| GenBank top hits | e value | %identity | Alignment |
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| KAA0063818.1 RNA polymerase sigma factor sigF [Cucumis melo var. makuwa] | 0.0 | 94.42 | Show/hide |
Query: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
VYMF EQASPARYFSTSFLSQEQHHECRPQSQILKDDR+SQMTL+RRLIERSVPIDEGSR DHDHLIWELKHQAVEWP LLSSWP +QMEEYKISS EKE
Subjt: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
Query: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
SYNA GEMLVKDEPENVIALAKKALSASKQAALLVDE+ELVGTSLDYSSLDDSLSKEGRTVRSTRLQ+RRSKKRKVPKHVTTI E SNFRGKDSRRKTSE
Subjt: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
KFDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQF REPTLVEWAEALGITCQ LQSQLH F+TSREKLINANLRMVVHIAKQY
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
GRGLSLHDLLQ GSLGLMKSVEKFKPQAGCRF SYAYWWIRHSI KAIFQHSRTIRLPENVYALLGKVTEAKNY VRAGNYKPSKEELAA VGITVER D
Subjt: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
Query: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQ+TT+QEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| XP_016902883.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Cucumis melo] | 0.0 | 94.62 | Show/hide |
Query: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
VYMF EQASPARYFSTSFLSQEQHHECRPQSQILKDDR+SQMTL+RRLIERSVPIDEGSR DHDHLIWELKHQAVEWP LLSSWP +QMEEYKISS EKE
Subjt: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
Query: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
SYNA GEMLVKDEPENVIALAKKALSASKQAALLVDE+ELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTI E SNFRGKDSRRKTSE
Subjt: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
KFDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQF REPTLVEWAEALGITCQ LQSQLH F+TSREKLINANLRMVVHIAKQY
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
GRGLSLHDLLQ GSLGLMKSVEKFKPQAGCRF SYAYWWIRHSI KAIFQHSRTIRLPENVYALLGKVTEAKNY VRAGNYKPSKEELAA VGITVER D
Subjt: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
Query: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQ+TT+QEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| XP_016902885.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Cucumis melo] | 0.0 | 94.62 | Show/hide |
Query: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
VYMF EQASPARYFSTSFLSQEQHHECRPQSQILKDDR+SQMTL+RRLIERSVPIDEGSR DHDHLIWELKHQAVEWP LLSSWP +QMEEYKISS EKE
Subjt: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
Query: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
SYNA GEMLVKDEPENVIALAKKALSASKQAALLVDE+ELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTI E SNFRGKDSRRKTSE
Subjt: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
KFDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQF REPTLVEWAEALGITCQ LQSQLH F+TSREKLINANLRMVVHIAKQY
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
GRGLSLHDLLQ GSLGLMKSVEKFKPQAGCRF SYAYWWIRHSI KAIFQHSRTIRLPENVYALLGKVTEAKNY VRAGNYKPSKEELAA VGITVER D
Subjt: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
Query: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQ+TT+QEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| XP_031742499.1 RNA polymerase sigma factor sigF, chloroplastic [Cucumis sativus] | 0.0 | 100 | Show/hide |
Query: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEG
MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEG
Subjt: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEG
Query: SRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEG
SRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEG
Subjt: SRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEG
Query: RTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVE
RTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVE
Subjt: RTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVE
Query: WAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLP
WAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLP
Subjt: WAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLP
Query: ENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
ENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: ENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| XP_038882876.1 RNA polymerase sigma factor sigF, chloroplastic [Benincasa hispida] | 0.0 | 89.68 | Show/hide |
