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Cucsat.G1569 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1569
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCOPII coat assembly protein SEC16, putative
Genome locationctg1000:1662058..1663443
RNA-Seq ExpressionCucsat.G1569
SyntenyCucsat.G1569
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07441.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa]4.40e-9394.9Show/hide
Query:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA
        MAKS+AQLTYPPPSPSLRRT FLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASA  AAVNSPTAASPANSPYEISIRNRLVKQA
Subjt:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA

Query:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC
        AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Subjt:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC

XP_008462609.1 PREDICTED: uncharacterized protein LOC103500927 [Cucumis melo]7.61e-9495.54Show/hide
Query:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA
        MAKS+AQLTYPPPSPSLRRTTFLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASA  AAVNSPTAASPANSPYEISIRNRLVKQA
Subjt:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA

Query:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC
        AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Subjt:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC

XP_011657724.1 early nodulin-20 [Cucumis sativus]3.92e-101100Show/hide
Query:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA
        MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA
Subjt:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA

Query:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF
        AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF
Subjt:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF

XP_022979075.1 uncharacterized protein LOC111478820 [Cucurbita maxima]5.48e-6777.16Show/hide
Query:  MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNR
        MAKS+AQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSSQSYTSLKDILPS   SA AVNSPTAASPANS YEI IRNR
Subjt:  MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNR

Query:  LVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC
        LVKQAAWAYLQPMSASSYSAGPN FHRF LRFSTGNPI SC GFIR  I+P+IIR FR CIC
Subjt:  LVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC

XP_038883302.1 uncharacterized protein LOC120074291 [Benincasa hispida]3.85e-7983.44Show/hide
Query:  MAKSSAQLTYPPPSPSL---RRTTFLPSSPMPPPN---PAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRN
        MAKS+AQ+TYPPPSPSL   R   F+PSSPMPPPN     VSPPPPPSPINL LLSFKSSSQSYTSLKDILPSASA   AVNSPTAASPANS YEISIRN
Subjt:  MAKSSAQLTYPPPSPSL---RRTTFLPSSPMPPPN---PAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRN

Query:  RLVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC
        RLVKQAAWAYLQPMSASSYSAGPNFFHRF LRFST NPIY C GFIR +I+PAIIR FRFCIC
Subjt:  RLVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC

TrEMBL top hitse value%identityAlignment
A0A0A0KHJ9 Uncharacterized protein1.90e-101100Show/hide
Query:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA
        MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA
Subjt:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA

Query:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF
        AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF
Subjt:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF

A0A1S3CHC6 uncharacterized protein LOC1035009273.69e-9495.54Show/hide
Query:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA
        MAKS+AQLTYPPPSPSLRRTTFLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASA  AAVNSPTAASPANSPYEISIRNRLVKQA
Subjt:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA

Query:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC
        AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Subjt:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC

A0A5A7SL81 Putative COPII coat assembly protein SEC163.69e-9495.54Show/hide
Query:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA
        MAKS+AQLTYPPPSPSLRRTTFLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASA  AAVNSPTAASPANSPYEISIRNRLVKQA
Subjt:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA

Query:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC
        AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Subjt:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC

A0A5D3C6C7 Putative COPII coat assembly protein SEC162.13e-9394.9Show/hide
Query:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA
        MAKS+AQLTYPPPSPSLRRT FLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASA  AAVNSPTAASPANSPYEISIRNRLVKQA
Subjt:  MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQA

Query:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC
        AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Subjt:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC

A0A6J1IS66 uncharacterized protein LOC1114788202.65e-6777.16Show/hide
Query:  MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNR
        MAKS+AQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSSQSYTSLKDILPS   SA AVNSPTAASPANS YEI IRNR
Subjt:  MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNR

Query:  LVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC
        LVKQAAWAYLQPMSASSYSAGPN FHRF LRFSTGNPI SC GFIR  I+P+IIR FR CIC
Subjt:  LVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52520.1 unknown protein1.8e-0739.82Show/hide
Query:  INLALLSFKSSSQS----YTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGF
        ++L L+S   SS+     YTSLKDILPS+S +  +     A + A S   I+IRNRLVKQAA +YLQP S  + S+ P+F  R          + S F  
Subjt:  INLALLSFKSSSQS----YTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGF

Query:  IRSSIVPAIIRAF
        + S+   A++R F
Subjt:  IRSSIVPAIIRAF

AT5G06280.1 unknown protein1.0e-0738.26Show/hide
Query:  PSPSLRRTTFLP--SSPMPPPNPAVSPPPPPSPINLALLSFKSSS-QSYTSLKDILPS---ASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQ
        P+  LRRT  +   ++  PP  P      PPS  +  L+S K SS  +YTSL+DI+ S   +S +  ++N   +   + +  +ISIRNRLVKQAA +YLQ
Subjt:  PSPSLRRTTFLP--SSPMPPPNPAVSPPPPPSPINLALLSFKSSS-QSYTSLKDILPS---ASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQ

Query:  P--MSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFR
        P  +++S  SAG  FF R  L  S G      F F+R  +   I ++FR
Subjt:  P--MSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFR

AT5G06280.3 unknown protein1.0e-0738.26Show/hide
Query:  PSPSLRRTTFLP--SSPMPPPNPAVSPPPPPSPINLALLSFKSSS-QSYTSLKDILPS---ASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQ
        P+  LRRT  +   ++  PP  P      PPS  +  L+S K SS  +YTSL+DI+ S   +S +  ++N   +   + +  +ISIRNRLVKQAA +YLQ
Subjt:  PSPSLRRTTFLP--SSPMPPPNPAVSPPPPPSPINLALLSFKSSS-QSYTSLKDILPS---ASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQ

Query:  P--MSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFR
        P  +++S  SAG  FF R  L  S G      F F+R  +   I ++FR
Subjt:  P--MSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCC
TCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCG
CCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCT
TCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGC
TATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCC
TCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCG
CCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCT
TCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGC
TATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA
Protein sequenceShow/hide protein sequence
MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSA
SSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF