; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G15110 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15110
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Genome locationctg197:862856..868197
RNA-Seq ExpressionCucsat.G15110
SyntenyCucsat.G15110
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647986.1 hypothetical protein Csa_021399 [Cucumis sativus]2.32e-164100Show/hide
Query:  GGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQM
        GGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQM
Subjt:  GGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQM

Query:  RQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQ
        RQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQ
Subjt:  RQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQ

Query:  NGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
        NGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
Subjt:  NGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

XP_008461655.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo]8.08e-17293.82Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGG      GGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
Subjt:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
        GRRH DYPESPRGAPRERDVERSRQVYSPGYDNADEH QNGNGYHDKS   E +D  R NWR+SPGRTSRSPSGS
Subjt:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

XP_031741884.1 LOW QUALITY PROTEIN: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis sativus]1.35e-17895.32Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYG---RRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFA
        MRRYSPPYHSPPRRGYGGRGRSPPG GYGGG      GGGGGG      RREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFA
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYG---RRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFA

Query:  FVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYS
        FVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYS
Subjt:  FVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYS

Query:  VSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
        VSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
Subjt:  VSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

XP_038892246.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida]5.94e-16691.37Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGG   GGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYG---RSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYS
        FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYG   RSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYS
Subjt:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYG---RSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYS

Query:  VSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
        VSP RRH DYPESPRG PRERD ER+RQVYSPGYDNAD+H  NGNGYHDKS + E +D  R NWR+SPGRTSRSPSGS
Subjt:  VSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

XP_038892248.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispida]3.93e-16892.36Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGG   GGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
Subjt:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
         RRH DYPESPRG PRERD ER+RQVYSPGYDNAD+H  NGNGYHDKS + E +D  R NWR+SPGRTSRSPSGS
Subjt:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

TrEMBL top hitse value%identityAlignment
A0A0A0KNV5 RRM domain-containing protein4.02e-18799.27Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGG  GGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
Subjt:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
        GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
Subjt:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

A0A1S3CFP8 serine/arginine-rich SC35-like splicing factor SCL303.91e-17293.82Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGG      GGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
Subjt:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
        GRRH DYPESPRGAPRERDVERSRQVYSPGYDNADEH QNGNGYHDKS   E +D  R NWR+SPGRTSRSPSGS
Subjt:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

A0A6J1CBL6 serine/arginine-rich SC35-like splicing factor SCL304.97e-15886.83Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGG      GGGGGGYGRRREQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSYSPAPRWRGDYSVSP
Subjt:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTS------RSPSGS
         RRH DYP SPRGAP ERD ERS+Q YSPGYDNAD H  +GNGYHDKS + E  D +R NWR+SPGR S      RSPSGS
Subjt:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTS------RSPSGS

A0A6J1H0N2 serine/arginine-rich SC35-like splicing factor SCL302.31e-15787.36Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYG        GGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        FVDPYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP
Subjt:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNAD--EHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
         RRH DYP SPRGA RERD ER+RQVYSPGYDNAD  +   NGNGYHDK P+ E +D  R NWR SP RTSRSPSGS
Subjt:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNAD--EHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

A0A6J1JIZ1 serine/arginine-rich SC35-like splicing factor SCL305.03e-16089.53Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGG   GGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        FVDPYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP
Subjt:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNAD--EHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
         RRH DYP SPRGA RERD ERSRQVYSPGYDNAD  +   NGNGYHDK P+ E +D  R NWR SP RTSRSPSGS
Subjt:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNAD--EHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL284.5e-2038.89Show/hide
Query:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRG
        R YS  P   SPP  R+GY        P  R +   G  G                   LL+RN+P+D RP +LR  FERFG ++D+Y+P++YYTGEPRG
Subjt:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRG

Query:  FAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGD
        F FV++    +A+EA   MN K   GREI +V A E+RK P++MR       +G  GR   Y R+  RS  R    R+ S SRSR   R  S   + R D
Subjt:  FAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGD

Query:  YSVSPGRRHTDYPESPRGAPRERDVERSRQVYSP
           SP RR      SP   PR     +SR   SP
Subjt:  YSVSPGRRHTDYPESPRGAPRERDVERSRQVYSP

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL304.7e-7060.21Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGF
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG          RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+G+PRGF
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGF

Query:  AFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGD
        AFVEFVD Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRSRSYSPAPR RG 
Subjt:  AFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGD

Query:  YSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDN----ADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
                       PRG   E D   SR+ YSPGY+     A +  +NG+    + P  E +D      R      SRSPSGS
Subjt:  YSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDN----ADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS

Q9BRL6 Serine/arginine-rich splicing factor 86.4e-1936.59Show/hide
Query:  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GY
        +L V N+     P+ LR  FE++G V DVYIP++ +T  PRGFAFV F D  +A +A+  M+G +  GRE+ V +A   R+   + RQ   RG S   GY
Subjt:  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GY

Query:  GGRRSHYGR----SRSRSVSRSRSPR-HPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR----HTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNG
        G R   YGR     R R  SRSR P    S SRSRYR   YS +P  R  YS S   R     + Y ES  G         S   YS  Y ++  H ++G
Subjt:  GGRRSHYGR----SRSRSVSRSRSPR-HPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR----HTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNG

Query:  NGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGSDPALLMHPPDMV
        +    +S S       R   R+     SRS S S  + +   P  V
Subjt:  NGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGSDPALLMHPPDMV

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A1.5e-3146.05Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF
        R Y+P   SPP RGYG RGRSP  RG  GG               R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY-SPAPRWRGDYSVSP
        +DP +A+EA++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +     SVSP
Subjt:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY-SPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAP
          R  +   S   +P
Subjt:  GRRHTDYPESPRGAP

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL338.7e-3243.12Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF
        R Y+P   SPP RGYG RGRSP  RG  G              GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSP
        +DP +A++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP
Subjt:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRT-SRSPSGS
             D   S   +P   D  R R + +P    +     +      +SP        + N   SP R+ SRSP  S
Subjt:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRT-SRSPSGS

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 336.2e-3343.12Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF
        R Y+P   SPP RGYG RGRSP  RG  G              GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSP
        +DP +A++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP
Subjt:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRT-SRSPSGS
             D   S   +P   D  R R + +P    +     +      +SP        + N   SP R+ SRSP  S
Subjt:  GRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRT-SRSPSGS

AT1G55310.2 SC35-like splicing factor 334.3e-3448.84Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF
        R Y+P   SPP RGYG RGRSP  RG  G              GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSP
        +DP +A++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP
Subjt:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSP

Query:  GRRHTD----YPESP
             D    Y  SP
Subjt:  GRRHTD----YPESP

AT1G55310.3 SC35-like splicing factor 334.0e-3242.96Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG----------
        R Y+P   SPP RGYG RGRSP  RG  G              GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG          
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG----------

Query:  --EPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPA
          +PRGF FV+F+DP +A++A++HM+G    GRE+TVV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P   RSR RS      
Subjt:  --EPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPA

Query:  PRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPS
            GDY   P RRH     SPR    ER   R     SP  D +   G++      KS S+       ++   SP R SRSPS
Subjt:  PRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPS

AT3G13570.1 SC35-like splicing factor 30A1.0e-3246.05Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF
        R Y+P   SPP RGYG RGRSP  RG  GG               R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY-SPAPRWRGDYSVSP
        +DP +A+EA++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +     SVSP
Subjt:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY-SPAPRWRGDYSVSP

Query:  GRRHTDYPESPRGAP
          R  +   S   +P
Subjt:  GRRHTDYPESPRGAP

AT3G55460.1 SC35-like splicing factor 303.3e-7160.21Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGF
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG          RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+G+PRGF
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGF

Query:  AFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGD
        AFVEFVD Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRSRSYSPAPR RG 
Subjt:  AFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGD

Query:  YSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDN----ADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS
                       PRG   E D   SR+ YSPGY+     A +  +NG+    + P  E +D      R      SRSPSGS
Subjt:  YSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDN----ADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGCGGTGGCGGTGGCGGTGGAGGTGG
CGGTGGCGGTGGTGGTGGGTATGGAAGGCGAAGGGAACAACCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCATTTG
AGAGGTTTGGACTTGTTCGAGACGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCT
CAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACC
ATCTGGCTATGGTGGACGCCGTTCTCATTATGGACGTTCTAGATCACGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAA
GGTCTTACTCTCCAGCTCCAAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACACAGATTACCCTGAATCACCTAGGGGTGCTCCTCGTGAGCGAGATGTT
GAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGGTCAGAATGGAAATGGATATCACGACAAGTCACCTTCGGTAGAACATCAAGATCACCT
TCGGGTTAATTGGAGGGCGTCTCCTGGTAGAACATCAAGATCACCTTCGGGGTCCGATCCCGCTCTGCTGATGCATCCCCCAGACATGGTAGATGATTTTTCTTTGAGAA
ATATGACAGTAGTAGATGATGTAAACCATCTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGCGGTGGCGGTGGCGGTGGAGGTGG
CGGTGGCGGTGGTGGTGGGTATGGAAGGCGAAGGGAACAACCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCATTTG
AGAGGTTTGGACTTGTTCGAGACGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCT
CAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACC
ATCTGGCTATGGTGGACGCCGTTCTCATTATGGACGTTCTAGATCACGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAA
GGTCTTACTCTCCAGCTCCAAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACACAGATTACCCTGAATCACCTAGGGGTGCTCCTCGTGAGCGAGATGTT
GAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGGTCAGAATGGAAATGGATATCACGACAAGTCACCTTCGGTAGAACATCAAGATCACCT
TCGGGTTAATTGGAGGGCGTCTCCTGGTAGAACATCAAGATCACCTTCGGGGTCCGATCCCGCTCTGCTGATGCATCCCCCAGACATGGTAGATGATTTTTCTTTGAGAA
ATATGACAGTAGTAGATGATGTAAACCATCTTTTCTAA
Protein sequenceShow/hide protein sequence
MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEA
QYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDV
ERSRQVYSPGYDNADEHGQNGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGSDPALLMHPPDMVDDFSLRNMTVVDDVNHLF