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Cucsat.G16005 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16005
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionC2H2-type domain-containing protein
Genome locationctg2178:327420..328176
RNA-Seq ExpressionCucsat.G16005
SyntenyCucsat.G16005
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651931.1 hypothetical protein Csa_006531, partial [Cucumis sativus]1.92e-6999.07Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQNKNEREAMEIEGHGILGENKSFRKKS
        MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK NKNEREAMEIEGHGILGENKSFRKKS
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQNKNEREAMEIEGHGILGENKSFRKKS

Query:  RKGVPRRA
        RKGVPRRA
Subjt:  RKGVPRRA

KAG6571418.1 hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]2.07e-3258.04Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK
        MDDKS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK N K+E+EAME E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPF
        ++RKG+P RAPF
Subjt:  KSRKGVPRRAPF

KAG7011182.1 hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]8.40e-3257.14Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK
        MD+KS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK N K+E+EAME E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPF
        ++RKG+P RAPF
Subjt:  KSRKGVPRRAPF

XP_022928048.1 uncharacterized protein LOC111434950 [Cucurbita moschata]1.03e-3257.52Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK
        MD+KS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK N K+EREA E E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPFF
        ++RKG+P RAPFF
Subjt:  KSRKGVPRRAPFF

XP_023511836.1 uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]3.59e-3358.41Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK
        MDDKS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK N K+E+EAME E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPFF
        ++RKG+P RAPFF
Subjt:  KSRKGVPRRAPFF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ06 C2H2-type domain-containing protein1.29e-7299.1Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQNKNEREAMEIEGHGILGENKSFRKKS
        MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK NKNEREAMEIEGHGILGENKSFRKKS
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQNKNEREAMEIEGHGILGENKSFRKKS

Query:  RKGVPRRAPFF
        RKGVPRRAPFF
Subjt:  RKGVPRRAPFF

A0A6J1D739 uncharacterized protein LOC1110179592.03e-2655.93Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTH-KHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK-QNKNEREAMEIEG-HGILGEN----
        MDDKSLPYNLRLRK   +S+PTE SK + KH+RDFQEK  ++      + ++ RCEKCGC F IE SL SHHCK +NK   E ME +    +L +N    
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTH-KHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK-QNKNEREAMEIEG-HGILGEN----

Query:  KSFRKKSRKGVPRRAPFF
        KSFRK+SRKG+P RAP F
Subjt:  KSFRKKSRKGVPRRAPFF

A0A6J1EMR9 uncharacterized protein LOC1114349504.97e-3357.52Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK
        MD+KS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK N K+EREA E E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQN-KNEREAMEIEGHGILGENKSFRK

Query:  KSRKGVPRRAPFF
        ++RKG+P RAPFF
Subjt:  KSRKGVPRRAPFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAATGGATGACAAATCTCTTCCTTATAACCTTCGACTAAGGAAAGATCACAAGTCTTCTTCTCCAACTGAACACTCCAAAACTCATAAACATGACAGAGATTTTCAGGA
AAAGGCAAGTGATGATCAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGCTCACACCATTGTA
AACAGAATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGGAATTTTAGGAGAGAACAAATCTTTCAGAAAAAAAAGCAGGAAGGGGGTACCAAGAAGAGCACCT
TTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ACAATGGATGACAAATCTCTTCCTTATAACCTTCGACTAAGGAAAGATCACAAGTCTTCTTCTCCAACTGAACACTCCAAAACTCATAAACATGACAGAGATTTTCAGGA
AAAGGCAAGTGATGATCAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGCTCACACCATTGTA
AACAGAATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGGAATTTTAGGAGAGAACAAATCTTTCAGAAAAAAAAGCAGGAAGGGGGTACCAAGAAGAGCACCT
TTCTTTTAG
Protein sequenceShow/hide protein sequence
TMDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKQNKNEREAMEIEGHGILGENKSFRKKSRKGVPRRAP
FF