CuGenDBv2

Gene ID	Cucsat.G15514
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	DNA-directed RNA polymerase III subunit RPC3
Genome location	ctg2009:80503..87621
RNA-Seq Expression	Cucsat.G15514
Synteny	Cucsat.G15514
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0005666 - RNA polymerase III complex (cellular component) GO:0003697 - single-stranded DNA binding (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR008806 - RNA polymerase III Rpc82, C -terminal IPR013197 - RNA polymerase III subunit RPC82-related, helix-turn-helix IPR036388 - Winged helix-like DNA-binding domain superfamily IPR039748 - DNA-directed RNA polymerase III subunit RPC3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033658.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuwa]

0.0

95.9

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP
        KF+AIASQKLGQDKNCQELLEGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE PPPRKRGAKAAKI EVP
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKINLRRI+EQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVNV-KIYLFR
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVN+ KI+LFR
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVNV-KIYLFR

TYK22958.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuwa]

0.0

95.9

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP
        KF+AIASQKLGQDKNCQELLEGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE PPPRKRGAKAAKI EVP
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKINLRRI+EQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVNV-KIYLFR
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVN+ KI+LFR
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVNV-KIYLFR

XP_008439232.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo]

0.0

96.24

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP
        KF+AIASQKLGQDKNCQELLEGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE PPPRKRGAKAAKI EVP
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKINLRRI+EQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

XP_011651154.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis sativus]

0.0

99.37

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDA KDDTLYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPE
        KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPE
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPE

Query:  TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT
        TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT
Subjt:  TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT

Query:  RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKI
        RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKI
Subjt:  RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKI

Query:  SDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
        SDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  SDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

XP_038878061.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida]

9.87e-313

90.61

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        MVMTQYGIKYAVHI+TAHFGNLVAKVCETLLR+GPLTLRLLIRFTELT SQVNNSLLILIQHNCVQAFT VTEGEFGDA K DT YLALFSN+LHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP
        KF+AIAS+KL +DK+C+ELLEGLLQNGRLSMEQ+VERA+SS  AGN PI D+VHDSLFKLLNAHFVERCPAPEP+LSPKVEE PPP+KRGAKAAKISEVP
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQR++E+ARP+EVLRFSMGDTN EAEKSEH+SQISGQKRKHDDLE+ QDSGDAD  ILWRAN+DEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL++LGCPG+DDY+INLR+IIEQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+EENKE+
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBF3 DNA-directed RNA polymerase III subunit RPC3

0.0

99.37

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDA KDDTLYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPE
        KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPE
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPE

Query:  TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT
        TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT
Subjt:  TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT

Query:  RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKI
        RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKI
Subjt:  RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKI

Query:  SDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
        SDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  SDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

A0A1S3AYY3 DNA-directed RNA polymerase III subunit RPC3

0.0

96.24

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP
        KF+AIASQKLGQDKNCQELLEGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE PPPRKRGAKAAKI EVP
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKINLRRI+EQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

A0A5A7SSU3 DNA-directed RNA polymerase III subunit RPC3

0.0

95.9

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP
        KF+AIASQKLGQDKNCQELLEGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE PPPRKRGAKAAKI EVP
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKINLRRI+EQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVNV-KIYLFR
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVN+ KI+LFR
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVNV-KIYLFR

A0A5D3DHJ0 DNA-directed RNA polymerase III subunit RPC3

0.0

95.9

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP
        KF+AIASQKLGQDKNCQELLEGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE PPPRKRGAKAAKI EVP
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKINLRRI+EQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVNV-KIYLFR
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVN+ KI+LFR
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVNV-KIYLFR

A0A6J1G256 DNA-directed RNA polymerase III subunit RPC3

3.97e-298

86.01

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Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS
        M  TQYGIKYAVHI+TAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+ SQ+NNSLLILIQHNCVQAFT VTEGEFGDA K DT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFS

Query:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP
        KF+AIAS+KL +DK+C+ELLEGLLQNGRLSMEQ++ERA+SS  AGN PI DVV++SL KLLNAHFVERCPAPEPTLSP+VEE PPPRKRGAKAAK+SEVP
Subjt:  KFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
         TLEQRL+E+ARP+EV+RFS+G+TN EAE+SEH+S ISGQKRK  DL++ Q+SGDADG ILWRAN+DEF+RCLRHKACIEHVRSQFDDG VNVLSAILEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL+ALGC G++DYKINL++IIEQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
        ISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+E++KE+
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

SwissProt top hits

e value

%identity

Alignment

Q2TBL4 DNA-directed RNA polymerase III subunit RPC3

3.0e-24

25.35

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Query:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +LIQHN V          +    +    Y A  + +L  +R+ ++
Subjt:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKF

Query:  VAIASQKLGQDKNCQELLEGLLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV
        +  A  K       + ++E LL NG+++M  +V    +R   +   G       V ++  +L++ HFV+RCP    T +     PPP    A    +SE 
Subjt:  VAIASQKLGQDKNCQELLEGLLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV

Query:  PETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE
           L  +L    +  +  R S  D   E +           K+  D+ E   D G     I W+AN D F +  R +A +  V ++ D     ++  +L 
Subjt:  PETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFL
          R SE    +    T PLS + I+        + K  + + +TL  D     +   G  G   Y INL + +    T  +ES+V +R+G    R+FR +
Subjt:  ATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
         +   L E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK +
Subjt:  SKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

Q55FJ5 DNA-directed RNA polymerase III subunit rpc3

1.2e-15

20.03

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Query:  YGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LTPSQVNNSLLILIQHNCV---QAFTDVTEGEF-----GDASKDDTLYLALFSNI
        Y  K A+ I+   FG+ V KV E L+++G  + +++ +       LT  ++   LL+LIQHN V   +    +T+ E      G+    D++Y A+  N 
Subjt:  YGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LTPSQVNNSLLILIQHNCV---QAFTDVTEGEF-----GDASKDDTLYLALFSNI

Query:  LHRMRFSKFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVV----HDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKR-
        +HR+RF KF+       G +     +LE L+ +GRL M+ L+++A    R       D +     D+  KL+   F+ R P P P    +      ++  
Subjt:  LHRMRFSKFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVV----HDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKR-

Query:  ------------GAKAAKISEV------------PETLEQRLIEAARPVEVLRFSMGDTN-PEAEKSEHHSQIS----------------GQKRKHDDLE
                    GA   K S+             P +        A  +E+L      T  P   K     + S                G+KRK  D+ 
Subjt:  ------------GAKAAKISEV------------PETLEQRLIEAARPVEVLRFSMGDTN-PEAEKSEHHSQIS----------------GQKRKHDDLE

Query:  IAQDSGDAD---------------------------------------------------------------------GPILWRANYDEFIRCLRHKACI
           D  + D                                                                       +LW  NY++FI   + KAC 
Subjt:  IAQDSGDAD---------------------------------------------------------------------GPILWRANYDEFIRCLRHKACI

Query:  EHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKN-EVGRSMTLDRVEASLAAL------------------GCPGIDDYKINLRR
        + V  + +     + +A+++  + S +  +  +T  +  +NI EE  ++ +  + M   ++E  L+ +                      +  Y++N+  
Subjt:  EHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKN-EVGRSMTLDRVEASLAAL------------------GCPGIDDYKINLRR

Query:  IIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS------LCLLWRVDRYNLWEHV
        II   +   VESI+ +++G +  R+F+ L     L+E ++I++ + +  NE   +L+ + +   + +++    +PR S         L+ VD   +    
Subjt:  IIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS------LCLLWRVDRYNLWEHV

Query:  LDEMYHASLNLQLRLAHEIEENKEVNVKI
         ++++ A  N + RL  E+E +K+   K+
Subjt:  LDEMYHASLNLQLRLAHEIEENKEVNVKI

Q5XIL3 DNA-directed RNA polymerase III subunit RPC3

5.7e-23

24.34

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Query:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN V          +    +    Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKF

Query:  VAIASQKLGQDKNCQELLEGLLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV
        +       G     + ++E LL NG+++M  +V    +R   +   G       V ++  +L + HFV+RCP    T S     PPP    A    I+E 
Subjt:  VAIASQKLGQDKNCQELLEGLLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV

Query:  PETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE
           L  +L    +         G     +++       + + R  D+ E   D G     I W+ N D F +  R +A +  V ++ D     ++  +L 
Subjt:  PETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFL
          R SE    +    T PLS + I+        + K  + + +TL  D     +   G  G   Y INL + +    T  +ES++ +R+G    R+FR +
Subjt:  ATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
         +   L E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK +
Subjt:  SKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

Q9BUI4 DNA-directed RNA polymerase III subunit RPC3

1.4e-24

25.4

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Query:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +L+QHN V          +    +    Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKF

Query:  VAIASQKLGQDKNCQELLEGLLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV
        +   ++ L  D   + ++E LL NG+L+M  +V    +R   +   G       V ++  +L + HFV+RCP+   T +     PPP    A    I+E 
Subjt:  VAIASQKLGQDKNCQELLEGLLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV

Query:  PETLEQRLIEAARPVEVLRFSMGDT--NPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFD---DGVVNVL
           L  +L    +  +  R S  D    P+A++ ++ +         D+ E   D G     I W+AN D F +  R +A +  V ++ D     +V  +
Subjt:  PETLEQRLIEAARPVEVLRFSMGDT--NPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFD---DGVVNVL

Query:  SAILEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMF
          + E T SS        T PLS + I+        + K  + + +TL  D     +   G  G   Y INL + +    T  +ES+V +R+G    R+F
Subjt:  SAILEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMF

Query:  RFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
        R + +    +E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK +
Subjt:  RFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

Q9D483 DNA-directed RNA polymerase III subunit RPC3

7.5e-23

23.63

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Query:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN V          +    +    Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKF

Query:  VAIASQKLGQDKNCQELLEGLLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV
        +       G     + ++E LL NG+++M  +V    +R   +   G       V ++  +L + HFV+RCP    T S     PPP    A    I+E 
Subjt:  VAIASQKLGQDKNCQELLEGLLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV

Query:  PETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE
           L  +L    +         G     +++       + + R  D+ E + D G     I W+ N D F +  R +A +  V ++ D     ++  +L 
Subjt:  PETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE

Query:  ATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSK
         +  +        T PLS + I+        + K  + + +TL  D     +   G  G   + INL + +    T  +ES++ +R+G    R+FR + +
Subjt:  ATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSK

Query:  TGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
           L E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK +
Subjt:  TGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

Arabidopsis top hits

e value

%identity

Alignment

AT3G49000.1 RNA polymerase III subunit RPC82 family protein

3.5e-116

46.34

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMR
        M M+++GI YA+HI+T  FG++V+KVCE LLRKGPL+ R + R  E  +  ++V + L +LIQHNCVQAF+   E   G  SK    Y+ LF+NILHR+R
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMR

Query:  FSKFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV
        ++KF  I +++L  D  C  +L+GLL NGRL++ Q +ER   S   GN   S+ + DSL KL+ A FVER P+PEP L  K E+ P ++RGAKAAKI + 
Subjt:  FSKFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEV

Query:  PETLEQRLIEAARPVEVLRFSM-GDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAIL
        PETLE++++EAA PV+ +RF +  + +  +  ++ +S I+  KRK  D+    D+ D+   ++WR N++EFI  LRHKAC+E V+ + D+G   VL A+L
Subjt:  PETLEQRLIEAARPVEVLRFSM-GDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAIL

Query:  EATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGI----------DDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRF
        E  RS EK VKT+ + P+S+ +IYEEV+K E GR+M  +RVEA L  L               D Y ++ + II  AQ DE+E++V++RYG++A+RMFR+
Subjt:  EATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGI----------DDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV
        LS+ G  VET+KI+D++  +K + P+ L ++WKD YL+M+K+A+T P  ++  LLW+V++  +   +LDEMYHASLNL LRLAHE+E  KE+
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGATGACTCAGTATGGCATCAAATATGCCGTCCACATTATGACTGCACACTTCGGAAATCTCGTCGCTAAAGTGTGTGAAACCCTGCTTCGAAAGGGACCTCTGAC
GCTGAGACTTCTTATACGATTCACAGAACTTACCCCATCACAGGTCAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGATGTGACAGAAG
GTGAGTTTGGAGATGCATCCAAGGATGATACACTATACTTGGCATTGTTTAGTAATATACTTCATCGTATGAGGTTTTCCAAATTTGTGGCAATTGCTTCCCAGAAGCTT
GGGCAAGATAAAAATTGTCAAGAACTTCTCGAGGGTCTGCTACAGAATGGTAGGCTTTCAATGGAACAACTGGTTGAAAGAGCAGAGTCGAGTGGACGTGCAGGAAACCA
TCCAATTTCAGATGTTGTACACGACAGTCTATTTAAACTTTTGAATGCCCATTTTGTTGAACGCTGTCCAGCCCCAGAACCAACTCTTTCGCCCAAAGTTGAAGAACCTC
CTCCTAGAAAAAGAGGTGCTAAGGCTGCCAAGATATCTGAGGTGCCAGAGACCTTAGAACAACGTCTTATAGAAGCAGCACGTCCAGTGGAAGTTCTAAGATTTTCAATG
GGTGATACCAACCCAGAAGCTGAAAAGAGTGAACATCACTCACAAATTTCTGGACAGAAGCGCAAACACGACGATCTAGAGATTGCACAAGATTCTGGAGATGCAGATGG
TCCTATTCTTTGGCGTGCCAACTACGACGAGTTTATAAGATGTCTTAGACATAAGGCTTGCATTGAACATGTTAGATCACAGTTCGATGATGGAGTGGTAAATGTCTTGA
GTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAATCGTGAAAACAGAGATAACAGTTCCTTTATCATTAGATAACATATATGAGGAGGTAATGAAGAATGAAGTAGGA
CGGAGTATGACCTTAGATCGGGTTGAAGCTTCCCTTGCTGCATTGGGTTGTCCGGGGATAGATGATTATAAAATCAATTTACGGAGGATAATCGAACAAGCTCAAACTGA
TGAGGTTGAATCAATTGTTTTGAAAAGATATGGAAGGGATGCTTACAGAATGTTCAGATTTCTGTCGAAAACTGGTGGCTTGGTTGAGACAGAAAAGATTTCCGATAGTT
CGTTTGTTGATAAGAATGAGGCACCTAAAATTTTATATAGGTTGTGGAAGGACGAGTACCTATACATGGAGAAAGTAGCTCTAACAGTACCTAGACATTCACTATGCTTG
TTGTGGAGAGTAGACAGATATAACTTATGGGAACATGTTCTGGATGAGATGTATCATGCTTCATTGAACTTGCAGCTACGACTGGCTCATGAGATCGAAGAAAACAAAGA
GGTTAATGTGAAAATTTACTTATTTCGTATGTGCAATTGGTGGTATTTGTTTCCAGGGTTGGGATTAGATGGGTTAGACATCCTAAGTCCAATCCCTTGTCTGGGACAAG
CGTATAGGAGTCCAGCTTCCTACCCTCTTTCGAATGAGTTTGAATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKL
GQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSM
GDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVG
RSMTLDRVEASLAALGCPGIDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCL
LWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEVNVKIYLFRMCNWWYLFPGLGLDGLDILSPIPCLGQAYRSPASYPLSNEFE

Cucsat.G15514 (gene) of Cucumber (B10) v3 genome