; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G15531 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15531
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat-containing protein
Genome locationctg2009:386410..388824
RNA-Seq ExpressionCucsat.G15531
SyntenyCucsat.G15531
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033710.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]5.36e-22394.26Show/hide
Query:  MTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDE

Query:  DMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
        ++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  DMSEDPDEILEDEHMWSKSNFEHDFMGLGQL

TYK23004.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.66e-22394.26Show/hide
Query:  MTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDE

Query:  DMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
        ++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  DMSEDPDEILEDEHMWSKSNFEHDFMGLGQL

XP_004140747.2 pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus]8.40e-240100Show/hide
Query:  MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED

Query:  SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL

XP_008439301.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Cucumis melo]4.38e-22694.08Show/hide
Query:  MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        M IIFTSMTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED

Query:  SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDE++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL

XP_016899030.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Cucumis melo]1.23e-21394.6Show/hide
Query:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
        +RMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
Subjt:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL

Query:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVT
        ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMHDKLFEVFADMEELGVQPNMAIVT
Subjt:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVT

Query:  KVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDPDEILEDEHMW
        KVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSEDSSLEDDE++ +DPDEILEDEHMW
Subjt:  KVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDPDEILEDEHMW

Query:  SKSNFEHDFMGLGQL
        SKSNFEHDFMGLGQL
Subjt:  SKSNFEHDFMGLGQL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q9 Uncharacterized protein4.07e-240100Show/hide
Query:  MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED

Query:  SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL

A0A1S3AY30 pentatricopeptide repeat-containing protein At4g21190 isoform X22.12e-22694.08Show/hide
Query:  MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        M IIFTSMTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED

Query:  SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDE++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL

A0A1S4DTK8 pentatricopeptide repeat-containing protein At4g21190 isoform X15.94e-21494.6Show/hide
Query:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
        +RMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
Subjt:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL

Query:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVT
        ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMHDKLFEVFADMEELGVQPNMAIVT
Subjt:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVT

Query:  KVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDPDEILEDEHMW
        KVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSEDSSLEDDE++ +DPDEILEDEHMW
Subjt:  KVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDPDEILEDEHMW

Query:  SKSNFEHDFMGLGQL
        SKSNFEHDFMGLGQL
Subjt:  SKSNFEHDFMGLGQL

A0A5A7SS06 Pentatricopeptide repeat-containing protein2.59e-22394.26Show/hide
Query:  MTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDE

Query:  DMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
        ++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  DMSEDPDEILEDEHMWSKSNFEHDFMGLGQL

A0A5D3DHA7 Pentatricopeptide repeat-containing protein1.29e-22394.26Show/hide
Query:  MTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDE

Query:  DMSEDPDEILEDEHMWSKSNFEHDFMGLGQL
        ++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  DMSEDPDEILEDEHMWSKSNFEHDFMGLGQL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.2e-4547.06Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY
        AE LWN +   H  SIPR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  K ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY

Query:  LSEN
         SE+
Subjt:  LSEN

Q8LG95 Pentatricopeptide repeat-containing protein At4g211904.8e-10065.87Show/hide
Query:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L Y+ P   + ++   +  F+  P++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY + MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIV

Query:  TKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDPDE
        + VG VF +L M DKY+KLMKKYPPP+WE+RYIKG+RVK++AK L+E      GLS       S  + ID  EI SE+   ED ED+SE+ ++
Subjt:  TKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDPDE

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein8.3e-4747.06Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY
        AE LWN +   H  SIPR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  K ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY

Query:  LSEN
         SE+
Subjt:  LSEN

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein8.3e-4747.06Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY
        AE LWN +   H  SIPR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  K ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY

Query:  LSEN
         SE+
Subjt:  LSEN

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein8.3e-4747.06Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY
        AE LWN +   H  SIPR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  K ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY

Query:  LSEN
         SE+
Subjt:  LSEN

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein8.3e-4747.06Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY
        AE LWN +   H  SIPR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  K ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKY

Query:  LSEN
         SE+
Subjt:  LSEN

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein3.4e-10165.87Show/hide
Query:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L Y+ P   + ++   +  F+  P++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY + MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIV

