| GenBank top hits | e value | %identity | Alignment |
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| RVW34149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.24e-71 | 68.48 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
SHYVDKIL K+ K + +A+TP+D + HLSKN G+S++Q+EYSR+IGSLMY SCTRPDIAYAVSKLSRYTSNPG HW+ I+R+ L+ T++YGLHYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
RYP VLEGY D NWIS+ KD KS SGY+FTLG V KSSKQT I RSTMESEFIAL+K GE+A
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
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| RVW43864.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.70e-72 | 69.7 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
SHYVDKIL K+ K + +A+TP+D + HLSKN G+S++Q+EYSRIIGSLMY SCTRPDIAYAVSKLSRYTSNPG HW+ I+R+ L+ T++YGLHYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
RYP VLEGY D NWIS+ KDSKS SGY+FTLG V KSSKQT I RSTMESEFIAL+K GE+A
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
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| RVW82452.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.17e-71 | 69.09 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
SHYVDKIL K+ K + +A+TP+D + HLSKN G+S++Q+EYSR+IGSLMY SCTRPDIAYAVSKLSRYTSNPG HW+ I+R+ L+ T++YGLHYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
RYP VLEGY D NWIS+ KDSKS SGY+FTLG V KSSKQT I RSTMESEFIAL+K GE+A
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
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| RVX20630.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 8.20e-73 | 69.09 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
SHYVDKIL K+ K + +A+TP+D + HLSKN G+S++Q+EYSR+IGSLMY SCTRPDIAYAVSKLSRYTSNPG HW+ I+R+ L+ T++YGLHYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
RYP VLEGY D NWIS+ KDSKS SGY+FTLG V KSSKQT I RSTMESEFIAL+K GE+A
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
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| RVX20813.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.29e-71 | 69.51 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
SHYVDKIL K+ K + +A+TP+D + HLSKN G+S++Q+EYSR+IGSLMY SCTRPDIAYAVSKLSRYTSNPG HW+ I+R+ L+ T++YGLHYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGED
RYPVVLEGY D NWIS+ KDSKS SGY+FTLG V KSSKQT I RSTMESEFIAL+K GE+
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGED
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FE36 Uncharacterized protein | 1.75e-72 | 67.88 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
+HY+ K+L+K+ ++D KTP+D + HL+KN G+ I+QLEYS+IIGSLMY +CTRPDIAY+VSKLSRYTSNPG +HWKAI+R+ LK+T NYG+HYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
RYP VLEGY D NWIS T D+KSTSGY+FTLG V KSSKQTCI RSTMESEFIAL+K GE+A
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
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| A0A2N9FSE3 Reverse transcriptase Ty1/copia-type domain-containing protein | 3.20e-72 | 67.88 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
+HY+ K+L+K+ ++D KTPID + HL+KN G+ I+QLEYS+IIGSLMY +CTRPDIAY++SKLSRYTSNPG +HWKAI+R+ LK+T NYG+HYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
RYP VLEGY D NWIS T D+KSTSGY+FTLG V KSSKQTCI RSTMESEFIAL+K GE+A
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
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| A0A2N9HC87 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.32e-74 | 67.88 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
+HY+ K+L+K+ ++D KTPID + HL+KN G+ I+QLEYS+IIGSLMY +CTRPDIAY++SKLSRYTSNPG +HWKAI+R+ LK+T NYG+HYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
RYP VLEGY D NWIS T D+KSTSGY+FTLG V KSSKQTCI RSTMESEFIAL+K GE+A
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
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| A0A438E897 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.31e-72 | 69.7 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
SHYVDKIL K+ K + +A+TP+D + HLSKN G+S++Q+EYSRIIGSLMY SCTRPDIAYAVSKLSRYTSNPG HW+ I+R+ L+ T++YGLHYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
RYP VLEGY D NWIS+ KDSKS SGY+FTLG V KSSKQT I RSTMESEFIAL+K GE+A
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
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| A0A438KHF7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.97e-73 | 69.09 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
SHYVDKIL K+ K + +A+TP+D + HLSKN G+S++Q+EYSR+IGSLMY SCTRPDIAYAVSKLSRYTSNPG HW+ I+R+ L+ T++YGLHYT
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
RYP VLEGY D NWIS+ KDSKS SGY+FTLG V KSSKQT I RSTMESEFIAL+K GE+A
Subjt: RYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGEDA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.5e-17 | 31.95 | Show/hide |
Query: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
S YV KIL K+ + TP+ + N D +IG LMY CTRPD+ AV+ LSRY+S W+ + R+ LK T + L +
Subjt: SHYVDKILKKYTKHDIVIAKTPIDGSFHLSKNNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYT
Query: R---YPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSK-QTCITRSTMESEFIALNKVGEDA
+ + + GY+D +W S D KST+GY+F + + ++K Q + S+ E+E++AL + +A
Subjt: R---YPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSK-QTCITRSTMESEFIALNKVGEDA
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| P0CV72 Secreted RxLR effector protein 161 | 5.9e-19 | 38.4 | Show/hide |
Query: YSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYTRYPVV-LEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKS
Y +G++MY TRPD+A AV LS++ S+P HW+A+ R+ L+ T+ YGL +TR L GY D +W + +STSGY+F L V +S
Subjt: YSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYTRYPVV-LEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKS
Query: SKQTCITRSTMESEFIALNKVGEDA
KQ + S+ E E++AL++ ++A
Subjt: SKQTCITRSTMESEFIALNKVGEDA
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-24 | 33.73 | Show/hide |
Query: YVDKILKKYTKHDIVIAKTPIDGSFHLSK-------NNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNY
Y++++L+++ + TP+ G LSK ++A++ YS +GSLMY+ CTRPDIA+AV +SR+ NPG HW+A+ I L+ T
Subjt: YVDKILKKYTKHDIVIAKTPIDGSFHLSK-------NNGDSIAQLEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNY
Query: GLHYTRYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGED
L + +L+GY D + + KS++GY+FT + +S Q C+ ST E+E+IA + G++
Subjt: GLHYTRYPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEFIALNKVGED
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.8e-15 | 35.71 | Show/hide |
Query: ILKKYTKHDIVIAK---TPIDGSFHLSKNNGDSIAQ-LEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYTR-
IL + +++ AK TP+ S LS +G + EY I+GSL Y + TRPDI+YAV++LS++ P H +A+ RI L T N+G+ +
Subjt: ILKKYTKHDIVIAK---TPIDGSFHLSKNNGDSIAQ-LEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYTR-
Query: YPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEF
+ L Y D +W D ST+GYI LG + S KQ + RS+ E+E+
Subjt: YPVVLEGYIDVNWISSTKDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.6e-16 | 36.5 | Show/hide |
Query: TPIDGSFHLSKNNGDSIAQ-LEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYTR-YPVVLEGYIDVNWISST
TP+ S L+ ++G + EY I+GSL Y + TRPD++YAV++LS+Y P +HW A+ R+ L T ++G+ + + L Y D +W T
Subjt: TPIDGSFHLSKNNGDSIAQ-LEYSRIIGSLMYSTSCTRPDIAYAVSKLSRYTSNPGHNHWKAILRIWGCLKHTKNYGLHYTR-YPVVLEGYIDVNWISST
Query: KDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEF
D ST+GYI LG + S KQ + RS+ E+E+
Subjt: KDSKSTSGYIFTLGSDGVFRKSSKQTCITRSTMESEF
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