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Cucsat.G15914 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15914
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionprotein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like
Genome locationctg2174:289950..296037
RNA-Seq ExpressionCucsat.G15914
SyntenyCucsat.G15914
Gene Ontology termsGO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006936 - ALOG domain
IPR040222 - ALOG family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5557574.1 hypothetical protein DKX38_008483 [Salix brachista]1.61e-7396.49Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGG PEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSSP
        RKRP QQQI QS P
Subjt:  RKRPQQQQIAQSSP

XP_008447416.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucumis melo]2.95e-77100Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSS
        RKRPQQQQIAQSS
Subjt:  RKRPQQQQIAQSS

XP_011651439.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 [Cucumis sativus]2.23e-82100Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSSPKAKKDY
        RKRPQQQQIAQSSPKAKKDY
Subjt:  RKRPQQQQIAQSSPKAKKDY

XP_022963938.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita moschata]1.89e-7495.61Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSSP
        RKRPQQQ+  Q  P
Subjt:  RKRPQQQQIAQSSP

XP_038887548.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Benincasa hispida]3.28e-7497.37Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQ--IAQS
        RKRPQQQQ  I+QS
Subjt:  RKRPQQQQ--IAQS

TrEMBL top hitse value%identityAlignment
A0A0A0LB62 ALOG domain-containing protein1.43e-77100Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSS
        RKRPQQQQIAQSS
Subjt:  RKRPQQQQIAQSS

A0A1S3BHE8 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like1.43e-77100Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSS
        RKRPQQQQIAQSS
Subjt:  RKRPQQQQIAQSS

A0A5D3BLY0 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like1.43e-77100Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSS
        RKRPQQQQIAQSS
Subjt:  RKRPQQQQIAQSS

A0A6J1HLN0 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like9.17e-7595.61Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSSP
        RKRPQQQ+  Q  P
Subjt:  RKRPQQQQIAQSSP

A0A6J1HQU3 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like9.17e-7595.61Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSSP
        RKRPQQQ+  Q  P
Subjt:  RKRPQQQQIAQSSP

SwissProt top hitse value%identityAlignment
A2XAV5 Protein G1-like64.6e-5389.42Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFL+Y+DQFGKTKVHTP+CPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFGARAVRLYLREVR+ Q++ARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRP
        RK+P
Subjt:  RKRP

A2XVI8 Protein G1-like41.0e-5286.24Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHT  CPF+GHP+PPAPCPCPLRQAWGSLDAL+GRLRAAFEENGG PE+NPF ARAVRLYLREVR+ Q++ARG+SYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQI
        RK+PQQQQ+
Subjt:  RKRPQQQQI

O82268 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 31.6e-5388.5Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHT IC FYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGG PE NPFGARAVRLYLREVRD+QSKARG+SYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSS
        RKRP       SS
Subjt:  RKRPQQQQIAQSS

Q6K5X1 Protein G1-like64.6e-5389.42Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFL+Y+DQFGKTKVHTP+CPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFGARAVRLYLREVR+ Q++ARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRP
        RK+P
Subjt:  RKRP

Q7XRS1 Protein G1-like41.0e-5286.24Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHT  CPF+GHP+PPAPCPCPLRQAWGSLDAL+GRLRAAFEENGG PE+NPF ARAVRLYLREVR+ Q++ARG+SYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQI
        RK+PQQQQ+
Subjt:  RKRPQQQQI

Arabidopsis top hitse value%identityAlignment
AT1G07090.1 Protein of unknown function (DUF640)3.8e-4778.85Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHV+EFL+YLDQFGKTKVH   CP++GH  PP+PC CPL+QAWGSLDALIGRLRAA+EENGG P++NPF ARAVR+YLREVR+ Q+KARGI YEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRP
        RKRP
Subjt:  RKRP

AT2G31160.1 Protein of unknown function (DUF640)1.1e-5488.5Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHT IC FYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGG PE NPFGARAVRLYLREVRD+QSKARG+SYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSS
        RKRP       SS
Subjt:  RKRPQQQQIAQSS

AT3G04510.1 Protein of unknown function (DUF640)1.0e-4775.21Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVL+FLRYLDQFGKTKVH   C F+G PNPPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE +PFG+R+VR++LREVRD Q+K+RG+SYE KK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRPQQQQIAQSSPKAK
        RKR   +QI QS P+++
Subjt:  RKRPQQQQIAQSSPKAK

AT3G23290.2 Protein of unknown function (DUF640)9.5e-5492.31Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVHT +CPF+GHPNPPAPC CPLRQAWGSLDALIGRLRAAFEENGG PE NPFGARAVRLYLREVRD Q+KARGISYEKKK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  RKRP
        RKRP
Subjt:  RKRP

AT5G28490.1 Protein of unknown function (DUF640)3.5e-4881.08Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK
        CSGAHVLEFLRYLDQFGKTKVH   C F+G PNPPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PEANPFG+RAVRL+LREVRD Q+KARG+SYEKK+
Subjt:  CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKK

Query:  ----RKRPQQQ
            R++PQ Q
Subjt:  ----RKRPQQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTAGTGGAGCTCACGTTCTTGAATTCCTAAGATATTTAGATCAATTTGGTAAAACAAAAGTTCATACACCAATTTGTCCATTTTATGGTCATCCTAACCCACCTGCCCC
TTGCCCTTGTCCTTTAAGACAAGCTTGGGGCAGCCTTGATGCTCTTATTGGGAGACTAAGGGCAGCTTTTGAAGAGAATGGCGGGATGCCCGAAGCTAACCCTTTTGGTG
CCCGAGCTGTACGGCTTTATCTACGAGAGGTTCGTGATTTGCAATCTAAAGCAAGAGGAATTAGTTATGAGAAGAAGAAAAGAAAGCGTCCTCAGCAACAACAAATTGCT
CAATCAAGTCCAAAAGCCAAAAAAGATTATTAG
mRNA sequenceShow/hide mRNA sequence
TGTAGTGGAGCTCACGTTCTTGAATTCCTAAGATATTTAGATCAATTTGGTAAAACAAAAGTTCATACACCAATTTGTCCATTTTATGGTCATCCTAACCCACCTGCCCC
TTGCCCTTGTCCTTTAAGACAAGCTTGGGGCAGCCTTGATGCTCTTATTGGGAGACTAAGGGCAGCTTTTGAAGAGAATGGCGGGATGCCCGAAGCTAACCCTTTTGGTG
CCCGAGCTGTACGGCTTTATCTACGAGAGGTTCGTGATTTGCAATCTAAAGCAAGAGGAATTAGTTATGAGAAGAAGAAAAGAAAGCGTCCTCAGCAACAACAAATTGCT
CAATCAAGTCCAAAAGCCAAAAAAGATTATTAG
Protein sequenceShow/hide protein sequence
CSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQQQIA
QSSPKAKKDY