; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G15689 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15689
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description30S ribosomal protein S21, chloroplastic-like
Genome locationctg2009:5898591..5900896
RNA-Seq ExpressionCucsat.G15689
SyntenyCucsat.G15689
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21
IPR038380 - Ribosomal protein S21 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAL35983.1 ribosome-like protein, partial [Cucumis sativus]1.23e-120100Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS

KAA0042889.1 hypothetical protein E6C27_scaffold44G004060 [Cucumis melo var. makuwa]5.95e-11596.15Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQP IASSPSP NHAA QFQTLKSRDGSVAL PQQGPNHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE+EDIP
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP

XP_004145671.1 30S ribosomal protein S21, chloroplastic [Cucumis sativus]9.58e-121100Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS

XP_008450090.2 PREDICTED: uncharacterized protein LOC103491780, partial [Cucumis melo]2.62e-11395.6Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQP IASSPSP NHAA QFQTLKSRDGSVAL PQQGPNHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE+ DIP
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP

XP_038900112.1 30S ribosomal protein S21, chloroplastic [Benincasa hispida]1.96e-10992.39Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAP--QFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNE
        MASLSSFFSFLLPSKPPPPKPHQP I SSPSP+NHAA   Q QTLKS+DGSV+L PQQGPNHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAP--QFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNE

Query:  PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP
        PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE+E+IP
Subjt:  PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP

TrEMBL top hitse value%identityAlignment
A0A0A0LDL7 Uncharacterized protein4.64e-121100Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS

A0A1S3BNG4 uncharacterized protein LOC1034917801.27e-11395.6Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQP IASSPSP NHAA QFQTLKSRDGSVAL PQQGPNHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE+ DIP
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP

A0A5D3C287 Uncharacterized protein2.88e-11596.15Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQP IASSPSP NHAA QFQTLKSRDGSVAL PQQGPNHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE+EDIP
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIP

A0A6J1J5C2 30S ribosomal protein S21, chloroplastic-like8.11e-10189.27Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
        MASLSSFFSFLLPSKPPPPKP QP IAS PSP+N AA QFQTLKSRDGSVAL+PQQ P HSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE
        ERLLNRFRREVMRAGVIQECKRR+FFEN  D++KRK+REAAKRNRRRRPQ RFTPQ+KQDVPATKQEADDDNWDLPE
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE

Q8VWX5 Ribosome-like protein (Fragment)5.93e-121100Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS

SwissProt top hitse value%identityAlignment
A1WW12 30S ribosomal protein S217.8e-0446.43Show/hide
Query:  VVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR
        V V +NEP E  L RF+R   +AGV+ E +RR ++E    VRKRK   A KR+ +R
Subjt:  VVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR

B8GPU0 30S ribosomal protein S214.6e-0446.43Show/hide
Query:  VVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR
        V V +NEP E  L RF+R   +AGV+ E +RR F+E   ++RKRK   A KR  +R
Subjt:  VVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR

P48949 30S ribosomal protein S212.1e-0448.28Show/hide
Query:  QVVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRR
        QVVV  NEP E  L RF+R+V +AG+  + K+ +FFE  Q+  KRK  EA +R +R R
Subjt:  QVVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRR

P82024 30S ribosomal protein S21, chloroplastic1.0e-3551.91Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPN----HSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDD
        MAS SS  +FL P  P           S P  SN   P   +L S+  S++++ ++  N      E    +L +V+CPSLA++NT++FRSAYNVQV+VDD
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPN----HSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDD

Query:  NEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRR--PQARFTPQNKQDVPATKQEADDDNWDLPE
        NE EERLLNRFRREVMRAGVIQECKRRR+FEN Q+ +KRK REAAKRN RRR  P     P  ++     K+E D DNWD+PE
Subjt:  NEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRR--PQARFTPQNKQDVPATKQEADDDNWDLPE

Arabidopsis top hitse value%identityAlignment
AT3G27160.1 Ribosomal protein S21 family protein2.0e-3952.43Show/hide
Query:  SLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEER
        SL+SF SF+ P K    KP  P   + PSP+       Q  ++     ++  ++  + +  LS+ELASVICPSLAY+NT+FF S YNVQV V+DNE EER
Subjt:  SLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEER

