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Cucsat.G16280 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16280
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptioncarbon catabolite repressor protein 4 homolog 4
Genome locationctg2246:34645..49523
RNA-Seq ExpressionCucsat.G16280
SyntenyCucsat.G16280
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648327.1 hypothetical protein Csa_023093 [Cucumis sativus]8.98e-74100Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAYMTALVKHK
        MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAYMTALVKHK
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAYMTALVKHK

Query:  RSLRLGL
        RSLRLGL
Subjt:  RSLRLGL

XP_031741589.1 carbon catabolite repressor protein 4 homolog 4-like [Cucumis sativus]1.85e-6997.2Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDK---VHIVLYTYVCNILKMGPWAYMTALV
        MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDK   VHIVLYTYVCNILKMGPWAYMTALV
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDK---VHIVLYTYVCNILKMGPWAYMTALV

Query:  KHKRSLR
        KHKRSLR
Subjt:  KHKRSLR

XP_031745861.1 carbon catabolite repressor protein 4 homolog 4-like isoform X1 [Cucumis sativus]3.85e-8996.97Show/hide
Query:  LKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTP
        LKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIM AFKL QPFHHVVILANTHL WDPEWADVKLAQAKYLLSRLARFKSLVAE FECTP
Subjt:  LKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTP

Query:  SVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP
        SVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP
Subjt:  SVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP

XP_031745863.1 carbon catabolite repressor protein 4 homolog 4-like isoform X3 [Cucumis sativus]2.65e-8996.97Show/hide
Query:  LKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTP
        LKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIM AFKL QPFHHVVILANTHL WDPEWADVKLAQAKYLLSRLARFKSLVAE FECTP
Subjt:  LKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTP

Query:  SVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP
        SVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP
Subjt:  SVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP

XP_031745864.1 carbon catabolite repressor protein 4 homolog 4-like isoform X4 [Cucumis sativus]2.77e-7596.52Show/hide
Query:  LKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTP
        LKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIM AFKL QPFHHVVILANTHL WDPEWADVKLAQAKYLLSRLARFKSLVAE FECTP
Subjt:  LKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTP

Query:  SVLLAGDFNSTPGDK
        SVLLAGDFNSTPGDK
Subjt:  SVLLAGDFNSTPGDK

TrEMBL top hitse value%identityAlignment
A0A0A0L0V7 Endo/exonuclease/phosphatase domain-containing protein2.27e-6195.05Show/hide
Query:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV
        SS KTTVADRGDPNDPRVRLKRDCVGIM AFKLEQPFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPSVLLAGDFNSTPGDKV
Subjt:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV

Query:  H
        +
Subjt:  H

A0A1S3B9X8 carbon catabolite repressor protein 4 homolog 45.42e-6093.07Show/hide
Query:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV
        SS KTTVA RGDPNDPRVRLKRDCVGIM AFKLEQPFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPS+LLAGDFNSTPGDKV
Subjt:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV

Query:  H
        +
Subjt:  H

A0A5A7UEY1 Carbon catabolite repressor protein 4-like protein 42.91e-6093.07Show/hide
Query:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV
        SS KTTVA RGDPNDPRVRLKRDCVGIM AFKLEQPFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPS+LLAGDFNSTPGDKV
Subjt:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV

Query:  H
        +
Subjt:  H

A0A5D3BPZ3 Carbon catabolite repressor protein 4-like protein 42.91e-6093.07Show/hide
Query:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV
        SS KTTVA RGDPNDPRVRLKRDCVGIM AFKLEQPFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPS+LLAGDFNSTPGDKV
Subjt:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV

Query:  H
        +
Subjt:  H

A0A6J1IPN5 carbon catabolite repressor protein 4 homolog 4 isoform X21.12e-5888.12Show/hide
Query:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV
        SS KTT+ADRGDPNDPRVRLKRDCVGIM AF+L++PFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFK+LV+E FECTPS+LLAGDFNSTPGDKV
Subjt:  SSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV

Query:  H
        +
Subjt:  H

SwissProt top hitse value%identityAlignment
A8MS41 Carbon catabolite repressor protein 4 homolog 43.1e-3863.64Show/hide
Query:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT
        S+K    S   +K   S+  K +  D  D NDP VRLKRDCVGIM AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECT
Subjt:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT

Query:  PSVLLAGDFNSTPGDKVHIVL
        PS+LLAGDFNS PGD V+  L
Subjt:  PSVLLAGDFNSTPGDKVHIVL

B7XK66 Probable CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr41.0e-0430.85Show/hide
Query:  VVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAY--MTALVKHKRSLR
        ++I+AN HLYW+PE+ D+K+ Q    L  +   K    E ++    ++L GDFNS     V+  +           PW Y  +   V H  +LR
Subjt:  VVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAY--MTALVKHKRSLR

C4V7I7 Probable CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr41.5e-0837.04Show/hide
Query:  KRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH
        K+D + ++  F++ Q     +I+ N HLYWDPE+ D+K  QA  LL  L +    V++ ++  PS++L GDFNS     V+
Subjt:  KRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH

Q5RGT6 Protein angel homolog 29.1e-0635.78Show/hide
Query:  FPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHV----VILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVL
        F R +F+  S        RG P      + RD VG++   +   P  HV    + +ANTHL ++P   D+KLAQ   LL+ ++R   L  ++  C   VL
Subjt:  FPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHV----VILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVL

Query:  LAGDFNSTP
        L GDFNS P
Subjt:  LAGDFNSTP

Q8SU52 Probable CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr44.1e-0633.73Show/hide
Query:  LEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMG
        LE+P    V++ NTH++WDP++ D+KL Q   L+  + R  S           +LL GDFNS     V+  + T V +    G
Subjt:  LEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMG

Arabidopsis top hitse value%identityAlignment
AT1G31500.1 DNAse I-like superfamily protein2.2e-3963.64Show/hide
Query:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT
        S+K    S   +K   S+  K +  D  D NDP VRLKRDCVGIM AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECT
Subjt:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT

Query:  PSVLLAGDFNSTPGDKVHIVL
        PS+LLAGDFNS PGD V+  L
Subjt:  PSVLLAGDFNSTPGDKVHIVL

AT1G31500.2 DNAse I-like superfamily protein2.2e-3963.64Show/hide
Query:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT
        S+K    S   +K   S+  K +  D  D NDP VRLKRDCVGIM AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECT
Subjt:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT

Query:  PSVLLAGDFNSTPGDKVHIVL
        PS+LLAGDFNS PGD V+  L
Subjt:  PSVLLAGDFNSTPGDKVHIVL

AT1G31500.3 DNAse I-like superfamily protein3.7e-3964.96Show/hide
Query:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT
        S+K    S   +K   S+  K +  D  D NDP VRLKRDCVGIM AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECT
Subjt:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT

Query:  PSVLLAGDFNSTPGDKV
        PS+LLAGDFNS PGD V
Subjt:  PSVLLAGDFNSTPGDKV

AT1G31500.4 DNAse I-like superfamily protein2.2e-3963.64Show/hide
Query:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT
        S+K    S   +K   S+  K +  D  D NDP VRLKRDCVGIM AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECT
Subjt:  SLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECT

Query:  PSVLLAGDFNSTPGDKVHIVL
        PS+LLAGDFNS PGD V+  L
Subjt:  PSVLLAGDFNSTPGDKVHIVL

AT1G31530.1 DNAse I-like superfamily protein6.4e-1551.39Show/hide
Query:  IMDAFKLEQPFHHVVILANTHLY--WDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTP
        +M AFK+ +PF+HVVI+A++HL       W D+KLAQ K L++ LA FK +++    C+PSV+LAGDFNS P
Subjt:  IMDAFKLEQPFHHVVILANTHLY--WDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGAAGAACTCCCCCTTTTCCTTCCCCAGAAGAAAGTTCACTCACAGTTCATCATCAAAAACCACCGTAGCCGATCGTGGGGATCCTAACGATCCCCGAGTAAG
ATTAAAACGTGATTGCGTTGGGATTATGGATGCTTTCAAACTTGAGCAGCCTTTTCATCATGTTGTAATTCTAGCCAACACCCATCTTTATTGGGATCCAGAATGGGCTG
ATGTGAAGCTCGCTCAGGCTAAGTATCTTTTATCACGCCTAGCTCGATTCAAATCTTTAGTTGCTGAAAATTTTGAATGCACACCCTCAGTACTTTTGGCTGGCGATTTC
AATTCAACCCCAGGAGATAAGGTACACATTGTGTTATACACTTATGTATGTAATATACTAAAGATGGGACCGTGGGCATATATGACGGCTTTAGTGAAACACAAACGGAG
TCTCAGGTTGGGCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGAAGAACTCCCCCTTTTCCTTCCCCAGAAGAAAGTTCACTCACAGTTCATCATCAAAAACCACCGTAGCCGATCGTGGGGATCCTAACGATCCCCGAGTAAG
ATTAAAACGTGATTGCGTTGGGATTATGGATGCTTTCAAACTTGAGCAGCCTTTTCATCATGTTGTAATTCTAGCCAACACCCATCTTTATTGGGATCCAGAATGGGCTG
ATGTGAAGCTCGCTCAGGCTAAGTATCTTTTATCACGCCTAGCTCGATTCAAATCTTTAGTTGCTGAAAATTTTGAATGCACACCCTCAGTACTTTTGGCTGGCGATTTC
AATTCAACCCCAGGAGATAAGGTACACATTGTGTTATACACTTATGTATGTAATATACTAAAGATGGGACCGTGGGCATATATGACGGCTTTAGTGAAACACAAACGGAG
TCTCAGGTTGGGCCTATGA
Protein sequenceShow/hide protein sequence
MSLKNSPFSFPRRKFTHSSSSKTTVADRGDPNDPRVRLKRDCVGIMDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDF
NSTPGDKVHIVLYTYVCNILKMGPWAYMTALVKHKRSLRLGL