Query:  TKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDPDE
        + VG VF +L M DKY+KLMKKYPPP+WE+RYIKG+RVK++AK L+E      GLS       S  + ID  EI SE+   ED ED+SE+ ++
Subjt:  TKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDPDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATCATTTTCACTTCGATGACACACTCTCTAGCCCAAGCAACGCTCTCGTCCTTCTTGGCTTCCTACCGGATGCTTACTTTAGTTTACACTTTTCCAGTCACGTC
CAAAAGGATAGAATCTGTAAATTTTTCCTGGTGTCCAAGCAGCTCGGTTGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCAAAAAGAGGA
TCGGGACTATATCCAAGGCAGCAAAACTTGTTGATTGTGTAAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTAGAG
TTTCCTCTTATTACAGTTAAGAAAGCCCTGAAGACCTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGCTAAGTAAAGGCCAGGGAAGAAC
AATGGGAAGCTATTTTACACTATTAAACGCATTAGCTGAAGATGGAAGACTTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCTCAGCATCTGGAGAGCATTCCTC
GCATATTCTTTCATAAAATGATATCCCTCTACTACGATCAGGCAATGCATGACAAGTTGTTTGAGGTATTTGCTGATATGGAGGAACTTGGAGTTCAGCCAAATATGGCA
ATTGTCACTAAGGTTGGAAACGTTTTCCAAGAGTTGGGTATGCTCGATAAATACAAAAAACTGATGAAGAAATATCCCCCACCGAAATGGGAATATCGTTACATCAAAGG
AAAACGCGTCAAAATACGAGCTAAGTATCTGTCTGAAAATGGTAATTCAAACAATGGTTTAAGTGAGCATGCCAAAATGGAGCATAGTTCAACAAATTCAATAGATGAAG
CTGAAATAACTTCCGAAGATTCCAGTCTCGAAGATGATGAGGATATGAGCGAAGATCCAGATGAAATTCTGGAAGATGAACATATGTGGAGCAAATCCAATTTTGAGCAT
GATTTCATGGGGCTTGGGCAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATCATTTTCACTTCGATGACACACTCTCTAGCCCAAGCAACGCTCTCGTCCTTCTTGGCTTCCTACCGGATGCTTACTTTAGTTTACACTTTTCCAGTCACGTC
CAAAAGGATAGAATCTGTAAATTTTTCCTGGTGTCCAAGCAGCTCGGTTGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCAAAAAGAGGA
TCGGGACTATATCCAAGGCAGCAAAACTTGTTGATTGTGTAAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTAGAG
TTTCCTCTTATTACAGTTAAGAAAGCCCTGAAGACCTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGCTAAGTAAAGGCCAGGGAAGAAC
AATGGGAAGCTATTTTACACTATTAAACGCATTAGCTGAAGATGGAAGACTTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCTCAGCATCTGGAGAGCATTCCTC
GCATATTCTTTCATAAAATGATATCCCTCTACTACGATCAGGCAATGCATGACAAGTTGTTTGAGGTATTTGCTGATATGGAGGAACTTGGAGTTCAGCCAAATATGGCA
ATTGTCACTAAGGTTGGAAACGTTTTCCAAGAGTTGGGTATGCTCGATAAATACAAAAAACTGATGAAGAAATATCCCCCACCGAAATGGGAATATCGTTACATCAAAGG
AAAACGCGTCAAAATACGAGCTAAGTATCTGTCTGAAAATGGTAATTCAAACAATGGTTTAAGTGAGCATGCCAAAATGGAGCATAGTTCAACAAATTCAATAGATGAAG
CTGAAATAACTTCCGAAGATTCCAGTCTCGAAGATGATGAGGATATGAGCGAAGATCCAGATGAAATTCTGGAAGATGAACATATGTGGAGCAAATCCAATTTTGAGCAT
GATTTCATGGGGCTTGGGCAATTGTAA
Protein sequenceShow/hide protein sequence
MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELE
FPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMA
IVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDPDEILEDEHMWSKSNFEH
DFMGLGQL