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Cucsat.G16246 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16246
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCDT1-like protein b
Genome locationctg2231:731986..734016
RNA-Seq ExpressionCucsat.G16246
SyntenyCucsat.G16246
Gene Ontology termsGO:0000076 - DNA replication checkpoint (biological process)
GO:0000278 - mitotic cell cycle (biological process)
GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process)
GO:0071163 - DNA replication preinitiation complex assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0070182 - DNA polymerase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151978.3 CDT1-like protein a, chloroplastic [Cucumis sativus]1.53e-1267.14Show/hide
Query:  NFASLFFNLPVTG--RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
        NF+S+   + V    RFSYSHLA LKFILP+AIMLKKVVVFD     +K DLHISFNFGVL ESKE +YM
Subjt:  NFASLFFNLPVTG--RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
XP_008447443.1 PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo]6.39e-1172.73Show/hide
Query:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
        RFSY+HLA LKFILP+AIMLKKVVVFD     +K DLHISFNF +L ESKE +YM
Subjt:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
XP_031737520.1 CDT1-like protein a, chloroplastic [Cucumis sativus]1.53e-1267.14Show/hide
Query:  NFASLFFNLPVTG--RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
        NF+S+   + V    RFSYSHLA LKFILP+AIMLKKVVVFD     +K DLHISFNFGVL ESKE +YM
Subjt:  NFASLFFNLPVTG--RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
XP_031739146.1 CDT1-like protein a, chloroplastic [Cucumis sativus]1.87e-0969.09Show/hide
Query:  RFSYSHLAPLKFILPKAIMLKKVVVFDV-----KLDLHISFNFGVL-VESKEGKY
        RFSYSHLA LKFILP+AI++KKV VFD      K +LHISFNFGVL V+SKE  Y
Subjt:  RFSYSHLAPLKFILPKAIMLKKVVVFDV-----KLDLHISFNFGVL-VESKEGKY
XP_038887484.1 CDT1-like protein b [Benincasa hispida]5.66e-1069.09Show/hide
Query:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
        RFSY HLA LKFILP+AI+LKKV+V+D     +K DLHISFNFGVL ES+E +YM
Subjt:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
TrEMBL top hitse value%identityAlignment
A0A0A0L7I7 CDT1 domain-containing protein1.22e-1165.71Show/hide
Query:  NFASLFFNLPVTG--RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
        NF+S+   + V    RFSYSHLA LKFILP+AIMLKKVVVF      +K DLHISFNFGVL ESKE +YM
Subjt:  NFASLFFNLPVTG--RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
A0A1S3BGW9 CDT1-like protein a, chloroplastic3.10e-1172.73Show/hide
Query:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
        RFSY+HLA LKFILP+AIMLKKVVVFD     +K DLHISFNF +L ESKE +YM
Subjt:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
A0A1S3CEP6 CDT1-like protein b1.77e-0967.27Show/hide
Query:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
        RFSY HLA  KFILP+AI+LKKVVV+D     +K DLHISFNF VL E+KE +YM
Subjt:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
A0A5A7T8X4 CDT1-like protein a3.10e-1172.73Show/hide
Query:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
        RFSY+HLA LKFILP+AIMLKKVVVFD     +K DLHISFNF +L ESKE +YM
Subjt:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
A0A5D3BZJ0 CDT1-like protein b1.77e-0967.27Show/hide
Query:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
        RFSY HLA  KFILP+AI+LKKVVV+D     +K DLHISFNF VL E+KE +YM
Subjt:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFNFGVLVESKEGKYM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31270.1 homolog of yeast CDT1 A3.6e-0450Show/hide
Query:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFN
        RF YSHLA +K ILP+AI +K+V++ D     +K DLH++ N
Subjt:  RFSYSHLAPLKFILPKAIMLKKVVVFD-----VKLDLHISFN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCAACGTCATGAACTCTCTCAAGACTCCAAATGTCGCCAGCCTTTTCCTACCTTTCATTTCTCCTATTCAAATTTTCTCAATAAAGTTCTTCCAATTTTCCCTCCAAAT
TCTTCAAATCAATCCACATAATTTTGCATCCCTTTTCTTCAATCTTCCTGTCACAGGGAGGTTTTCATACAGTCATTTGGCTCCATTGAAGTTTATTTTACCTAAAGCAA
TTATGCTTAAGAAAGTTGTGGTCTTTGATGTGAAACTAGATCTTCATATTTCTTTCAATTTTGGCGTCCTAGTAGAAAGTAAGGAGGGTAAGTATATGTAA
mRNA sequenceShow/hide mRNA sequence
CCCAACGTCATGAACTCTCTCAAGACTCCAAATGTCGCCAGCCTTTTCCTACCTTTCATTTCTCCTATTCAAATTTTCTCAATAAAGTTCTTCCAATTTTCCCTCCAAAT
TCTTCAAATCAATCCACATAATTTTGCATCCCTTTTCTTCAATCTTCCTGTCACAGGGAGGTTTTCATACAGTCATTTGGCTCCATTGAAGTTTATTTTACCTAAAGCAA
TTATGCTTAAGAAAGTTGTGGTCTTTGATGTGAAACTAGATCTTCATATTTCTTTCAATTTTGGCGTCCTAGTAGAAAGTAAGGAGGGTAAGTATATGTAA
Protein sequenceShow/hide protein sequence
PNVMNSLKTPNVASLFLPFISPIQIFSIKFFQFSLQILQINPHNFASLFFNLPVTGRFSYSHLAPLKFILPKAIMLKKVVVFDVKLDLHISFNFGVLVESKEGKYM