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Cucsat.G15742 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15742
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationctg2009:4199921..4201607
RNA-Seq ExpressionCucsat.G15742
SyntenyCucsat.G15742
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062663.1 putative glycosyltransferase [Cucumis melo var. makuwa]2.97e-12584.79Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        ME+  I RPI TILDG+NYITWANQ+ SFLIGRKLWRIVTGDITKPT QDK  E D+KFIERLE+WDSKNHQIITWL NTSIPAIH QFDAF++AK+LW+
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKS+GLAHYYQLHN+LVNLNQ+ GQSVNEYLAVLQPIWTQLDQA+ISK+HLRLIKVLMGLRPEYESVRAALLHR+PLPSLDAAIQEILFEE+RLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTP
        IN +K SD VLASTY+P
Subjt:  INSTKQSDVVLASTYTP

KAA0064095.1 uncharacterized protein E6C27_scaffold99G001080 [Cucumis melo var. makuwa]4.05e-12782.95Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        ME+  I R I TILDG+NYITW NQI SFLIGRKLWRIVTGDITKPT QDK  E D KFI+RLE+WD+KNHQIITWL NTSIPAIH QFDAF+ +K+LWD
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKS+GLAHYYQLHN LVNLNQ  GQSVNEYL VLQPIWTQLDQA ISK+HLRLIKVLMGLRPEYESVRAALLH +PLPSLDAAIQEILFEEKRLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTP
        IN +K SDVVL STY+P
Subjt:  INSTKQSDVVLASTYTP

TYK29664.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]1.17e-12682.95Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        ME+  I RPI TILDG+NYITWANQ+ SFLIGRKLWRIVTGDITK T Q+K  E D+KFIE LE+WDSKNHQIITWL NTSIPAIH QFDAF++AK+LW+
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKS+GL HYYQLHN+LVNLNQD+GQSVNEYLAVLQPIWTQLDQA+ISK+HLRLIKVLMGL PEYESVRAALLHR+PLPSLDAAIQEILFEE+RLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTP
        IN +K SD VLASTY+P
Subjt:  INSTKQSDVVLASTYTP

XP_008449924.1 PREDICTED: uncharacterized protein LOC103491654 [Cucumis melo]6.45e-12783.87Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        ME+  I RPI TILDG+NYITWANQ+ SFLIGRKLWRIVTGDI K T QDK  E D KFIERLE+WD+KNHQIITWL NTSIPAIH QFDAF+ AK+LWD
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKS+ LAHYYQLHN LVNLNQ+ GQSVNEYLAVLQPIWTQLDQA+ISK+HLRLIKVLMGLRPEYESVRAALLHR+PLPSLDAAIQEILFEEKRLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTP
        IN +  SDVVLASTY+P
Subjt:  INSTKQSDVVLASTYTP

XP_031740126.1 uncharacterized protein LOC116403359 [Cucumis sativus]1.97e-14594.09Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        MERDHIFRPI TILDGTNYITWANQ+ SFLIGRKLWRIVTGDITKPTA    KEGDN FIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAK LWD
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKSIGLAHYYQLH+TLVNLNQD GQSVNEYLAVLQPIWTQLDQA+ISK+HLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTPNRA
        INSTKQSDVVLASTYTPNRA
Subjt:  INSTKQSDVVLASTYTPNRA

TrEMBL top hitse value%identityAlignment
A0A1S3BN45 uncharacterized protein LOC1034916543.12e-12783.87Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        ME+  I RPI TILDG+NYITWANQ+ SFLIGRKLWRIVTGDI K T QDK  E D KFIERLE+WD+KNHQIITWL NTSIPAIH QFDAF+ AK+LWD
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKS+ LAHYYQLHN LVNLNQ+ GQSVNEYLAVLQPIWTQLDQA+ISK+HLRLIKVLMGLRPEYESVRAALLHR+PLPSLDAAIQEILFEEKRLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTP
        IN +  SDVVLASTY+P
Subjt:  INSTKQSDVVLASTYTP

A0A5A7UM60 Retrovirus-related Pol polyprotein from transposon TNT 1-942.07e-12484.55Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        ME+  I RPI TILDG+NYITWANQ+ SFLIGRKLWRIVTGDITKPT QDK  E DNKFIERLE+WDSKNHQIITWL NTSIPAIH QFDAF++AK+LW+
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKS+GLAHYYQLHN+LVNLNQ+ GQSVNEYLAVLQPIWTQLDQA+ISK+HLRLIKVLMGLRPEYESVRAALLHR+PLPSLDAAIQEILFEE+RLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTPNRA
        IN +K SD VLASTY+P+ A
Subjt:  INSTKQSDVVLASTYTPNRA

