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Cucsat.G16152 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16152
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionDynein light chain
Genome locationctg2203:30743..33813
RNA-Seq ExpressionCucsat.G16152
SyntenyCucsat.G16152
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR019763 - Dynein light chain, type 1/2, conserved site
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150499.1 dynein light chain 1, cytoplasmic [Cucumis sativus]1.94e-72100Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

XP_008458417.1 PREDICTED: dynein light chain 1, cytoplasmic [Cucumis melo]5.34e-7096.33Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQG L+VKSVSEDRKPPAVT TGKKIVIKSADMFGDVQK+AIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

XP_022959519.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]1.21e-6693.58Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQG L+VKSVSEDRKP AV TTGKKIVIKSADMFGDVQK+AIDVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

XP_023006429.1 dynein light chain 1, cytoplasmic [Cucurbita maxima]1.41e-6591.74Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQG L+VKSVSEDRKP  + TTGKKIVIKSADMFGDVQK+AIDVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

XP_038906782.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]2.18e-6995.41Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQG L+VKSVSEDRKPPAV TTGKKIVIKSADMFGDVQK+AI+VAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

TrEMBL top hitse value%identityAlignment
A0A0A0KCI4 Dynein light chain9.40e-73100Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

A0A1S3C7T8 Dynein light chain2.59e-7096.33Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQG L+VKSVSEDRKPPAVT TGKKIVIKSADMFGDVQK+AIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

A0A6J1EQC6 Dynein light chain5.61e-6589.91Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQG  +VK+VSEDRKP AV TTGKKIVIKSADMFGDVQK+A+DVAI AFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

A0A6J1H8A5 Dynein light chain5.85e-6793.58Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQG L+VKSVSEDRKP AV TTGKKIVIKSADMFGDVQK+AIDVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

A0A6J1L253 Dynein light chain6.83e-6691.74Show/hide
Query:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
        MSNDAKRSIQG L+VKSVSEDRKP  + TTGKKIVIKSADMFGDVQK+AIDVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNH
Subjt:  MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNH

Query:  FVYFYLDQK
        FVYFYLDQK
Subjt:  FVYFYLDQK

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic9.0e-2670.13Show/hide
Query:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ
        +K VIK+ADM  D+Q+ AID A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFGSYVTHET HF+YFYL Q
Subjt:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ

Q3MHR3 Dynein light chain 2, cytoplasmic1.5e-2568.83Show/hide
Query:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ
        +K VIK+ADM  D+Q+ A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFGSYVTHET HF+YFYL Q
Subjt:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ

Q78P75 Dynein light chain 2, cytoplasmic1.5e-2568.83Show/hide
Query:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ
        +K VIK+ADM  D+Q+ A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFGSYVTHET HF+YFYL Q
Subjt:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ

Q96FJ2 Dynein light chain 2, cytoplasmic1.5e-2568.83Show/hide
Query:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ
        +K VIK+ADM  D+Q+ A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFGSYVTHET HF+YFYL Q
Subjt:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ

Q9D0M5 Dynein light chain 2, cytoplasmic1.5e-2568.83Show/hide
Query:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ
        +K VIK+ADM  D+Q+ A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFGSYVTHET HF+YFYL Q
Subjt:  KKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQ

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein2.2e-1139.74Show/hide
Query:  IKSADMFGDVQKKAIDVA---IAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKF
        ++++DM    Q +A  ++   + A    +  K +A  +KK+FD  +GP WHCIVG +FGSYVTH T  F+YF +D+ +
Subjt:  IKSADMFGDVQKKAIDVA---IAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKF

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.2e-0941.56Show/hide
Query:  KIVIKSADMFGDVQKKAIDVAIAAFEKHSVE--KDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLD
        K +++ +DM   +Q +A+  A  A +   V   K IA  IKKEFD+R+G  W C+VG NFG + TH    F+YF L+
Subjt:  KIVIKSADMFGDVQKKAIDVAIAAFEKHSVE--KDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLD

AT3G16120.1 Dynein light chain type 1 family protein4.6e-0939.47Show/hide
Query:  KIVIKSADMFGDVQKKAIDVAIAAFEKHSV--EKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYL
        K  ++  DM   +Q +A+ +A  + +   V     IA  IKKEFD+R+G  W C+VG NFG + TH    F+YF+L
Subjt:  KIVIKSADMFGDVQKKAIDVAIAAFEKHSV--EKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYL

AT4G15930.1 Dynein light chain type 1 family protein2.2e-3565.49Show/hide
Query:  KRSIQGTLLVKSVSEDRK---------PPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTH
        K+S+ G    +++ +DR+         PPA    GK+ VIKSADM  D+QK+AI++AI+AFEK+SVEKDIAE IKKEFDK+HG TWHCIVGRNFGSYVTH
Subjt:  KRSIQGTLLVKSVSEDRK---------PPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTH

Query:  ETNHFVYFYLDQK
        ETNHFVYFYLDQK
Subjt:  ETNHFVYFYLDQK

AT5G20110.1 Dynein light chain type 1 family protein2.0e-1248.72Show/hide
Query:  IKSADMFGDVQKKAIDVA---IAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKF
        I +ADM G +Q  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FGS+VTH T  F+YF +D+ +
Subjt:  IKSADMFGDVQKKAIDVA---IAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAACGATGCTAAGAGAAGCATTCAAGGGACTCTATTGGTGAAATCTGTGTCGGAAGATCGGAAACCACCGGCTGTCACCACTACTGGGAAGAAAATTGTTATCAA
GAGTGCCGATATGTTTGGTGATGTGCAGAAAAAGGCTATTGATGTCGCTATAGCTGCATTTGAAAAGCATAGTGTAGAGAAGGATATAGCAGAGTGTATTAAGAAAGAGT
TTGATAAGAGACATGGACCGACCTGGCACTGCATTGTTGGCCGTAATTTTGGTTCGTACGTGACACACGAGACAAACCACTTCGTTTACTTCTACTTGGATCAAAAGTTT
AATCAAATGATGATATCCTTTGTGGACAAGACAGCCTTCCCCATTTGCACCTCTCTTTTTTCTTGTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAACGATGCTAAGAGAAGCATTCAAGGGACTCTATTGGTGAAATCTGTGTCGGAAGATCGGAAACCACCGGCTGTCACCACTACTGGGAAGAAAATTGTTATCAA
GAGTGCCGATATGTTTGGTGATGTGCAGAAAAAGGCTATTGATGTCGCTATAGCTGCATTTGAAAAGCATAGTGTAGAGAAGGATATAGCAGAGTGTATTAAGAAAGAGT
TTGATAAGAGACATGGACCGACCTGGCACTGCATTGTTGGCCGTAATTTTGGTTCGTACGTGACACACGAGACAAACCACTTCGTTTACTTCTACTTGGATCAAAAGTTT
AATCAAATGATGATATCCTTTGTGGACAAGACAGCCTTCCCCATTTGCACCTCTCTTTTTTCTTGTACCTAA
Protein sequenceShow/hide protein sequence
MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKF
NQMMISFVDKTAFPICTSLFSCT