; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G16056 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16056
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibosome assembly factor mrt4
Genome locationctg2178:1169796..1172627
RNA-Seq ExpressionCucsat.G16056
SyntenyCucsat.G16056
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
InterPro domainsIPR001790 - Ribosomal protein L10P
IPR033867 - Ribosome assembly factor Mrt4
IPR040637 - 60S ribosomal protein L10P, insertion domain
IPR043141 - Ribosomal protein L10-like domain superfamily
IPR043164 - 50S ribosomal protein L10, insertion domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649395.1 mRNA turnover protein 4 homolog [Cucumis sativus]8.56e-15499.55Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVERLFNEYEDYDYARTGSAASEKVELKEGPL QFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELYIDGPENSDVESA
        SPGDFELYIDGPENSDVESA
Subjt:  SPGDFELYIDGPENSDVESA

XP_022157470.1 mRNA turnover protein 4 homolog [Momordica charantia]4.87e-14491.36Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTKKKGR+HKKSMV+LIRQAVENYNS++VFTVENMRNLKFKELREQLKSTSRLFFGANKVMQ+SLGR+ SDEIRPGLHK+SKLLHGNTGLCFTNLP
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVERLFNEYEDYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEGK+LSPESAGILRALG+R A FRLNLVCRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELYIDGPENSDVESA
        SPGDF+LYI+G +NSDVESA
Subjt:  SPGDFELYIDGPENSDVESA

XP_022933518.1 mRNA turnover protein 4 homolog [Cucurbita moschata]1.15e-14290.45Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTKKKGR+HKKSMV+LIRQAVENYNS++VFTVENMRNLKFKELREQLKS+SRLFFGANKVMQ+SLGR+ SDEI+PGL+KVSKLLHGNTGLCFTNLP
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVERLFNEY DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALG+R A FRLNLVCRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELYIDGPENSDVESA
        SPG+FELYIDGP+NSD+E+A
Subjt:  SPGDFELYIDGPENSDVESA

XP_023529350.1 mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo]4.67e-14290Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTKKKGR+HKKSMV+LIRQAVENYNS++VFTVENMRNLKFKELREQLKS+SRLFFGANKVMQ+SLGR+ S+EI+PGL+KVSKLLHGNTGLCFTNLP
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVERLFNEY DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALG+R A FRLNLVCRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELYIDGPENSDVESA
        SPG+FELYIDGP+NSD+E+A
Subjt:  SPGDFELYIDGPENSDVESA

XP_038902849.1 mRNA turnover protein 4 homolog [Benincasa hispida]1.25e-14694.09Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTKKKGR+HKKSMVELIRQAVENYNS+FVFTVENMRNLKFKELREQLKS+SRLFFGANKVMQ+SLGRS S+EIRPGLHKVSKLLHGNTGLCFTNLP
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVERLFNEY DYDYARTGSAA+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALG+R A FRL+LVCRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELYIDGPENSDVESA
        SPGDFELYIDGP+NSDVESA
Subjt:  SPGDFELYIDGPENSDVESA

TrEMBL top hitse value%identityAlignment
A0A0A0LM77 Ribosome assembly factor mrt43.02e-13595.65Show/hide
Query:  MVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFF---GANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYED
        MVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSR       +NKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYED
Subjt:  MVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFF---GANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYED

Query:  YDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRWSPGDFELYIDGPE
        YDYARTGSAASEKVELKEGPL QFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRWSPGDFELYIDGPE
Subjt:  YDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRWSPGDFELYIDGPE

Query:  NSDVESA
        NSDVESA
Subjt:  NSDVESA

A0A2P6PDT8 Ribosome assembly factor mrt42.05e-12277.27Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTK+KGR+HK+++V  I+QA E+YNSV+VF+ ENMRNLKFKE R+QLKSTSR F G+NKVMQI+LGRS+SDEI+ GLHKVS++LHGN GLCFTNLP
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVERLFNEYE+YD+ARTGS A+EKVEL+EGPLEQFSHEMEP LRK G+PVRLNKGVVELV+D+VVCEEGK LSPESA ILR LG +TA FRL+L+CRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELYIDGPENSDVESA
        SPG+FELY+ GP +S VES+
Subjt:  SPGDFELYIDGPENSDVESA

A0A6J1DT71 Ribosome assembly factor mrt42.36e-14491.36Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTKKKGR+HKKSMV+LIRQAVENYNS++VFTVENMRNLKFKELREQLKSTSRLFFGANKVMQ+SLGR+ SDEIRPGLHK+SKLLHGNTGLCFTNLP
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVERLFNEYEDYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEGK+LSPESAGILRALG+R A FRLNLVCRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELYIDGPENSDVESA
        SPGDF+LYI+G +NSDVESA
Subjt:  SPGDFELYIDGPENSDVESA