A0A5A7V3S3 Putative glycosyltransferase1.44e-12584.79Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        ME+  I RPI TILDG+NYITWANQ+ SFLIGRKLWRIVTGDITKPT QDK  E D+KFIERLE+WDSKNHQIITWL NTSIPAIH QFDAF++AK+LW+
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKS+GLAHYYQLHN+LVNLNQ+ GQSVNEYLAVLQPIWTQLDQA+ISK+HLRLIKVLMGLRPEYESVRAALLHR+PLPSLDAAIQEILFEE+RLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTP
        IN +K SD VLASTY+P
Subjt:  INSTKQSDVVLASTYTP

A0A5D3D4M5 Uncharacterized protein1.96e-12782.95Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        ME+  I R I TILDG+NYITW NQI SFLIGRKLWRIVTGDITKPT QDK  E D KFI+RLE+WD+KNHQIITWL NTSIPAIH QFDAF+ +K+LWD
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKS+GLAHYYQLHN LVNLNQ  GQSVNEYL VLQPIWTQLDQA ISK+HLRLIKVLMGLRPEYESVRAALLH +PLPSLDAAIQEILFEEKRLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTP
        IN +K SDVVL STY+P
Subjt:  INSTKQSDVVLASTYTP

A0A5D3E1E2 Zinc finger, CCHC-type5.65e-12782.95Show/hide
Query:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD
        ME+  I RPI TILDG+NYITWANQ+ SFLIGRKLWRIVTGDITK T Q+K  E D+KFIE LE+WDSKNHQIITWL NTSIPAIH QFDAF++AK+LW+
Subjt:  MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWD

Query:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG
        FLSTRFKS+GL HYYQLHN+LVNLNQD+GQSVNEYLAVLQPIWTQLDQA+ISK+HLRLIKVLMGL PEYESVRAALLHR+PLPSLDAAIQEILFEE+RLG
Subjt:  FLSTRFKSIGLAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLG

Query:  INSTKQSDVVLASTYTP
        IN +K SD VLASTY+P
Subjt:  INSTKQSDVVLASTYTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGGACCATATTTTTAGACCCATTGGTACAATTCTTGATGGTACAAATTATATCACATGGGCAAATCAAATTAACAGTTTTCTTATTGGAAGAAAACTATGGCG
CATTGTAACTGGCGACATAACCAAACCAACTGCACAAGACAAGGACAAGGAAGGGGATAATAAATTCATTGAACGCCTCGAAGATTGGGACAGTAAAAATCATCAAATTA
TCACCTGGCTTGGTAACACCTCTATTCCCGCTATACATGCACAGTTTGATGCCTTTGATGATGCTAAAAAATTATGGGATTTTTTGTCTACACGCTTCAAGTCTATTGGT
TTAGCCCATTATTATCAACTGCACAATACACTTGTAAATCTAAATCAAGATATTGGTCAGTCTGTCAATGAATATTTGGCAGTTCTTCAACCCATTTGGACTCAGCTTGA
CCAAGCGAGCATCAGCAAAGAACATCTTCGCCTTATTAAAGTCCTTATGGGATTACGCCCAGAATATGAATCTGTTAGAGCTGCTTTACTACACCGGAATCCCTTACCCT
CTTTAGATGCAGCTATTCAAGAAATTCTGTTTGAAGAAAAGCGTCTTGGCATCAATTCTACTAAACAATCTGATGTTGTCCTTGCCAGCACATACACTCCCAACAGAGCC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGGACCATATTTTTAGACCCATTGGTACAATTCTTGATGGTACAAATTATATCACATGGGCAAATCAAATTAACAGTTTTCTTATTGGAAGAAAACTATGGCG
CATTGTAACTGGCGACATAACCAAACCAACTGCACAAGACAAGGACAAGGAAGGGGATAATAAATTCATTGAACGCCTCGAAGATTGGGACAGTAAAAATCATCAAATTA
TCACCTGGCTTGGTAACACCTCTATTCCCGCTATACATGCACAGTTTGATGCCTTTGATGATGCTAAAAAATTATGGGATTTTTTGTCTACACGCTTCAAGTCTATTGGT
TTAGCCCATTATTATCAACTGCACAATACACTTGTAAATCTAAATCAAGATATTGGTCAGTCTGTCAATGAATATTTGGCAGTTCTTCAACCCATTTGGACTCAGCTTGA
CCAAGCGAGCATCAGCAAAGAACATCTTCGCCTTATTAAAGTCCTTATGGGATTACGCCCAGAATATGAATCTGTTAGAGCTGCTTTACTACACCGGAATCCCTTACCCT
CTTTAGATGCAGCTATTCAAGAAATTCTGTTTGAAGAAAAGCGTCTTGGCATCAATTCTACTAAACAATCTGATGTTGTCCTTGCCAGCACATACACTCCCAACAGAGCC
TGA
Protein sequenceShow/hide protein sequence
MERDHIFRPIGTILDGTNYITWANQINSFLIGRKLWRIVTGDITKPTAQDKDKEGDNKFIERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKKLWDFLSTRFKSIG
LAHYYQLHNTLVNLNQDIGQSVNEYLAVLQPIWTQLDQASISKEHLRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILFEEKRLGINSTKQSDVVLASTYTPNRA