Query: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEG
MEAGLNLLSSSS FISRCHPRSFL PSCSS SSSSSSV MF EQA PARYFSTSFLSQEQHHECRPQSQILKDDR+SQ TL+RRLIERSV IDEG
Subjt: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEG
Query: SRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEG
+R DHDHLIWE KHQAVEWPGLLSSWP +QMEEYKISS+EK+SYNA GEMLVKDEPENVIALAKKALSASKQAA LVDE+ELVGT+LDY+S DDSLSKEG
Subjt: SRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEG
Query: RTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVE
RTVRSTRLQDRRSKKRKVPKHVTTI E SN +GKDSRRKT E FDPNDPLRLFLWGPETKKLLT +EESELIVQIQDLMILDNVKARLQSQF REPTLVE
Subjt: RTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVE
Query: WAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLP
WAEALG+TCQ LQSQL F+ SREKLINANLRMVVHIAKQYQGRGLSL DLLQ GSLGLMKSVEKFKPQAGCRF +YAYWWIR SI KAIF+HSRTIRLP
Subjt: WAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLP
Query: ENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
ENVY LLGKVTEAKNYFVRAGNYKPSKEELAARVGITVER DKL+FMSRIPRSLQQPVW DQ+TTFQEITADSE+DTPDVSVERELMRRHIRNLLSILSP
Subjt: ENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRALYKLKRC NSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0KEQ6 RNA polymerase sigma factor | 0.0 | 100 | Show/hide |
Query: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEG
MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEG
Subjt: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEG
Query: SRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEG
SRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEG
Subjt: SRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEG
Query: RTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVE
RTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVE
Subjt: RTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVE
Query: WAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLP
WAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLP
Subjt: WAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLP
Query: ENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
ENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: ENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| A0A1S4E3S8 RNA polymerase sigma factor sigF, chloroplastic isoform X1 | 0.0 | 94.62 | Show/hide |
Query: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
VYMF EQASPARYFSTSFLSQEQHHECRPQSQILKDDR+SQMTL+RRLIERSVPIDEGSR DHDHLIWELKHQAVEWP LLSSWP +QMEEYKISS EKE
Subjt: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
Query: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
SYNA GEMLVKDEPENVIALAKKALSASKQAALLVDE+ELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTI E SNFRGKDSRRKTSE
Subjt: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
KFDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQF REPTLVEWAEALGITCQ LQSQLH F+TSREKLINANLRMVVHIAKQY
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
GRGLSLHDLLQ GSLGLMKSVEKFKPQAGCRF SYAYWWIRHSI KAIFQHSRTIRLPENVYALLGKVTEAKNY VRAGNYKPSKEELAA VGITVER D
Subjt: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
Query: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQ+TT+QEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| A0A1S4E4I4 RNA polymerase sigma factor sigF, chloroplastic isoform X2 | 0.0 | 94.62 | Show/hide |
Query: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
VYMF EQASPARYFSTSFLSQEQHHECRPQSQILKDDR+SQMTL+RRLIERSVPIDEGSR DHDHLIWELKHQAVEWP LLSSWP +QMEEYKISS EKE
Subjt: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
Query: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
SYNA GEMLVKDEPENVIALAKKALSASKQAALLVDE+ELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTI E SNFRGKDSRRKTSE
Subjt: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
KFDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQF REPTLVEWAEALGITCQ LQSQLH F+TSREKLINANLRMVVHIAKQY
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
GRGLSLHDLLQ GSLGLMKSVEKFKPQAGCRF SYAYWWIRHSI KAIFQHSRTIRLPENVYALLGKVTEAKNY VRAGNYKPSKEELAA VGITVER D
Subjt: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
Query: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQ+TT+QEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| A0A5A7V893 RNA polymerase sigma factor sigF | 0.0 | 94.42 | Show/hide |
Query: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
VYMF EQASPARYFSTSFLSQEQHHECRPQSQILKDDR+SQMTL+RRLIERSVPIDEGSR DHDHLIWELKHQAVEWP LLSSWP +QMEEYKISS EKE
Subjt: VYMFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKE
Query: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
SYNA GEMLVKDEPENVIALAKKALSASKQAALLVDE+ELVGTSLDYSSLDDSLSKEGRTVRSTRLQ+RRSKKRKVPKHVTTI E SNFRGKDSRRKTSE
Subjt: SYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
KFDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQF REPTLVEWAEALGITCQ LQSQLH F+TSREKLINANLRMVVHIAKQY
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
GRGLSLHDLLQ GSLGLMKSVEKFKPQAGCRF SYAYWWIRHSI KAIFQHSRTIRLPENVYALLGKVTEAKNY VRAGNYKPSKEELAA VGITVER D
Subjt: GRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFD
Query: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQ+TT+QEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| A0A5D3CAF4 RNA polymerase sigma factor | 0.0 | 94.4 | Show/hide |
Query: MFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESY
MF EQASPARYFSTSFLSQEQHHECRPQSQILKDDR+SQMTL+RRLIERSVPIDEGSR DHDHLIWELKHQAVEWP LLSSWP +QMEEYKISS EKESY
Subjt: MFPEQASPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERRLIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESY
Query: NAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKF
NA GEMLVKDEPENVIALAKKALSASKQAALLVDE+ELVGTSLDYSSLDDSLSKEGRTVRSTRLQ+RRSKKRKVPKHVTTI E SNFRGKDSRRKTSEKF
Subjt: NAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKF
Query: DPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGR
DPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQF REPTLVEWAEALGITCQ LQSQLH F+TSREKLINANLRMVVHIAKQY GR
Subjt: DPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGR
Query: GLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKL
GLSLHDLLQ GSLGLMKSVEKFKPQAGCRF SYAYWWIRHSI KAIFQHSRTIRLPENVYALLGKVTEAKNY VRAGNYKPSKEELAA VGITVER DKL
Subjt: GLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKL
Query: MFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYK
MFMSRIPRSLQQPVWADQ+TT+QEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRALYK
Subjt: MFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYK
Query: LKRCCNSQGLGAYADLLT
LKRCCNSQGLGAYADLLT
Subjt: LKRCCNSQGLGAYADLLT
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 6.0e-63 | 34.61 | Show/hide |
Query: EKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRK-VPKHVTTIDEISNFRGKDSRR
EKE G + V D N I K SAS + ++ +L + L + VRSTR +R++++ K + K + I + +R
Subjt: EKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRK-VPKHVTTIDEISNFRGKDSRR
Query: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIA
+++ D NDPLR + KLLT +EE EL IQDL+ L+ ++ L + R+PT +WA A G+ + L+ ++H ++K+I +N+R+V+ IA
Subjt: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIA
Query: KQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITV
K YQG G++L DL+Q G GL++ EKF G +F +YA+WWI+ ++ K++ SR IRLP ++ +V EA+ P EE+A G+++
Subjt: KQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITV
Query: ERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLE
+R ++ + PRSL Q + +Q E+ AD E T + + +E MR+ + +L L +E+++IR RFG+EDGR KTL EIG M G+S+ERVRQ+E
Subjt: ERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLE
Query: NRALYKLKRCCNSQGLGAY
+ A KLK + L Y
Subjt: NRALYKLKRCCNSQGLGAY
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| P26683 RNA polymerase sigma factor SigA | 1.6e-63 | 38.65 | Show/hide |
Query: TTIDEISNFRGKDSRRKT--SEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQ
T D+ + + SRR+T +K D +RL+L +LL A EE EL +I DL+ L+ V+ RL + +R+P EWAEA+ + + +LH+ +
Subjt: TTIDEISNFRGKDSRRKT--SEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQ
Query: TSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRA
+++K++ +NLR+VV IAK+Y RGLS DL+Q GSLGL+++ EKF + G +F +YA WWIR +IT+AI SRTIRLP ++Y + ++ + +
Subjt: TSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRA
Query: GNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTL
KP++EE+A R+ +T+E+ + +++P SL+ P+ ++++ + +S+ +TP+ V + L+R + +L LSP+ER ++RLR+G++DGR KTL
Subjt: GNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTL
Query: LEIGNMFGLSKERVRQLENRALYKLK
EIG +F +++ER+RQ+E +AL KL+
Subjt: LEIGNMFGLSKERVRQLENRALYKLK
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| P38023 RNA polymerase sigma factor SigA1 | 7.3e-61 | 39.75 | Show/hide |
