; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G15966 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15966
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPol protein
Genome locationctg2178:483285..492701
RNA-Seq ExpressionCucsat.G15966
SyntenyCucsat.G15966
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041424.1 pol protein [Cucumis melo var. makuwa]3.28e-16886.57Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCR+PVCW EVGE RLMGPELV+STNEA+
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F+VG+KVFLKVAPMKGV+RFE++GKLSPRFVGPFEILERVG VAYRL LPPSLSAVH+VFHVSMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVD EPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYP+LF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

KAA0043401.1 pol protein [Cucumis melo var. makuwa]1.30e-16886.19Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYG+CCR+PVCW EVGE RLMGPELV+STNEAI
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F++G+KVFLKVAPMKGV+RFE++GKLSPRFVGPFEILER+G VAYRL LPPSLSAVH+VFH+SMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVDYEPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

KAA0050751.1 pol protein [Cucumis melo var. makuwa]1.14e-17086.94Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCR+PVCW EVGE RLMGPELV+STNEAI
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F+VG+KVFLKVAPMKGV+RFE++GKLSPRFVGPFEILER+G VAYRL LPPSLS VH+VFHVSMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVDYEPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

KAA0054731.1 pol protein [Cucumis melo var. makuwa]1.33e-16986.19Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFP SWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCR+PVCW EVGE RLMGPELV+STNEAI
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F++G+KVFLKVAPMKGV+RFE++GKLSPRFVGPFEILER+G VAYRL LPPSLS VH+VFHVSMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVDYEPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

KAA0063119.1 pol protein [Cucumis melo var. makuwa]1.62e-17086.19Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCR+PVCW EVGE RLMGPELV+STNEAI
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F++G+KVFLKVAPMKGV+RFE++GKLSPRFVGPFE+LER+G VAYRL LPPSLS VHNVFHVSMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVDYEPLEID++LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

TrEMBL top hitse value%identityAlignment
A0A5A7TDB5 Pol protein1.59e-16886.57Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCR+PVCW EVGE RLMGPELV+STNEA+
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F+VG+KVFLKVAPMKGV+RFE++GKLSPRFVGPFEILERVG VAYRL LPPSLSAVH+VFHVSMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVD EPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYP+LF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

A0A5A7TPA9 Pol protein6.30e-16986.19Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYG+CCR+PVCW EVGE RLMGPELV+STNEAI
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F++G+KVFLKVAPMKGV+RFE++GKLSPRFVGPFEILER+G VAYRL LPPSLSAVH+VFH+SMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVDYEPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

A0A5A7UB07 Pol protein5.53e-17186.94Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCR+PVCW EVGE RLMGPELV+STNEAI
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F+VG+KVFLKVAPMKGV+RFE++GKLSPRFVGPFEILER+G VAYRL LPPSLS VH+VFHVSMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVDYEPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

A0A5A7UMF1 Pol protein6.45e-17086.19Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFP SWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCR+PVCW EVGE RLMGPELV+STNEAI
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F++G+KVFLKVAPMKGV+RFE++GKLSPRFVGPFEILER+G VAYRL LPPSLS VH+VFHVSMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVDYEPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

A0A5A7VBY8 Pol protein7.85e-17186.19Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCR+PVCW EVGE RLMGPELV+STNEAI
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAI

Query:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH
        Q IR+RM T QSRQKSYADVRRKDL+F++G+KVFLKVAPMKGV+RFE++GKLSPRFVGPFE+LER+G VAYRL LPPSLS VHNVFHVSMLRKYV D SH
Subjt:  QTIRTRMQTTQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSH

Query:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD
        VVDYEPLEID++LSYVEQPVE+LAREVK LRN+ IPLVKVLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.7e-2129.1Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + T +  QT+
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI

Query:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--
        +  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS L KY  ++   
Subjt:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--

Query:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW
           +D   +    H+   +   ++L   VK + N +   +   W
Subjt:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW

P0CT35 Transposon Tf2-2 polyprotein2.7e-2129.1Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + T +  QT+
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI

Query:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--
        +  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS L KY  ++   
Subjt:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--

Query:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW
           +D   +    H+   +   ++L   VK + N +   +   W
Subjt:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW

P0CT36 Transposon Tf2-3 polyprotein2.7e-2129.1Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + T +  QT+
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI

