; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G16023 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16023
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionupstream activation factor subunit UAF30-like
Genome locationctg2178:608311..617170
RNA-Seq ExpressionCucsat.G16023
SyntenyCucsat.G16023
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR014876 - DEK, C-terminal
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148436.1 upstream activation factor subunit UAF30 [Cucumis sativus]1.26e-22399.4Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
        IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED  DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Subjt:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

XP_008457882.1 PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo]3.51e-21495.78Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHEKAV+EGY HCEEV QEDGDENLKMETEDGDSEDGDND+ED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSS+K KKRGGGF+KLCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
        IPAKSSQKEK QKEKQPKEKPQKKRQKQGKEED  DSAREDKRQKKGKSGFLAPLPLS+ALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Subjt:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

XP_022928098.1 upstream activation factor subunit UAF30-like [Cucurbita moschata]3.51e-18384.32Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN
        DEKGKT S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKPQKEKQ-----PKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEK QKEKQ     PKEKPQKKRQKQGKEED  DSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKPQKEKQ-----PKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

XP_023512445.1 upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo]2.47e-18384.32Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN
        DEKGKT S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKPQKEKQ-----PKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEK QKEKQ     PKEKPQKKRQKQGKEED  DSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKPQKEKQ-----PKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

XP_038901460.1 upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]8.44e-19387.8Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVD+FLQTEHE+AV+EG   CEEV QE GDENLK E +DGDSEDGDND+ED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRG-----GGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        DEKGK  S K+ K G     GGF+KLCSLSPQLQEFIGAPEMARTEVVKQLWNHIR  NLQDPSNRRNILCD+ LKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKTSSEKVKKRG-----GGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD
        ESNDVIPA SSQKEK QKEKQPKEKPQKKRQKQGKEED  DSARE+KRQKKGKSGFLAPL LS+ALV FLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD
Subjt:  ESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD

Query:  KRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        KRRIICDERLKELFDVDSF+GFTVSKLLATHFIK K
Subjt:  KRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

TrEMBL top hitse value%identityAlignment
A0A0A0LJW7 Uncharacterized protein6.10e-22499.4Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
        IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED  DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Subjt:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

A0A1S3C766 upstream activation factor subunit UAF30-like1.70e-21495.78Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHEKAV+EGY HCEEV QEDGDENLKMETEDGDSEDGDND+ED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSS+K KKRGGGF+KLCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
        IPAKSSQKEK QKEKQPKEKPQKKRQKQGKEED  DSAREDKRQKKGKSGFLAPLPLS+ALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Subjt:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

A0A5D3CU37 Upstream activation factor subunit UAF30-like7.31e-18095.19Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHEKAV+EGY HCEEV QEDGDENLKMETEDGDSEDGDND+ED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSS+K KKRGGGF+KLCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQ
        IPAKSSQKEK QKEKQPKEKPQKKRQKQGKEED  DSAREDKRQKKGKSGFLAPLPLS+ALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQ
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQ

A0A6J1EMX5 upstream activation factor subunit UAF30-like1.70e-18384.32Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN
        DEKGKT S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKPQKEKQ-----PKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEK QKEKQ     PKEKPQKKRQKQGKEED  DSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKPQKEKQ-----PKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

A0A6J1I6I7 upstream activation factor subunit spp27-like2.66e-18083.43Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND  D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN
         EKGK  S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEK Q     KEKQPKEK QKKRQKQGKEED  DSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE++L RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEED--DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        SDKRR+ICDE+LKELFDVDSF+GFTVSKLLATHF+K K
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp273.6e-1128.51Show/hide
Query:  LRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDG--DSEDGDNDNEDDEKGKTSS
        ++  L   D  T +   VR+ LEE   +DLS  K  +   +          + +E         +  G    +  TE+G   ++      ED E+G    
Subjt:  LRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDG--DSEDGDNDNEDDEKGKTSS

Query:  EKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQK
                   K   LSP+L EF+G  +++R + VK+LW +I+ ++LQDP+++R ILCD+ LK++F V++++MF MNK L+  +  +  +D +P    + 
Subjt:  EKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQK

Query:  EKP--------QKEKQPKEKP
        E+P        Q+EK+  E P
Subjt:  EKP--------QKEKQPKEKP

Q05024 Protein TRI19.5e-1229.8Show/hide
Query:  VRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEG---YAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--------GG
        VR+ L+  + ++L  ++  I E     L  E    +QE         ++   D + +L+++ E    E+    +    KGK+ S+  +K+          
Subjt:  VRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEG---YAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--------GG

Query:  GFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKE
           +   LS  LQ+F+G+ E+ RT+VVK +W +I+E++LQ+P +RR ILCDE ++ +FG   + MF MNK L+KH++    ++++  +  QK+ P+KE
Subjt:  GFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKE

Q08747 Upstream activation factor subunit UAF301.1e-1233.66Show/hide
Query:  LRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSE--DGDNDNEDDEKGKTSSEKVK
        L + DL T TT  VR  L+E + ID+  +   I + +   L    E+   E     E++ +E+    +++  E   S+   G+  N+ + KG T  EK K
Subjt:  LRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSE--DGDNDNEDDEKGKTSSEKVK

Query:  ---KRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIW-PLESNDVIP--AKSS
            +    T+  +LS  L   +G  E+ RTEVV++LW +I+ +NLQ+P+N++ ILCDE L+ + G  S NMF+M+K L+ H+  P + +D  P   +  
Subjt:  ---KRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIW-PLESNDVIP--AKSS

Query:  QKEKP
        +KEKP
Subjt:  QKEKP

Q9P7S3 SWI/SNF and RSC complexes subunit ssr38.6e-0544.64Show/hide
Query:  LSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVD
        LS A    LG  E   P  D+V  +W YIK + LQD  +KR I CD+ L++LF+ D
Subjt:  LSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVD

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein8.7e-6947.41Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDS+L+++LR+ LR+SDL TTT A VRR+LE  FG++L+DKK F+REQ+D FL+++   A+ E      +  QE+ D N       GD  D +    D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        D+K +    K KKRGGGF K+C LSPQL++F+G  ++ARTEVVK++W +IRE++LQDP+NRRNILCDE L +LF V +INMFQMNKAL+KHIW L   D 
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  I-------PAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDDSAREDKRQ-----------KKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDY
                    +  E+ +K+ + +E  +   ++  +EED S R+ KR+           KK   GF     LS  L AF GT +  L R++VVK +W Y
Subjt:  I-------PAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDDSAREDKRQ-----------KKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDY

Query:  IKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        IK+NNLQDPSDKR IICDE L+ LF V+S N F ++K LA H   + Q
Subjt:  IKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

AT2G35605.1 SWIB/MDM2 domain superfamily protein2.1e-1441.38Show/hide
Query:  TSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH
        ++  K  ++G G  K+  +S  L  FIG  E++RT  VK++W +I+ NNLQ+P N+R ILCDE LK +F G +++   +++K LS+H
Subjt:  TSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH

AT3G03590.1 SWIB/MDM2 domain superfamily protein6.7e-1341.23Show/hide
Query:  KQPKEKPQKKRQKQGKEEDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNG
        K+P  KP+ K + + K + DS     ++    +G     P+S  L  FLGTGE +  R+D +K +W YIK ++LQ+P+DKR I CDE LK +F+     G
Subjt:  KQPKEKPQKKRQKQGKEEDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNG

Query:  F-TVSKLLATHFIK
        F  +SKLL+ HF+K
Subjt:  F-TVSKLLATHFIK

AT3G19080.1 SWIB complex BAF60b domain-containing protein1.9e-6838.49Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSD +L++RLR+ L +SDLNT T A VRR+LE DFG+DL+DKK +IR+Q+D FL++       E      +V +    + +K E E GD ED D D   
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSE-KVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL----
         E+ K     K KKRGGG TK+  LSPQL++ +GA ++ RTEVVK++W +IRE +LQDP +RR I+CDE L +LF V +INMFQMNKAL+KHIWPL    
Subjt:  DEKGKTSSE-KVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL----

Query:  ---------------------------------ESNDVIPAKSSQKEKPQKEKQPKEKPQK---------------------------------------
                                         E ++    +S +K K +K  +  EKP++                                       
Subjt:  ---------------------------------ESNDVIPAKSSQKEKPQKEKQPKEKPQK---------------------------------------

Query:  ------------------------------------------------------KRQKQGKE----EDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGT
                                                              K  K GK+    + DS   +++ KK K   LAPLPLS+ALV FLG 
Subjt:  ------------------------------------------------------KRQKQGKE----EDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGT

Query:  GEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        GE++L R+DVVKR+W+YI  N+LQDPSDKRR+ICDE+LKELF+VDSF   +VSKLL  HFIK +Q
Subjt:  GEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

AT4G22360.1 SWIB complex BAF60b domain-containing protein6.9e-3435.65Show/hide
Query:  NEDDEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLES
        N+  ++   +  K K   GG  K+C +SP+L+  +G P + RTE+V+QLW +IR+NNLQDPSN+R I+CD+ L+ +F  +  +MF+MNK L+KHI PL+ 
Subjt:  NEDDEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLES

Query:  NDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI
            P+K S + K       K K + + + +  E   S           +   + + LS  L  F GTGE  +   ++++R+W+YIK NNL+DP +   I
Subjt:  NDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI

Query:  ICDERLKELFDVDSFNGFTVSKLLATHFIK
         CDE+L++L   +S +   ++++L  H  K
Subjt:  ICDERLKELFDVDSFNGFTVSKLLATHFIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCCCCAATCTCCCATCTGTTCTTCACGCAAAGCTTTTCTTTATTCAAAGCCAAAGCCACACGCCACCAACACTCTACCCTCACCTCCAATTCATACCCAATCTTCCTCG
TTTTTCCCTTCTTCCCTTTCAAATATTGGATTACCCAGCAATGGTTTCCGACTCGGAGCTCATCAGCCGGCTCCGAGACTTTCTTCGCAATTCCGACCTCAATACCACTA
CTACTGCTATCGTCCGCCGTAAGCTCGAGGAAGACTTCGGCATTGATTTGTCTGATAAGAAGCTGTTTATTAGGGAACAGGTCGACTTGTTCCTCCAGACTGAACATGAG
AAAGCCGTTCAAGAAGGTTATGCCCATTGCGAGGAAGTCCACCAGGAAGATGGAGATGAAAATTTGAAGATGGAAACGGAGGATGGAGATAGTGAAGACGGAGATAACGA
CAACGAAGACGACGAAAAGGGTAAAACTAGCTCTGAAAAGGTGAAGAAAAGAGGGGGTGGTTTTACTAAGTTATGTAGCCTTTCCCCACAACTGCAGGAATTTATTGGAG
CACCCGAAATGGCAAGGACTGAGGTTGTTAAACAACTATGGAACCACATTAGAGAGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAACCGTTA
AAAGCACTCTTTGGTGTCAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGATGTTATTCCAGCCAAATCTAGTCA
GAAAGAAAAGCCACAAAAGGAGAAGCAGCCAAAGGAGAAGCCACAAAAGAAGCGACAGAAGCAAGGGAAAGAAGAAGATGACTCTGCAAGAGAGGATAAGCGGCAAAAGA
AAGGGAAATCTGGTTTTCTTGCTCCTCTTCCACTTTCGAATGCTCTGGTGGCATTTCTTGGTACTGGAGAGGATGCATTGCCTCGCTCTGACGTAGTGAAAAGAATGTGG
GATTACATTAAGCAAAATAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATTTGTGACGAGAGGCTAAAAGAACTCTTTGATGTCGATTCCTTTAATGGGTTCACTGT
TTCGAAACTCCTGGCCACGCATTTTATAAAGATGAAACAGTAA
mRNA sequenceShow/hide mRNA sequence
TTCCCCAATCTCCCATCTGTTCTTCACGCAAAGCTTTTCTTTATTCAAAGCCAAAGCCACACGCCACCAACACTCTACCCTCACCTCCAATTCATACCCAATCTTCCTCG
TTTTTCCCTTCTTCCCTTTCAAATATTGGATTACCCAGCAATGGTTTCCGACTCGGAGCTCATCAGCCGGCTCCGAGACTTTCTTCGCAATTCCGACCTCAATACCACTA
CTACTGCTATCGTCCGCCGTAAGCTCGAGGAAGACTTCGGCATTGATTTGTCTGATAAGAAGCTGTTTATTAGGGAACAGGTCGACTTGTTCCTCCAGACTGAACATGAG
AAAGCCGTTCAAGAAGGTTATGCCCATTGCGAGGAAGTCCACCAGGAAGATGGAGATGAAAATTTGAAGATGGAAACGGAGGATGGAGATAGTGAAGACGGAGATAACGA
CAACGAAGACGACGAAAAGGGTAAAACTAGCTCTGAAAAGGTGAAGAAAAGAGGGGGTGGTTTTACTAAGTTATGTAGCCTTTCCCCACAACTGCAGGAATTTATTGGAG
CACCCGAAATGGCAAGGACTGAGGTTGTTAAACAACTATGGAACCACATTAGAGAGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAACCGTTA
AAAGCACTCTTTGGTGTCAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGATGTTATTCCAGCCAAATCTAGTCA
GAAAGAAAAGCCACAAAAGGAGAAGCAGCCAAAGGAGAAGCCACAAAAGAAGCGACAGAAGCAAGGGAAAGAAGAAGATGACTCTGCAAGAGAGGATAAGCGGCAAAAGA
AAGGGAAATCTGGTTTTCTTGCTCCTCTTCCACTTTCGAATGCTCTGGTGGCATTTCTTGGTACTGGAGAGGATGCATTGCCTCGCTCTGACGTAGTGAAAAGAATGTGG
GATTACATTAAGCAAAATAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATTTGTGACGAGAGGCTAAAAGAACTCTTTGATGTCGATTCCTTTAATGGGTTCACTGT
TTCGAAACTCCTGGCCACGCATTTTATAAAGATGAAACAGTAA
Protein sequenceShow/hide protein sequence
FPNLPSVLHAKLFFIQSQSHTPPTLYPHLQFIPNLPRFSLLPFQILDYPAMVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE
KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPL
KALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMW
DYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