CuGenDBv2

Gene ID	Cucsat.G16007
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Genome location	ctg2178:359249..361388
RNA-Seq Expression	Cucsat.G16007
Synteny	Cucsat.G16007
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605258.1 hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia]

6.65e-89

80.9

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS
        MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKKGE VED+AE PR++D++SKLG LPSN+VQLL + EKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPA K K KRKK+KSSGI+TVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

KAG7035221.1 hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.64e-89

81.46

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS
        MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKKGE VED+AE PR++D++SKLG LPSN+VQLL + EKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPA K K KRKK+KSSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

XP_004148046.1 uncharacterized protein LOC101208336 [Cucumis sativus]

1.59e-112

99.44

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVD EKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

XP_008457855.1 PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo]

1.77e-107

95.53

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDK+SKLGTLPSN+VQLLVD EKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTKSS GIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

XP_038901892.1 uncharacterized protein LOC120088571 [Benincasa hispida]

1.66e-96

87.71

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRND-DKISKLGTLPSNIVQLLVDCEKQVF
        MSDRE+TDSDAPEEFTAEQGVQQDEEIRKVQKESKARV+REGKERRRLWAEKKTPRPSKKGE VEDLAEPPR+  D+ISKLG LPSNIVQLLVD EKQVF
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRND-DKISKLGTLPSNIVQLLVDCEKQVF

Query:  SSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SSD  DEKPAIKPK KRKKTKSSGIETVLL+ERTPS CL NSLEFLKKRKMN+ RSS+VL NPNQA RLLS+SGLL KK
Subjt:  SSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LM07 Uncharacterized protein

7.72e-113

99.44

Show/hide

Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVD EKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

A0A1S3C749 uncharacterized protein LOC103497440

8.58e-108

95.53

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDK+SKLGTLPSN+VQLLVD EKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTKSS GIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

A0A5A7TWK6 Uncharacterized protein

8.58e-108

95.53

Show/hide

Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS
        MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDK+SKLGTLPSN+VQLLVD EKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTKSS GIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

A0A6J1DXW1 uncharacterized protein LOC111025162

1.31e-88

80.79

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS
        MSD E+TDSDAPEEFTAEQG+QQD+EI KVQ ESKARV+REGKERRRLWAEKKTPRPSKKGE VED+AE P + D+ SKLG LPSN+VQLL D EKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTK
        SD GDEKPA KPK KRKKTKSSGIETV+LN+R P+ CLQNS+EFLKKRKMN+ RSS+VL NPNQA R LSSSGLLTK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTK

A0A6J1G7P4 uncharacterized protein LOC111451498

9.22e-89

80.9

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Query:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS
        MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK E VED+AE PR++D++SKLG LPSN+VQLL + EKQVFS
Subjt:  MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFS

Query:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        SD GDEKPA K K KRKK+KSSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Subjt:  SDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G37090.1 unknown protein

4.1e-29

45.36

Show/hide

Query:  MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDCE
        MSD +  ++DSDAPEE T EQ   ++E + K+Q+E+K RV RE KERR+L AE+ T R S+K EI+ED+    EP  N + ++  G L  +I+  L + E
Subjt:  MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDCE

Query:  KQVFSSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        KQ   SDS +E+  I    ++KK KSSGIETV+  E  P  CL+  L+FLK R+  V RSS+V+ N  QA RL + + L  K+
Subjt:  KQVFSSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

AT4G37090.2 unknown protein

1.0e-27

45.36

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Query:  MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDCE
        MSD +  ++DSDAPEE T EQ   ++E + K+Q+E+K RV RE KERR+L AE+ T R S+K EI+ED+    EP  N + ++  G L  +I+  L + E
Subjt:  MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDCE

Query:  KQVFSSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
        KQ   SDS +E+  I    ++KK KSSGIETV+  E  P  CL+  L+FLK R+  V RSS+V+ N  QA RL + + L  K+
Subjt:  KQVFSSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

Sequences

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CDS sequence

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ATGTCGGACAGAGAGGAAACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGGAGTACAACAAGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAG
GGTTATTCGTGAAGGAAAAGAACGTCGTAGACTATGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACCTCCTAGAAATG
ACGACAAAATTAGCAAATTGGGAACGCTTCCTAGTAATATAGTCCAACTGCTTGTAGACTGTGAGAAACAAGTTTTCTCATCAGATTCGGGCGATGAAAAGCCAGCAATT
AAACCAAAACAAAAGAGGAAGAAGACCAAAAGCTCCGGGATTGAAACGGTTCTTTTAAATGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAA
AAGGAAGATGAATGTTGCAAGATCATCAACGGTTCTCAGCAATCCTAATCAAGCGTTCCGGCTACTTTCTTCATCTGGCTTACTAACGAAGAAATAG

mRNA sequence

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Protein sequence

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MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDCEKQVFSSDSGDEKPAI
KPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK

Cucsat.G16007 (gene) of Cucumber (B10) v3 genome