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Cucsat.G16081 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16081
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description60S ribosomal protein L38
Genome locationctg2185:260115..263903
RNA-Seq ExpressionCucsat.G16081
SyntenyCucsat.G16081
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022618 - ribonucleoprotein complex assembly (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646019.1 hypothetical protein Csa_015924 [Cucumis sativus]1.70e-5997.14Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSFRLLEGRQVEAIPSTRLNLIEMGLLEEKITKAVLQRPTLLETSSLLCQENNLKI
        MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSFRLLEGRQVEAIPSTRLNLIEMGLLEEKITKAVLQRPTLLETSSLLCQENNLKI
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSFRLLEGRQVEAIPSTRLNLIEMGLLEEKITKAVLQRPTLLETSSLLCQENNLKI

Query:  SMLRE
        S+  E
Subjt:  SMLRE

KAE9620435.1 putative ribosomal protein L38e [Lupinus albus]2.08e-1995.65Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
        MPKQIHEIK FLL ARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS

KAG2285043.1 hypothetical protein Bca52824_044647 [Brassica carinata]2.88e-1991.49Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSF
        MPKQIHEIK FLL ARRKDARSVKIKRSKD+VKFKVRCSKYLYTL F
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSF

PQP96040.1 putative 60S ribosomal protein L38 [Prunus yedoensis var. nudiflora]3.59e-1974.6Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS-FRLLEGRQVEAIPSTR
        MPKQIHEIK FLL ARRKDARSVKIKRSKD VKFKVRCSKY YTL  F   +  + EA+PS+R
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS-FRLLEGRQVEAIPSTR

XP_019413806.1 PREDICTED: 60S ribosomal protein L38-like [Lupinus angustifolius]2.08e-1995.65Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
        MPKQIHEIK FLL ARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS

TrEMBL top hitse value%identityAlignment
A0A0A0K2Z5 60S ribosomal protein L389.18e-32100Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSFRLLEGRQVEAIPSTR
        MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSFRLLEGRQVEAIPSTR
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSFRLLEGRQVEAIPSTR

A0A314XWM2 Putative 60S ribosomal protein L381.74e-1974.6Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS-FRLLEGRQVEAIPSTR
        MPKQIHEIK FLL ARRKDARSVKIKRSKD VKFKVRCSKY YTL  F   +  + EA+PS+R
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS-FRLLEGRQVEAIPSTR

A0A4P1R1U4 Uncharacterized protein1.01e-1995.65Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
        MPKQIHEIK FLL ARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS

A0A6A4QSI4 Putative ribosomal protein L38e2.88e-1993.48Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
        MPK+IHEIK FLL ARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS

A0A6A4R058 Putative ribosomal protein L38e1.01e-1995.65Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
        MPKQIHEIK FLL ARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLS

SwissProt top hitse value%identityAlignment
O22860 60S ribosomal protein L381.2e-1591.11Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
        MPKQIHEIK FLL ARRKDARSVKIKRSKD+VKFKVRCS+YLYTL
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL

P46291 60S ribosomal protein L389.9e-1586.67Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
        MPKQIHEIK FLL ARRKDAR+VKIK++KD+VKFKVRCSKYLYTL
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL

P63173 60S ribosomal protein L383.5e-1277.78Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
        MP++I EIK FLL ARRKDA+SVKIK++KD VKFKVRCS+YLYTL
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL

Q32PB9 60S ribosomal protein L383.5e-1277.78Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
        MP++I EIK FLL ARRKDA+SVKIK++KD VKFKVRCS+YLYTL
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL

Q95V84 60S ribosomal protein L386.4e-1484.44Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
        MPKQIHEIK FLL ARRKDA+SVKIK++KD VKFKVRCS+YLYTL
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL

Arabidopsis top hitse value%identityAlignment
AT2G43460.1 Ribosomal L38e protein family8.3e-1791.11Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
        MPKQIHEIK FLL ARRKDARSVKIKRSKD+VKFKVRCS+YLYTL
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL

AT3G59540.1 Ribosomal L38e protein family8.3e-1791.11Show/hide
Query:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
        MPKQIHEIK FLL ARRKDARSVKIKRSKD+VKFKVRCS+YLYTL
Subjt:  MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAACAAATTCATGAGATCAAAGGTTTCCTTCTCGCTGCTAGAAGGAAGGATGCTCGTTCTGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAA
GTTCGATGCTCCAAATATCTTTATACTTTGTCTTTTCGACTCTTAGAAGGCAGACAAGTTGAAGCAATCCCTTCCACCAGGTTGAATTTGATAGAGATGGGGTTG
TTAGAGGAAAAAATCACAAAAGCTGTGTTGCAGAGGCCTACATTGTTGGAGACTTCGAGCTTGCTATGTCAAGAGAACAATTTAAAAATCAGTATGTTAAGGGAA
CAATTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAACAAATTCATGAGATCAAAGGTTTCCTTCTCGCTGCTAGAAGGAAGGATGCTCGTTCTGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAA
GTTCGATGCTCCAAATATCTTTATACTTTGTCTTTTCGACTCTTAGAAGGCAGACAAGTTGAAGCAATCCCTTCCACCAGGTTGAATTTGATAGAGATGGGGTTG
TTAGAGGAAAAAATCACAAAAGCTGTGTTGCAGAGGCCTACATTGTTGGAGACTTCGAGCTTGCTATGTCAAGAGAACAATTTAAAAATCAGTATGTTAAGGGAA
CAATTTCCTTAA
Protein sequenceShow/hide protein sequence
MPKQIHEIKGFLLAARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSFRLLEGRQVEAIPSTRLNLIEMGLLEEKITKAVLQRPTLLETSSLLCQENNLKISMLRE
QFP