CuGenDBv2

Gene ID	Cucsat.G15963
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	zinc finger CCCH domain-containing protein 62-like
Genome location	ctg2178:425873..428881
RNA-Seq Expression	Cucsat.G15963
Synteny	Cucsat.G15963
Gene Ontology terms	GO:0006807 - nitrogen compound metabolic process (biological process) GO:0044238 - primary metabolic process (biological process) GO:0044260 - cellular macromolecule metabolic process (biological process)
InterPro domains	IPR003034 - SAP domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0045864.1 zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo var. makuwa]

5.98e-74

86.45

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Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN
        M+KRGSKRTVICISSSS  D DEEES EYDDEDDGVGDSEEEF D+DD         DEGESGEEFD+EESDNGCDE VLSKRVIRFLKENKNLDSLTLN
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN

Query:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        DCKAYLRE+RLRIAGTKAVCIQRVKEHWRLKDG+GEVQYP+SSFVVNCTGDVCRG
Subjt:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

KGN62051.1 hypothetical protein Csa_006128 [Cucumis sativus]

4.81e-87

98.62

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Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESR
        MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESR
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESR

Query:  LRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        LRIAGTKAVCIQRVKEHWRLK+G+GEVQYPKSSFVVNCTGDVCRG
Subjt:  LRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

XP_016902186.1 PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X3 [Cucumis melo]

9.96e-74

86.45

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Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN
        M+KRGSKRTVICISSSS  D DEEES EYDDEDDGVGDSEEEF D+DD         DEGESGEEFD+EESDNGCDE VLSKRVIRFLKENKNLDSLTLN
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN

Query:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        DCKAYLRE+RLRIAGTKAVCIQRVKEHWRLKDG+GEVQYP+SSFVVNCTGDVCRG
Subjt:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

XP_016902187.1 PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X4 [Cucumis melo]

4.98e-74

86.45

Show/hide

Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN
        M+KRGSKRTVICISSSS  D DEEES EYDDEDDGVGDSEEEF D+DD         DEGESGEEFD+EESDNGCDE VLSKRVIRFLKENKNLDSLTLN
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN

Query:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        DCKAYLRE+RLRIAGTKAVCIQRVKEHWRLKDG+GEVQYP+SSFVVNCTGDVCRG
Subjt:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

XP_031736645.1 zinc finger CCCH domain-containing protein 62 isoform X1 [Cucumis sativus]

6.41e-87

98.62

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Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESR
        MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESR
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESR

Query:  LRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        LRIAGTKAVCIQRVKEHWRLK+G+GEVQYPKSSFVVNCTGDVCRG
Subjt:  LRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQ19 SAP domain-containing protein

2.33e-87

98.62

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Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESR
        MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESR
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESR

Query:  LRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        LRIAGTKAVCIQRVKEHWRLK+G+GEVQYPKSSFVVNCTGDVCRG
Subjt:  LRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

A0A1S4E1S9 zinc finger CCCH domain-containing protein 62-like isoform X1

6.48e-74

86.45

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Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN
        M+KRGSKRTVICISSSS  D DEEES EYDDEDDGVGDSEEEF D+DD         DEGESGEEFD+EESDNGCDE VLSKRVIRFLKENKNLDSLTLN
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN

Query:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        DCKAYLRE+RLRIAGTKAVCIQRVKEHWRLKDG+GEVQYP+SSFVVNCTGDVCRG
Subjt:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

A0A1S4E1T3 zinc finger CCCH domain-containing protein 62-like isoform X3

4.82e-74

86.45

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Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN
        M+KRGSKRTVICISSSS  D DEEES EYDDEDDGVGDSEEEF D+DD         DEGESGEEFD+EESDNGCDE VLSKRVIRFLKENKNLDSLTLN
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN

Query:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        DCKAYLRE+RLRIAGTKAVCIQRVKEHWRLKDG+GEVQYP+SSFVVNCTGDVCRG
Subjt:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

A0A1S4E1T6 zinc finger CCCH domain-containing protein 62-like isoform X4

2.41e-74

86.45

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Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN
        M+KRGSKRTVICISSSS  D DEEES EYDDEDDGVGDSEEEF D+DD         DEGESGEEFD+EESDNGCDE VLSKRVIRFLKENKNLDSLTLN
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN

Query:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        DCKAYLRE+RLRIAGTKAVCIQRVKEHWRLKDG+GEVQYP+SSFVVNCTGDVCRG
Subjt:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

A0A5A7TS31 Zinc finger CCCH domain-containing protein 62-like isoform X1

2.89e-74

86.45

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Query:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN
        M+KRGSKRTVICISSSS  D DEEES EYDDEDDGVGDSEEEF D+DD         DEGESGEEFD+EESDNGCDE VLSKRVIRFLKENKNLDSLTLN
Subjt:  MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDD---------DEGESGEEFDNEESDNGCDE-VLSKRVIRFLKENKNLDSLTLN

Query:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        DCKAYLRE+RLRIAGTKAVCIQRVKEHWRLKDG+GEVQYP+SSFVVNCTGDVCRG
Subjt:  DCKAYLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G66840.1 SAP domain-containing protein

1.1e-19

40.4

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Query:  SKRTVICISSSSSSDAD-------EEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFD----NEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKA
        +++ +I + SS   + D        +E+EE +DED    + + ++   DDD  ES  E D      ++D+G ++    +V R L    +L S+ + +CKA
Subjt:  SKRTVICISSSSSSDAD-------EEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFD----NEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKA

Query:  YLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG
        YLR+  LR++GTK VCI R+ EHWR+KDG GE  YPKSSF +NC GDVC+G
Subjt:  YLRESRLRIAGTKAVCIQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRG

Sequences

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CDS sequence

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ATGACTAAAAGGGGTAGCAAACGGACAGTCATTTGCATCTCGTCGTCGTCGTCGTCGGATGCCGACGAAGAAGAATCGGAGGAGTATGATGATGAAGACGATGGCGTAGG
GGATTCGGAAGAGGAGTTTGATGATAAAGACGATGACGAAGGGGAATCGGGAGAGGAGTTTGATAATGAAGAGAGCGACAATGGTTGCGATGAAGTTCTATCCAAGCGAG
TCATACGCTTCCTTAAAGAGAACAAAAATTTGGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAGTAGGCTAAGAATAGCGGGTACTAAAGCCGTATGT
ATTCAAAGAGTCAAGGAACACTGGAGGTTGAAAGATGGAGATGGTGAAGTTCAATATCCAAAGTCATCCTTCGTTGTCAATTGTACAGGTGATGTTTGTAGGGGGGGATA
CTGTTCTGTTCACTCAGAAAGTTTATGCAAAGTACCCAAACAACTAACTCTTCCACCACTATCCTTGTGCTATATATTTTGGACTATACTTCTAATTCTTGTAGTTTACT
TCTTAATAGGTTTGATAAAGTAA

mRNA sequence

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Protein sequence

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MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKAVC
IQRVKEHWRLKDGDGEVQYPKSSFVVNCTGDVCRGGYCSVHSESLCKVPKQLTLPPLSLCYIFWTILLILVVYFLIGLIK

Cucsat.G15963 (gene) of Cucumber (B10) v3 genome