Query:  LLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPAT----KQEADDDNWDLPEDEDIPS
        L+NRFRREVMR GVIQECKRRR+FEN QD +KR+TR+AAKRN++RRPQARFT + +++  A     K++ ++DNW++P   D+PS
Subjt:  LLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPAT----KQEADDDNWDLPEDEDIPS

AT5G63300.1 Ribosomal protein S21 family protein1.6e-2039.68Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSA-YNVQVVVDDNEP
        + SLS   S LL SKPP P   +P       PS+ +A   Q L      +         H + ++     V  PSLA AN +FF+S+ YNV+VV  D E 
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSA-YNVQVVVDDNEP

Query:  EERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDV-----PATKQEADDDNWDL-PEDEDIP
        EE+L+N F+R   RAGV+QE +RRRFFE++ + + RKT+EAAK+ R+RRP  +  P +  ++      A++++  DD+W+L PED +IP
Subjt:  EERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDV-----PATKQEADDDNWDL-PEDEDIP

AT5G63300.2 Ribosomal protein S21 family protein3.1e-1641.89Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSA-YNVQVVVDDNEP
        + SLS   S LL SKPP P   +P       PS+ +A   Q L      +         H + ++     V  PSLA AN +FF+S+ YNV+VV  D E 
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSA-YNVQVVVDDNEP

Query:  EERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR
        EE+L+N F+R   RAGV+QE +RRRFFE++ + + RKT+EAAK+ R+R
Subjt:  EERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCTCTCCAGCTTCTTCTCCTTCCTCTTACCCTCTAAACCACCGCCCCCCAAGCCCCACCAGCCCTTCATTGCCTCCTCTCCTTCTCCGTCCAATCACGCCGC
CCCTCAGTTTCAAACACTGAAATCCAGGGATGGATCGGTTGCCCTAAACCCTCAACAGGGTCCCAACCATTCGGAGCCCTTATCCGCGGAATTGGCCTCCGTTATTTGTC
CCTCCCTAGCCTACGCCAACACAATGTTCTTCAGATCCGCATATAATGTTCAGGTGGTTGTGGATGATAATGAACCCGAGGAGCGCCTTCTTAACAGATTCCGGCGAGAG
GTTATGCGGGCCGGCGTGATTCAGGAGTGTAAGAGACGGAGATTCTTTGAGAACACTCAAGATGTTAGGAAGCGCAAGACTCGCGAGGCTGCTAAACGCAACCGCCGCAG
GCGGCCACAGGCAAGATTTACACCACAGAACAAGCAGGATGTGCCTGCAACAAAGCAAGAAGCTGATGATGACAACTGGGATTTACCTGAAGATGAGGACATTCCTAGTT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCTCTCCAGCTTCTTCTCCTTCCTCTTACCCTCTAAACCACCGCCCCCCAAGCCCCACCAGCCCTTCATTGCCTCCTCTCCTTCTCCGTCCAATCACGCCGC
CCCTCAGTTTCAAACACTGAAATCCAGGGATGGATCGGTTGCCCTAAACCCTCAACAGGGTCCCAACCATTCGGAGCCCTTATCCGCGGAATTGGCCTCCGTTATTTGTC
CCTCCCTAGCCTACGCCAACACAATGTTCTTCAGATCCGCATATAATGTTCAGGTGGTTGTGGATGATAATGAACCCGAGGAGCGCCTTCTTAACAGATTCCGGCGAGAG
GTTATGCGGGCCGGCGTGATTCAGGAGTGTAAGAGACGGAGATTCTTTGAGAACACTCAAGATGTTAGGAAGCGCAAGACTCGCGAGGCTGCTAAACGCAACCGCCGCAG
GCGGCCACAGGCAAGATTTACACCACAGAACAAGCAGGATGTGCCTGCAACAAAGCAAGAAGCTGATGATGACAACTGGGATTTACCTGAAGATGAGGACATTCCTAGTT
AA
Protein sequenceShow/hide protein sequence
MASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQGPNHSEPLSAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEERLLNRFRRE
VMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEDEDIPS