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Cucsat.G15334 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15334
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSWIM-type domain-containing protein
Genome locationctg2009:1391913..1394771
RNA-Seq ExpressionCucsat.G15334
SyntenyCucsat.G15334
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046135.1 uncharacterized protein E6C27_scaffold157G00750 [Cucumis melo var. makuwa]1.40e-2438.82Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA
        M+KL I VFHSGQWD+   Y++YKT  VLVD +   F+ FV+LI  E++ +   S I+LS++L  G   +Q V++I ++KDVTWFL+LVK Q T++ LVA
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA

Query:  HSI----------DTILDVSIGSSSSLV-ETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        H+I           +++D  + +  SL+  + +  +  +  D+ +++ ++     KEKD+F SKE+L K+
Subjt:  HSI----------DTILDVSIGSSSSLV-ETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]2.95e-7380.38Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIESCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVAHSI
        MVKLA+ VFHSGQWDEQQ YVDYKTNCVLVD V SSFD FVNLI TEIQ+ESCIELSVLLPIG NGVQHVLKIV+NKDVTWFLTLVKDQSTQY LVAHS+
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIESCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVAHSI

Query:  DTILDVSIGSS--SSLVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        +T+LD S+GSS  SS+VE DLG EL +FRDVDITN + + + FKEKDLFCSKEILLK+
Subjt:  DTILDVSIGSS--SSLVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]1.08e-7279.75Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIESCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVAHSI
        MVKLA+ VFHSGQWDEQQ YVDYKTNCVLVD V SSFD FVNLI TEIQ+ESCIELSVLLPIG N VQHVLKIV+NKDVTWFLTLVKDQSTQY LVAHS+
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIESCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVAHSI

Query:  DTILDVSIGSS--SSLVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        +T+LD S+GSS  SS+VE DLG EL +FRDVDITN + + + FKEKDLFCSKEILLK+
Subjt:  DTILDVSIGSS--SSLVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

TYJ98376.1 uncharacterized protein E5676_scaffold232G001130 [Cucumis melo var. makuwa]6.69e-2540.59Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA
        M+KL I VFHSGQWD+   Y++YKT  VLVD + S F+ FV+LI  E+  +   S I+LS+LL  G   +Q V++I ++KDVTWFL+LVK Q T++ LVA
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA

Query:  HSIDTILDVSIGSSSS-----------LVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        H+I  + D+ +  SS            L  + +  +  +  D+ +++ ++     KEKD+F SKE+L K+
Subjt:  HSIDTILDVSIGSSSS-----------LVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

TYK27852.1 Mutator-like transposase [Cucumis melo var. makuwa]1.77e-2439.41Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA
        M+KL I VFHSGQWD+   Y++YKT  VLVD + S F+ FV+LI  E++ +   S I+LS+LL  G   +Q+V++I ++KDVTWFL+LVK   T++ LVA
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA

Query:  HSI----------DTILDVSIGSSSSLV-ETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        H+I           +++D  + +  SL+  + +  +  +  D+ +++ ++     KEKD+F SKE+L K+
Subjt:  HSI----------DTILDVSIGSSSSLV-ETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

TrEMBL top hitse value%identityAlignment
A0A5A7TXI0 DBD_Tnp_Mut domain-containing protein6.77e-2538.82Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA
        M+KL I VFHSGQWD+   Y++YKT  VLVD +   F+ FV+LI  E++ +   S I+LS++L  G   +Q V++I ++KDVTWFL+LVK Q T++ LVA
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA

Query:  HSI----------DTILDVSIGSSSSLV-ETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        H+I           +++D  + +  SL+  + +  +  +  D+ +++ ++     KEKD+F SKE+L K+
Subjt:  HSI----------DTILDVSIGSSSSLV-ETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

A0A5A7V6N4 SWIM-type domain-containing protein1.43e-7380.38Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIESCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVAHSI
        MVKLA+ VFHSGQWDEQQ YVDYKTNCVLVD V SSFD FVNLI TEIQ+ESCIELSVLLPIG NGVQHVLKIV+NKDVTWFLTLVKDQSTQY LVAHS+
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIESCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVAHSI

Query:  DTILDVSIGSS--SSLVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        +T+LD S+GSS  SS+VE DLG EL +FRDVDITN + + + FKEKDLFCSKEILLK+
Subjt:  DTILDVSIGSS--SSLVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

A0A5D3BD68 SWIM-type domain-containing protein5.24e-7379.75Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIESCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVAHSI
        MVKLA+ VFHSGQWDEQQ YVDYKTNCVLVD V SSFD FVNLI TEIQ+ESCIELSVLLPIG N VQHVLKIV+NKDVTWFLTLVKDQSTQY LVAHS+
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIESCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVAHSI

