CuGenDBv2

Gene ID	Cucsat.G15332
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	CBS domain-containing protein CBSX1, chloroplastic-like
Genome location	ctg2009:1314064..1317903
RNA-Seq Expression	Cucsat.G15332
Synteny	Cucsat.G15332
Gene Ontology terms	NA
InterPro domains	IPR000644 - CBS domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7014971.1 CBS domain-containing protein CBSX1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

9.54e-59

80.65

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        MSSISLSNSH L R YPHHL HS       +PL S+NSLSKL RFGISDR+ +RPPLPLV ASSGAGVV SFP+RGTYTVGDFMTRKENLYVVKPTTT D
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EALEVLVEKRITGFPVVDDDWNLV
        EALE LVEKRITGFPVVD+DWNLV
Subjt:  EALEVLVEKRITGFPVVDDDWNLV

XP_004140707.1 CBS domain-containing protein CBSX1, chloroplastic [Cucumis sativus]

9.26e-82

100

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EALEVLVEKRITGFPVVDDDWNLV
        EALEVLVEKRITGFPVVDDDWNLV
Subjt:  EALEVLVEKRITGFPVVDDDWNLV

XP_008456144.1 PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo]

1.75e-79

97.58

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        M+SISLSNSH LARPYPHHLPHSHRQQWCSRPLLS+NSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EALEVLVEKRITGFPVVDDDWNLV
        EALEVLVEKRITGFPVVDDDWNLV
Subjt:  EALEVLVEKRITGFPVVDDDWNLV

XP_022984710.1 CBS domain-containing protein CBSX2, chloroplastic-like isoform X2 [Cucurbita maxima]

2.95e-60

81.45

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        MSSISLSNSH LAR YPHHL HS    W  +PL S+N LSKL RFGISDR+  RPPLPLVLASSGA VV SFP+RGTYTVGDFMTRKENLYVVKPTTT D
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EALEVLVEKRITGFPVVDDDWNLV
        EALE LVEKRITGFPVVD+DWNLV
Subjt:  EALEVLVEKRITGFPVVDDDWNLV

XP_038894434.1 CBS domain-containing protein CBSX2, chloroplastic-like [Benincasa hispida]

1.43e-73

92.74

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        MSSISLSNSH LAR YPHHLPHS RQQWC RPLLS+NSLSKL RFGISDR+ ARPPLPLVLASSGAGVVDSFP+RGTYTVGDFMTRKENLYVVKPTTTVD
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EALEVLVEKRITGFPVVDDDWNLV
        EALEVLVEKRITGFPVVDDDWNLV
Subjt:  EALEVLVEKRITGFPVVDDDWNLV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L716 Uncharacterized protein

4.48e-82

100

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EALEVLVEKRITGFPVVDDDWNLV
        EALEVLVEKRITGFPVVDDDWNLV
Subjt:  EALEVLVEKRITGFPVVDDDWNLV

A0A1S3C251 CBS domain-containing protein CBSX1, chloroplastic-like

8.45e-80

97.58

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        M+SISLSNSH LARPYPHHLPHSHRQQWCSRPLLS+NSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EALEVLVEKRITGFPVVDDDWNLV
        EALEVLVEKRITGFPVVDDDWNLV
Subjt:  EALEVLVEKRITGFPVVDDDWNLV

A0A5A7T6Y9 CBS domain-containing protein CBSX1

8.45e-80

97.58

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        M+SISLSNSH LARPYPHHLPHSHRQQWCSRPLLS+NSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EALEVLVEKRITGFPVVDDDWNLV
        EALEVLVEKRITGFPVVDDDWNLV
Subjt:  EALEVLVEKRITGFPVVDDDWNLV

A0A6J1J9C6 CBS domain-containing protein CBSX2, chloroplastic-like isoform X2

1.43e-60

81.45

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        MSSISLSNSH LAR YPHHL HS    W  +PL S+N LSKL RFGISDR+  RPPLPLVLASSGA VV SFP+RGTYTVGDFMTRKENLYVVKPTTT D
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EALEVLVEKRITGFPVVDDDWNLV
        EALE LVEKRITGFPVVD+DWNLV
Subjt:  EALEVLVEKRITGFPVVDDDWNLV

A0A6J1JBB9 CBS domain-containing protein CBSX2, chloroplastic-like isoform X1

4.33e-58

78.29

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Query:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD
        MSSISLSNSH LAR YPHHL HS    W  +PL S+N LSKL RFGISDR+  RPPLPLVLASSGA VV SFP+RGTYTVGDFMTRKENLYVVKPTTT D
Subjt:  MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVD

Query:  EA-----LEVLVEKRITGFPVVDDDWNLV
        EA     LE LVEKRITGFPVVD+DWNLV
Subjt:  EA-----LEVLVEKRITGFPVVDDDWNLV

SwissProt top hits

e value

%identity

Alignment

O23193 CBS domain-containing protein CBSX1, chloroplastic

5.5e-21

54.95

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Query:  SLSKLHRFGISDRFPARPPLPLVLASSGAGVV--DSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDDWNLVVL
        S+   H+F  S  FP++  +P   +++G+ ++   S P  G YTVG+FMT+KE+L+VVKPTTTVDEALE+LVE RITGFPV+D+DW LV L
Subjt:  SLSKLHRFGISDRFPARPPLPLVLASSGAGVV--DSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDDWNLVVL

Q9C5D0 CBS domain-containing protein CBSX2, chloroplastic

1.2e-15

44.44

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Query:  MSSISLSNSHPLAR-PYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLR-GTYTVGDFMTRKENLYVVKPTTT
        M SISLSNS P+ R P    L H   Q +      S + L   +R   S   P+        A +     +S P + G YTVGDFMT ++NL+VVKP+T+
Subjt:  MSSISLSNSHPLAR-PYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLR-GTYTVGDFMTRKENLYVVKPTTT

Query:  VDEALEVLVEKRITGFPVVDDDWNLV
        VD+ALE+LVEK++TG PV+DD+W LV
Subjt:  VDEALEVLVEKRITGFPVVDDDWNLV

Arabidopsis top hits

e value

%identity

Alignment

AT4G34120.1 Cystathionine beta-synthase (CBS) family protein

8.4e-17

44.44

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Query:  MSSISLSNSHPLAR-PYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLR-GTYTVGDFMTRKENLYVVKPTTT
        M SISLSNS P+ R P    L H   Q +      S + L   +R   S   P+        A +     +S P + G YTVGDFMT ++NL+VVKP+T+
Subjt:  MSSISLSNSHPLAR-PYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLR-GTYTVGDFMTRKENLYVVKPTTT

Query:  VDEALEVLVEKRITGFPVVDDDWNLV
        VD+ALE+LVEK++TG PV+DD+W LV
Subjt:  VDEALEVLVEKRITGFPVVDDDWNLV

AT4G36910.1 Cystathionine beta-synthase (CBS) family protein

3.9e-22

54.95

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Query:  SLSKLHRFGISDRFPARPPLPLVLASSGAGVV--DSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDDWNLVVL
        S+   H+F  S  FP++  +P   +++G+ ++   S P  G YTVG+FMT+KE+L+VVKPTTTVDEALE+LVE RITGFPV+D+DW LV L
Subjt:  SLSKLHRFGISDRFPARPPLPLVLASSGAGVV--DSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDDWNLVVL

Sequences

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CDS sequence

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CAATCATCTAGCAAAATGAGCTCCATCTCTCTCTCCAATTCACATCCTCTTGCGCGCCCTTATCCTCATCATCTTCCTCACTCTCACCGTCAACAATGGTGCTCCCGCCC
TCTGCTTTCGACCAATTCTCTTTCTAAGCTACACCGGTTTGGGATCTCCGACCGATTCCCCGCTCGACCTCCCTTGCCTTTGGTTCTTGCTTCTTCTGGAGCTGGCGTCG
TTGATTCCTTTCCGCTCAGAGGAACATATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTATATGTTGTTAAACCTACAACAACAGTTGATGAAGCATTAGAGGTC
TTGGTGGAAAAGAGAATAACTGGCTTTCCTGTTGTCGATGATGATTGGAATCTGGTGGTACTCAGAGTGATACCAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAGTA
TGTAAGCAGTGCCATTTATCTTCTGGTTATTTGCCCTCTTTTTTTTTTTTTCACAAACATGAGGATTTTTAACAAAAACACCCTCAGAAAACGTGATCAATCCACTGTTT
GGATTGGTTTTCAGCTGTGTGAACCCAAATCAGCAGAAAGTTTTGTTTTGTTTTTTGTTTTAAATAATTTTTTTACTCCAGAATATTGTTCTCAGACCCTTTTGGAAAGT
ACTCCAAAATATTGTTTGATTGATCTTTGGAGTACTCATTTTCAAAAAATGAAATATTTATTGATACATTGA

mRNA sequence

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Protein sequence

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QSSSKMSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEV
LVEKRITGFPVVDDDWNLVVLRVIPICFLMWIVRGKYVSSAIYLLVICPLFFFFTNMRIFNKNTLRKRDQSTVWIGFQLCEPKSAESFVLFFVLNNFFTPEYCSQTLLES
TPKYCLIDLWSTHFQKMKYLLIH

Cucsat.G15332 (gene) of Cucumber (B10) v3 genome