A0A6J1F4Z2 Ribosome assembly factor mrt45.55e-14390.45Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTKKKGR+HKKSMV+LIRQAVENYNS++VFTVENMRNLKFKELREQLKS+SRLFFGANKVMQ+SLGR+ SDEI+PGL+KVSKLLHGNTGLCFTNLP
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVERLFNEY DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALG+R A FRLNLVCRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELYIDGPENSDVESA
        SPG+FELYIDGP+NSD+E+A
Subjt:  SPGDFELYIDGPENSDVESA

A0A6J1I1E2 Ribosome assembly factor mrt49.20e-14290Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTKKKGR+HKKSMV+LIRQAVENYNS++VFTVENMRNLKFKELREQLKS+SRLFFGANKVMQ+SLGR+ SDEI+PGL+KVSKLLHGNTGLCFTNLP
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVERLFNEY DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALG+R A FRLNLVCRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELYIDGPENSDVESA
        SPG+FELYIDGP+ SD+E+A
Subjt:  SPGDFELYIDGPENSDVESA

SwissProt top hitse value%identityAlignment
A4FV84 mRNA turnover protein 4 homolog3.3e-5248.87Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        V+L+KT KKG + K++++E +R+ V+ Y  +F+F+V NMRN K K++R   K  SR+FFG NKVM ++LGRS SDE +  LH+VSK L G  GL FTN  
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEV+  F +Y + DYAR G+ A+  V L  GPLEQF H MEP LR+LGLP  L KGVV L+SD+ VC+EG  L+PE A +L+  G   A F++++   W
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  --SPGDFELYIDGPENSDVES
            G F+   D    S  ES
Subjt:  --SPGDFELYIDGPENSDVES

Q7S302 Ribosome assembly factor mrt42.3e-3234.98Show/hide
Query:  LSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKE
        L++  KK R+ K+ + E IR+ + NY   FVF+++NMRN   K++R++L +  R+FFG  K+   +LG +  D    GL K+SK L G+ GL FTN    
Subjt:  LSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKE

Query:  EVERLFNEYEDYDYARTGSAASEKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVVEL------VSDFVVCEEGKSLSPESAGILRA
        E++  F      D+AR GS A+  + +  GPL               SH +EP LR+LG+P R+ KG V L        D+V+C+EG++L      +L+ 
Subjt:  EVERLFNEYEDYDYARTGSAASEKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVVEL------VSDFVVCEEGKSLSPESAGILRA

Query:  LGLRTAIFRLNLVCRWSPGDFEL
          +  + FR+ L+  WS    E+
Subjt:  LGLRTAIFRLNLVCRWSPGDFEL

Q86HD3 Ribosome assembly factor mrt41.1e-3937.68Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        V ++K  K   + KK +V  I+  V+ Y  +++FT ENMRN K K +R +  STS+  FG NKV+ + LG+S+ DE++P LHK+++ L G  GL FTN P
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        K++V   F  Y + D+ R+G  + E + +KEGP+   +H ME  LR LGLP  L  GV+ +  ++ +CE G +++PE + +L+      + F+ ++   W
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFEL
        +  +F L
Subjt:  SPGDFEL

Q9D0I8 mRNA turnover protein 4 homolog8.2e-5148.42Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        V+L+KT KKG + K++++E +R+ V+ Y  +F+F+V NMRN K K++R   K  SR+FFG NKVM ++LGRS SDE +  LH+VSK L G  GL FTN  
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEV   F +Y + D+AR G+ A+  V L  GPL+QF H MEP LR+LGLP  L KGVV L+SD+ VC+EG  L+PE A IL+  G   A F++ +   W
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  --SPGDFELYIDGPENSDVES
            G F+   D    S  ES
Subjt:  --SPGDFELYIDGPENSDVES

Q9UKD2 mRNA turnover protein 4 homolog1.7e-5148.42Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        V+L+KT KKG + K++++E +R+ V+ Y  +F+F+V NMRN K K++R   K  SR+FFG NKVM ++LGRS SDE +  LH+VSK L G  GL FTN  
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEV   F +Y + DYAR G+ A+  V L  GPLEQF H MEP LR+LGLP  L +GVV L+SD+ VC+EG  L+PE A +L+  G   A F++ +   W
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  --SPGDFELYIDGPENSDVES
            G F+   D    S  ES
Subjt:  --SPGDFELYIDGPENSDVES

Arabidopsis top hitse value%identityAlignment
AT1G25260.1 Ribosomal protein L10 family protein6.0e-8169.23Show/hide
Query:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP
        VTLSKTKKKGR+HK+ +V  IR+AVE Y+SV+VF+ ENMRN+KFKE R+Q +   + F G+NKVMQ++LGRS  DE+R G++KVSKLL G+TGL  T++P
Subjt:  VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLP

Query:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW
        KEEVE LFN YED D++RTGS A E VELKEGPLEQF+HEMEP LRKL +PVRLNKG VELV+DFVVCEEGK LSP+SA ILR L ++ A F+LNL+CRW
Subjt:  KEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRW

Query:  SPGDFELY
        SP DFELY
Subjt:  SPGDFELY

AT3G09200.1 Ribosomal protein L10 family protein1.3e-1125.29Show/hide
Query:  QAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSA
        Q ++ Y  + V   +N+ + + + +R+ L+  S +  G N +M+ S+     +     +  +  LL GN GL FT    +EV     +Y+    AR G  
Subjt:  QAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSA

Query:  ASEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLR
        A   V ++ G     +  ++PS     + L +P ++NKG VE+++   + ++G  +    A +L  LG+R
Subjt:  ASEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLR

AT3G09200.2 Ribosomal protein L10 family protein3.7e-0630.19Show/hide
Query:  LLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGIL
        LL GN GL FT    +EV     +Y+    AR G  A   V ++ G     +  ++PS     + L +P ++NKG VE+++   + ++G  +    A +L
Subjt:  LLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGIL

Query:  RALGLR
          LG+R
Subjt:  RALGLR

AT3G11250.1 Ribosomal protein L10 family protein1.0e-1125.29Show/hide
Query:  QAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSA
        Q ++ Y  + V   +N+ + + + +R+ L+  S +  G N +M+ S+     +     +  +  LL GN GL FT    +EV     +Y+    AR G  
Subjt:  QAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSA

Query:  ASEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLR
        A   V ++ G     +  ++PS     + L +P ++NKG VE+++   + ++G  +    A +L  LG+R
Subjt:  ASEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCTTCTATCTAATTGTTCGTGGGATAAATGCAGTTACTTTATCAAAAACAAAGAAGAAAGGAAGGGACCACAAGAAATCAATGGTGGAATTGATCAGGCAGGCTGTGGA
AAATTACAACTCAGTTTTTGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTCAAGGAACTCAGGGAGCAGCTGAAGTCAACTAGCAGATTGTTTTTTGGAGCAAACA
AAGTTATGCAAATTTCTCTTGGGCGAAGTGATTCTGATGAGATTCGACCAGGCCTTCACAAGGTTTCTAAGCTTTTGCATGGAAATACTGGACTTTGCTTCACAAACCTA
CCAAAAGAAGAGGTTGAGAGGTTATTTAACGAGTATGAGGATTATGATTATGCAAGGACTGGAAGTGCAGCCTCAGAAAAGGTTGAGCTTAAGGAAGGTCCACTGGAGCA
GTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGATTACCTGTTCGTTTGAATAAGGGTGTGGTGGAGCTTGTATCAGACTTTGTTGTATGCGAGGAGGGCAAGT
CTCTATCACCAGAGTCAGCCGGAATACTGCGTGCACTGGGGCTAAGGACGGCAATTTTTCGGCTGAATTTGGTTTGCAGATGGAGTCCCGGTGACTTTGAACTTTACATT
GATGGACCAGAAAATTCTGATGTGGAATCTGCCTAA
mRNA sequenceShow/hide mRNA sequence
GTCTTCTATCTAATTGTTCGTGGGATAAATGCAGTTACTTTATCAAAAACAAAGAAGAAAGGAAGGGACCACAAGAAATCAATGGTGGAATTGATCAGGCAGGCTGTGGA
AAATTACAACTCAGTTTTTGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTCAAGGAACTCAGGGAGCAGCTGAAGTCAACTAGCAGATTGTTTTTTGGAGCAAACA
AAGTTATGCAAATTTCTCTTGGGCGAAGTGATTCTGATGAGATTCGACCAGGCCTTCACAAGGTTTCTAAGCTTTTGCATGGAAATACTGGACTTTGCTTCACAAACCTA
CCAAAAGAAGAGGTTGAGAGGTTATTTAACGAGTATGAGGATTATGATTATGCAAGGACTGGAAGTGCAGCCTCAGAAAAGGTTGAGCTTAAGGAAGGTCCACTGGAGCA
GTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGATTACCTGTTCGTTTGAATAAGGGTGTGGTGGAGCTTGTATCAGACTTTGTTGTATGCGAGGAGGGCAAGT
CTCTATCACCAGAGTCAGCCGGAATACTGCGTGCACTGGGGCTAAGGACGGCAATTTTTCGGCTGAATTTGGTTTGCAGATGGAGTCCCGGTGACTTTGAACTTTACATT
GATGGACCAGAAAATTCTGATGTGGAATCTGCCTAA
Protein sequenceShow/hide protein sequence
VFYLIVRGINAVTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNL
PKEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRWSPGDFELYI
DGPENSDVESA