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Cucsat.G15429 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15429
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationctg2009:4668563..4681571
RNA-Seq ExpressionCucsat.G15429
SyntenyCucsat.G15429
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0000325 - plant-type vacuole (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031744753.1 uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]1.62e-2250.86Show/hide
Query:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------
        FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+DVRP HTKLDPK+LK IFL                      
Subjt:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------

Query:  --LVFFEHSSFYSTPS
          +VFFE + F S+PS
Subjt:  --LVFFEHSSFYSTPS

XP_031744754.1 uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]1.62e-2250.86Show/hide
Query:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------
        FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+DVRP HTKLDPK+LK IFL                      
Subjt:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------

Query:  --LVFFEHSSFYSTPS
          +VFFE + F S+PS
Subjt:  --LVFFEHSSFYSTPS

XP_031744755.1 uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]1.62e-2250.86Show/hide
Query:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------
        FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+DVRP HTKLDPK+LK IFL                      
Subjt:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------

Query:  --LVFFEHSSFYSTPS
          +VFFE + F S+PS
Subjt:  --LVFFEHSSFYSTPS

XP_031744756.1 uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus]1.60e-2250.86Show/hide
Query:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------
        FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+DVRP HTKLDPK+LK IFL                      
Subjt:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------

Query:  --LVFFEHSSFYSTPS
          +VFFE + F S+PS
Subjt:  --LVFFEHSSFYSTPS

XP_031744758.1 uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]1.57e-2250.86Show/hide
Query:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------
        FQM+    FW D VS ACFLIN MPSS+  GEIP+ +L P +HLF I PKI G  CFV+DVRP HTKLDPK+LK IFL                      
Subjt:  FQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVI--------------------

Query:  --LVFFEHSSFYSTPS
          +VFFE + F S+PS
Subjt:  --LVFFEHSSFYSTPS

TrEMBL top hitse value%identityAlignment
A0A0V0I0V2 Putative retrovirus-related Pol polyprotein from transposon TNT 1-94-like4.32e-2156.96Show/hide
Query:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL
        +FQM  P  FWAD VS ACFLIN MPS++  G++P+ ++ P + LF + PK+ G TC+V+DVRP  TKLDPK LK IFL
Subjt:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL

A0A0V0IC00 Putative ovule protein3.99e-2256.96Show/hide
Query:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL
        +FQM  P  FWAD VS ACFLIN MPS++  G++P+ ++ P + LF + PK+ G TC+V+DVRP  TKLDPK LK IFL
Subjt:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL

A0A438G5Y3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.42e-2058.23Show/hide
Query:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL
        +FQM  P  FWAD +S ACFLIN MPS++   +IP+ IL PK+ LF + P+I G TC+V+DVRP  TKLDPK LK +FL
Subjt:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL

A0A438HPS2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.50e-2043.59Show/hide
Query:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL---------------------
        MFQM  P  FW D VS ACFLINCMP+ + KG+IP+ ++ P++ LF + P+I G TC+V+D RP  TKLDPK L+ +FL                     
Subjt:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL---------------------

Query:  -VILVFFEHSSFYSTPS
           +VF E +SF+S+P+
Subjt:  -VILVFFEHSSFYSTPS

A5BSK6 Integrase catalytic domain-containing protein8.06e-2159.49Show/hide
Query:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL
        +FQM  P  FWAD +SIACFLIN MPS++    IP+ IL PK+ LF + P+I G TC+V+DVRP  TKLDPK LK +FL
Subjt:  MFQMNFPISFWAD-VSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAAATGAATTTTCCAATTTCTTTTTGGGCTGATGTTTCCATAGCCTGTTTCTTAATAAATTGCATGCCCTCTTCCATTTTTAAGGGTGAGATACCTTTT
TGTATCTTATGCCCCAAACAACATTTGTTTCTCATTCCACCCAAAATAATTGGTTATACTTGCTTTGTCCAAGATGTTCGGCCTCAACATACAAAGTTGGATCCA
AAGACCTTAAAATATATCTTTTTGGTTATTCTCGTGTTCTTTGAACATTCCTCCTTTTATTCCACACCTTCTTTCTTTTCGAATATGAGTCGAGGGAGTATCAAG
AGTCAAAGGATGATTTCTTTGTCTACAATGTTATCTCTCCTTCTAATCCTCTTTGTGGTTCATCTTCACGTGTGTTTACTTCTATTTGTCAACCCATCACTGAAG
TCTATGATCGACGACAACCTTCTTCAATTCCATGCCCTACCCCAAGGCTTCTTCGTCATTGGATCCAGAAATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCAAATGAATTTTCCAATTTCTTTTTGGGCTGATGTTTCCATAGCCTGTTTCTTAATAAATTGCATGCCCTCTTCCATTTTTAAGGGTGAGATACCTTTT
TGTATCTTATGCCCCAAACAACATTTGTTTCTCATTCCACCCAAAATAATTGGTTATACTTGCTTTGTCCAAGATGTTCGGCCTCAACATACAAAGTTGGATCCA
AAGACCTTAAAATATATCTTTTTGGTTATTCTCGTGTTCTTTGAACATTCCTCCTTTTATTCCACACCTTCTTTCTTTTCGAATATGAGTCGAGGGAGTATCAAG
AGTCAAAGGATGATTTCTTTGTCTACAATGTTATCTCTCCTTCTAATCCTCTTTGTGGTTCATCTTCACGTGTGTTTACTTCTATTTGTCAACCCATCACTGAAG
TCTATGATCGACGACAACCTTCTTCAATTCCATGCCCTACCCCAAGGCTTCTTCGTCATTGGATCCAGAAATGAGTGA
Protein sequenceShow/hide protein sequence
MFQMNFPISFWADVSIACFLINCMPSSIFKGEIPFCILCPKQHLFLIPPKIIGYTCFVQDVRPQHTKLDPKTLKYIFLVILVFFEHSSFYSTPSFFSNMSRGSIK
SQRMISLSTMLSLLLILFVVHLHVCLLLFVNPSLKSMIDDNLLQFHALPQGFFVIGSRNE