Query:  DTILDVSIGSS--SSLVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        +T+LD S+GSS  SS+VE DLG EL +FRDVDITN + + + FKEKDLFCSKEILLK+
Subjt:  DTILDVSIGSS--SSLVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

A0A5D3BH55 DBD_Tnp_Mut domain-containing protein3.24e-2540.59Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA
        M+KL I VFHSGQWD+   Y++YKT  VLVD + S F+ FV+LI  E+  +   S I+LS+LL  G   +Q V++I ++KDVTWFL+LVK Q T++ LVA
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA

Query:  HSIDTILDVSIGSSSS-----------LVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        H+I  + D+ +  SS            L  + +  +  +  D+ +++ ++     KEKD+F SKE+L K+
Subjt:  HSIDTILDVSIGSSSS-----------LVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

A0A5D3DWG1 Mutator-like transposase8.58e-2539.41Show/hide
Query:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA
        M+KL I VFHSGQWD+   Y++YKT  VLVD + S F+ FV+LI  E++ +   S I+LS+LL  G   +Q+V++I ++KDVTWFL+LVK   T++ LVA
Subjt:  MVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIE---SCIELSVLLPIG-NGVQHVLKIVKNKDVTWFLTLVKDQSTQYLLVA

Query:  HSI----------DTILDVSIGSSSSLV-ETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA
        H+I           +++D  + +  SL+  + +  +  +  D+ +++ ++     KEKD+F SKE+L K+
Subjt:  HSI----------DTILDVSIGSSSSLV-ETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCTTGTTGCAATTGTTAAAGGCGAGATCACTAGGTTGCTCCCTTTTAAAGAGTTCATTGTAGTTATGGTTAAGCTTGCAATCAATGTATTTCATAGTGGTCAATGGGA
TGAGCAGCAGTGCTACGTGGATTACAAAACAAATTGTGTTTTGGTTGATGGAGTGACATCATCATTTGATTTTTTTGTGAACTTGATACATACTGAAATTCAGATTGAGT
CATGTATTGAACTTTCAGTTTTGTTGCCTATAGGTAATGGTGTTCAACATGTTCTTAAGATTGTTAAAAACAAAGATGTGACTTGGTTTTTGACATTAGTTAAGGATCAA
TCTACCCAATATCTTTTAGTTGCTCATTCTATAGACACGATTTTGGATGTGTCAATTGGTTCTTCTTCTTCTCTAGTTGAGACTGATTTAGGATGTGAATTAGCACTTTT
TAGAGATGTTGATATTACTAATTATACTAACAATGAGGTGGCTTTTAAGGAGAAGGATTTGTTTTGTAGTAAAGAAATTTTGTTGAAGGCATCCGCTTTATAG
mRNA sequenceShow/hide mRNA sequence
GTTCTTGTTGCAATTGTTAAAGGCGAGATCACTAGGTTGCTCCCTTTTAAAGAGTTCATTGTAGTTATGGTTAAGCTTGCAATCAATGTATTTCATAGTGGTCAATGGGA
TGAGCAGCAGTGCTACGTGGATTACAAAACAAATTGTGTTTTGGTTGATGGAGTGACATCATCATTTGATTTTTTTGTGAACTTGATACATACTGAAATTCAGATTGAGT
CATGTATTGAACTTTCAGTTTTGTTGCCTATAGGTAATGGTGTTCAACATGTTCTTAAGATTGTTAAAAACAAAGATGTGACTTGGTTTTTGACATTAGTTAAGGATCAA
TCTACCCAATATCTTTTAGTTGCTCATTCTATAGACACGATTTTGGATGTGTCAATTGGTTCTTCTTCTTCTCTAGTTGAGACTGATTTAGGATGTGAATTAGCACTTTT
TAGAGATGTTGATATTACTAATTATACTAACAATGAGGTGGCTTTTAAGGAGAAGGATTTGTTTTGTAGTAAAGAAATTTTGTTGAAGGCATCCGCTTTATAG
Protein sequenceShow/hide protein sequence
VLVAIVKGEITRLLPFKEFIVVMVKLAINVFHSGQWDEQQCYVDYKTNCVLVDGVTSSFDFFVNLIHTEIQIESCIELSVLLPIGNGVQHVLKIVKNKDVTWFLTLVKDQ
STQYLLVAHSIDTILDVSIGSSSSLVETDLGCELALFRDVDITNYTNNEVAFKEKDLFCSKEILLKASAL