Query:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--
        +  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS L KY  ++   
Subjt:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--

Query:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW
           +D   +    H+   +   ++L   VK + N +   +   W
Subjt:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW

P0CT41 Transposon Tf2-12 polyprotein2.7e-2129.1Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + T +  QT+
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI

Query:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--
        +  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS L KY  ++   
Subjt:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--

Query:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW
           +D   +    H+   +   ++L   VK + N +   +   W
Subjt:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW

Q9UR07 Transposon Tf2-11 polyprotein2.7e-2129.1Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + T +  QT+
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTI

Query:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--
        +  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS L KY  ++   
Subjt:  RTRMQTTQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAV-HNVFHVSMLRKYVADTS--

Query:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW
           +D   +    H+   +   ++L   VK + N +   +   W
Subjt:  -HVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTACGAGATTGGATTTCAGTACAGCCTTTCATCCACAGACTGATGGTCAAACTGAACGTTTGAACCAAGTTTTAGAGGATATGCTACGAGCTTGTGTTATAGAGTT
TCCAGGTAGTTGGGACTCTCATCTACATTTGATGGAGTTTGCTTATAACAACAGTTTCCAGGCTACCATCGGTATGGCACCATTTGAGGCTTTGTATGGCAAATGTTGTA
GAACCCCTGTTTGTTGGAGTGAGGTTGGTGAACATAGATTGATGGGACCTGAATTAGTTCGGTCTACTAATGAGGCTATTCAAACGATTAGGACGCGTATGCAAACAACG
CAGAGCAGACAGAAGAGTTATGCAGATGTACGGCGAAAAGACCTTAAGTTCGATGTGGGAGAAAAGGTATTCTTGAAGGTAGCACCTATGAAGGGTGTTATGCGTTTTGA
GAAGAAAGGGAAGTTAAGTCCTCGTTTTGTTGGACCATTTGAGATCTTAGAGAGGGTTGGTGTTGTGGCGTATCGCTTGACATTACCACCATCACTCTCTGCAGTTCATA
ATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCCGATACATCTCATGTAGTGGACTATGAACCCTTGGAGATTGATGAGCATTTGAGCTACGTAGAACAACCTGTG
GAAATTCTGGCTAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAGTAAAAGTTTTGTGGCGGAATCATCGAATGGAAGAGGCGACATGGGAGCGAGAGGAAGA
AATGAGGACTCGTTATCCAGAGTTATTTCAGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTACGAGATTGGATTTCAGTACAGCCTTTCATCCACAGACTGATGGTCAAACTGAACGTTTGAACCAAGTTTTAGAGGATATGCTACGAGCTTGTGTTATAGAGTT
TCCAGGTAGTTGGGACTCTCATCTACATTTGATGGAGTTTGCTTATAACAACAGTTTCCAGGCTACCATCGGTATGGCACCATTTGAGGCTTTGTATGGCAAATGTTGTA
GAACCCCTGTTTGTTGGAGTGAGGTTGGTGAACATAGATTGATGGGACCTGAATTAGTTCGGTCTACTAATGAGGCTATTCAAACGATTAGGACGCGTATGCAAACAACG
CAGAGCAGACAGAAGAGTTATGCAGATGTACGGCGAAAAGACCTTAAGTTCGATGTGGGAGAAAAGGTATTCTTGAAGGTAGCACCTATGAAGGGTGTTATGCGTTTTGA
GAAGAAAGGGAAGTTAAGTCCTCGTTTTGTTGGACCATTTGAGATCTTAGAGAGGGTTGGTGTTGTGGCGTATCGCTTGACATTACCACCATCACTCTCTGCAGTTCATA
ATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCCGATACATCTCATGTAGTGGACTATGAACCCTTGGAGATTGATGAGCATTTGAGCTACGTAGAACAACCTGTG
GAAATTCTGGCTAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAGTAAAAGTTTTGTGGCGGAATCATCGAATGGAAGAGGCGACATGGGAGCGAGAGGAAGA
AATGAGGACTCGTTATCCAGAGTTATTTCAGGATTAG
Protein sequenceShow/hide protein sequence
MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRSTNEAIQTIRTRMQTT
QSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPFEILERVGVVAYRLTLPPSLSAVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPV
EILAREVKMLRNRSIPLVKVLWRNHRMEEATWEREEEMRTRYPELFQD