLEQLKVVILK

SwissProt top hits

e value

%identity

Alignment

Q5S4V7 F-box protein At2g39490

9.1e-29

42.86

Show/hide

Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSL--SW-NFQFYKLKELWWIDDLKENFNAKPL
        KL++F Y+GS P I++  HFN+   + D  QGP Y   + +  P+ LT+KN+++LT+C+W FE +I PS+  SW +FQFYKL+EL WID+         L
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSL--SW-NFQFYKLKELWWIDDLKENFNAKPL

Query:  IAIIKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVI
        I+ +KLCP++ERLF+T D  +Y  S+ +  V  +  +VV+
Subjt:  IAIIKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVI

Arabidopsis top hits

e value

%identity

Alignment

AT2G39490.1 F-box family protein

6.5e-30

42.86

Show/hide

Query:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSL--SW-NFQFYKLKELWWIDDLKENFNAKPL
        KL++F Y+GS P I++  HFN+   + D  QGP Y   + +  P+ LT+KN+++LT+C+W FE +I PS+  SW +FQFYKL+EL WID+         L
Subjt:  KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSL--SW-NFQFYKLKELWWIDDLKENFNAKPL

Query:  IAIIKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVI
        I+ +KLCP++ERLF+T D  +Y  S+ +  V  +  +VV+
Subjt:  IAIIKLCPTLERLFVTFDPESYCISSTDKEVRLEQLKVVI

Sequences

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CDS sequence

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AAACTCCGGTCGTTTCGATATAGAGGGTCGTTTCCTCGCATTCAACTTGATTATCATTTTAACATGGAAGATGTTATGCTTGACTGCAGACAAGGTCCTGGATACCTGTA
TAAGAGTAATGAGTTTGATCCAATTTTGTTGACAGTGAAGAATGCCGAAACACTCACCATATGTAAATGGACTTTTGAGGCTTTGATATTTCCTTCTCTTTCTTGGAACT
TCCAGTTCTATAAGTTGAAAGAGTTGTGGTGGATTGATGATTTAAAAGAAAACTTCAATGCCAAACCATTGATTGCTATCATCAAATTATGTCCTACTTTGGAACGTCTA
TTTGTTACGTTTGATCCTGAAAGTTACTGCATTTCAAGCACAGACAAAGAAGTTCGACTCGAGCAACTCAAAGTTGTAATCTTGAAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

KLRSFRYRGSFPRIQLDYHFNMEDVMLDCRQGPGYLYKSNEFDPILLTVKNAETLTICKWTFEALIFPSLSWNFQFYKLKELWWIDDLKENFNAKPLIAIIKLCPTLERL
FVTFDPESYCISSTDKEVRLEQLKVVILK

Cucsat.G15106 (gene) of Cucumber (B10) v3 genome