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Cucsat.G15638 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15638
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrotrans_gag domain-containing protein
Genome locationctg2009:4147771..4154106
RNA-Seq ExpressionCucsat.G15638
SyntenyCucsat.G15638
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025482.1 uncharacterized protein E6C27_scaffold417G00860 [Cucumis melo var. makuwa]2.38e-3966.98Show/hide
Query:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL
        A +NL M+A+ANQAP GGAISVS++KI EPKP  GARDAK LEN+IFD++QYFKATNT TEE KV LAT       K+    RYVD QEGRCTI TWD+L
Subjt:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL

Query:  KKELCL
        K+EL L
Subjt:  KKELCL

KAA0048768.1 uncharacterized protein E6C27_scaffold43G00760 [Cucumis melo var. makuwa]1.81e-3969.39Show/hide
Query:  MRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSLKKEL
        MRA+ NQAPTGGAISVSK+KI EPKPF GARD K LENFIFD+EQYFKATNT TEE KV L T       K+    RY+D QEG+CTI+ WD+LKKEL
Subjt:  MRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSLKKEL

KAA0060138.1 uncharacterized protein E6C27_scaffold39G00590 [Cucumis melo var. makuwa]8.37e-4067.92Show/hide
Query:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL
        A +NL MRA+ANQAP GGAISVS++KI EPKPF G RD K LEN+IFD+EQYFKATNT TEE KV LA        K+    RY+D QEGRCTI+TWD+L
Subjt:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL

Query:  KKELCL
        KKELCL
Subjt:  KKELCL

KAA0067252.1 uncharacterized protein E6C27_scaffold418G00690 [Cucumis melo var. makuwa]3.82e-3969.23Show/hide
Query:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL
        A +NL MRA+ANQAP GGAISVS++KISEPKPF  ARDAK LEN+IFD+EQYFKATNT TEE KV LAT       K+    RYVD QEGRCT++TWD+L
Subjt:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL

Query:  KKEL
        K+EL
Subjt:  KKEL

TYK28468.1 uncharacterized protein E5676_scaffold629G001010 [Cucumis melo var. makuwa]3.04e-4069.81Show/hide
Query:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL
        A +NL+MRA+ANQAPTGGAISVS++KI EPKPF  ARDAK LEN+IFD+EQYFKATNT TEE KV LAT       K+    RYVD QEGRCTI TWD+L
Subjt:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL

Query:  KKELCL
        K+EL L
Subjt:  KKELCL

TrEMBL top hitse value%identityAlignment
A0A5A7U0N1 Uncharacterized protein8.76e-4069.39Show/hide
Query:  MRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSLKKEL
        MRA+ NQAPTGGAISVSK+KI EPKPF GARD K LENFIFD+EQYFKATNT TEE KV L T       K+    RY+D QEG+CTI+ WD+LKKEL
Subjt:  MRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSLKKEL

A0A5A7UY20 Retrotrans_gag domain-containing protein4.05e-4067.92Show/hide
Query:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL
        A +NL MRA+ANQAP GGAISVS++KI EPKPF G RD K LEN+IFD+EQYFKATNT TEE KV LA        K+    RY+D QEGRCTI+TWD+L
Subjt:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL

Query:  KKELCL
        KKELCL
Subjt:  KKELCL

A0A5A7VFV0 Retrotrans_gag domain-containing protein1.85e-3969.23Show/hide
Query:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL
        A +NL MRA+ANQAP GGAISVS++KISEPKPF  ARDAK LEN+IFD+EQYFKATNT TEE KV LAT       K+    RYVD QEGRCT++TWD+L
Subjt:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL

Query:  KKEL
        K+EL
Subjt:  KKEL

A0A5D3BKV0 Retrotrans_gag domain-containing protein1.15e-3966.98Show/hide
Query:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL
        A +NL M+A+ANQAP GGAISVS++KI EPKP  GARDAK LEN+IFD++QYFKATNT TEE KV LAT       K+    RYVD QEGRCTI TWD+L
Subjt:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL

Query:  KKELCL
        K+EL L
Subjt:  KKELCL

A0A5D3DYE5 Retrotrans_gag domain-containing protein1.47e-4069.81Show/hide
Query:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL
        A +NL+MRA+ANQAPTGGAISVS++KI EPKPF  ARDAK LEN+IFD+EQYFKATNT TEE KV LAT       K+    RYVD QEGRCTI TWD+L
Subjt:  AEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSL

Query:  KKELCL
        K+EL L
Subjt:  KKELCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGAAGCCGACTAAATTAGCAGAGGTGAACCTTATAATGCGAGCTATAGCAAATCAAGCTCCGACTGGAGGAGCAATTTCAGTTAGCAAGATAAAAATCTCTGA
ACCCAAGCCCTTCTATGGGGCGAGAGATGCAAAGACACTAGAAAATTTTATCTTTGATATCGAACAATACTTTAAGGCCACAAACACCAATACAGAAGAAGTCAAAGTGA
TATTGGCAACCCATGCATCTGTCGGAAGATGCAAAGTTATGGTGGAGGTTCGATATGTTGATTTTCAGGAAGGACGTTGCACGATAAATACCTGGGACAGTTTGAAGAAG
GAACTTTGTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGAAGCCGACTAAATTAGCAGAGGTGAACCTTATAATGCGAGCTATAGCAAATCAAGCTCCGACTGGAGGAGCAATTTCAGTTAGCAAGATAAAAATCTCTGA
ACCCAAGCCCTTCTATGGGGCGAGAGATGCAAAGACACTAGAAAATTTTATCTTTGATATCGAACAATACTTTAAGGCCACAAACACCAATACAGAAGAAGTCAAAGTGA
TATTGGCAACCCATGCATCTGTCGGAAGATGCAAAGTTATGGTGGAGGTTCGATATGTTGATTTTCAGGAAGGACGTTGCACGATAAATACCTGGGACAGTTTGAAGAAG
GAACTTTGTTTGTAG
Protein sequenceShow/hide protein sequence
MKQKPTKLAEVNLIMRAIANQAPTGGAISVSKIKISEPKPFYGARDAKTLENFIFDIEQYFKATNTNTEEVKVILATHASVGRCKVMVEVRYVDFQEGRCTINTWDSLKK
ELCL