Query: DEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREK
DE + + K RKT + D +RL+L +LL A EE EL QI DL+ L+ ++ L Q DR P+ EWA A+ + +L + +++K
Subjt: DEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREK
Query: LINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKP
++ +NLR+VV IAK+Y RGLS DL+Q GSLGL+++ EKF + G +F +YA WWIR +IT+AI SRTIRLP ++Y + ++ + + KP
Subjt: LINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKP
Query: SKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQE-ITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIG
++EE+A R+ +T+E+ + +++P SL+ P+ ++++ + I AD E TP+ V + L+R + +LS LSP+ER ++RLR+G++DGR KTL EIG
Subjt: SKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQE-ITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIG
Query: NMFGLSKERVRQLENRALYKLK
+F +++ER+RQ+E +AL KL+
Subjt: NMFGLSKERVRQLENRALYKLK
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| P74565 RNA polymerase sigma factor SigA | 5.1e-54 | 34.23 | Show/hide |
Query: EISNFRGKDSR----RKTSEKFDP--NDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAE---ALGITCQHL-----
E++ GK+ + RK + K P D +R++L +LL A+EE EL QI DL+ L+ ++ L Q +R+P+ +EW + L Q L
Subjt: EISNFRGKDSR----RKTSEKFDP--NDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAE---ALGITCQHL-----
Query: ------------------------------------QSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGS
+ +L + + +++K++ +NLR+VV IAK+Y RGLS DL+Q GSLGL+++ EKF + G +F +
Subjt: ------------------------------------QSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGS
Query: YAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQE-ITADSEV
YA WWIR +IT+AI SRTIRLP ++Y + ++ + + KP++EE+A ++ +T+E+ + +++P SL+ P+ ++++ + I AD E
Subjt: YAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQE-ITADSEV
Query: DTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLK
TP+ V + L+R + N+L LSP+ER ++RLR+G++DGR KTL EIG +F +++ER+RQ+E +AL KL+
Subjt: DTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLK
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 6.3e-145 | 53.21 | Show/hide |
Query: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQA-----------SPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERR
MEA NL+SSS F ++ H + SS SS SSV M +Q S +R+F S LSQE E RP S L+DDR+SQ+TLERR
Subjt: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQA-----------SPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERR
Query: LIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETEL-----VG
+ V SR+D + +L H W L+S P+ E A L E +V+ALA+KALSASKQAALLVD+TE +
Subjt: LIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETEL-----VG
Query: TSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNV
SL SS SL ++G VRS R +RR+K R+ PK DE + +++K + D +D L+LFLWGPETK+LLTA+EE+ELI IQ L+ L+ V
Subjt: TSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNV
Query: KARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRH
K +L+SQ EPT+ EWAEA+GI+ L+S +H ++SREKLI ANLR+VVHIAKQYQ RGL+ DLLQ GS+GLMKSVEKFKPQ+GCRF +YAYWWIR
Subjt: KARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRH
Query: SITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVER
SI K+IFQ+SRTIRLPENVY LLGKV+EA+ V+ GNY+PSKEELA VG++ E+ DKL++ +R P S+QQP+W+DQ+TTFQEIT DS ++TP +SV +
Subjt: SITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVER
Query: ELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
+LMR H+RNLL++LSPKERRII+LRFGI+ G++++L EIG ++GLSKERVRQLE+RALY+LK+ NS GL AYADLL
Subjt: ELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 4.3e-64 | 34.61 | Show/hide |
Query: EKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRK-VPKHVTTIDEISNFRGKDSRR
EKE G + V D N I K SAS + ++ +L + L + VRSTR +R++++ K + K + I + +R
Subjt: EKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRK-VPKHVTTIDEISNFRGKDSRR
Query: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIA
+++ D NDPLR + KLLT +EE EL IQDL+ L+ ++ L + R+PT +WA A G+ + L+ ++H ++K+I +N+R+V+ IA
Subjt: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIA
Query: KQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITV
K YQG G++L DL+Q G GL++ EKF G +F +YA+WWI+ ++ K++ SR IRLP ++ +V EA+ P EE+A G+++
Subjt: KQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITV
Query: ERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLE
+R ++ + PRSL Q + +Q E+ AD E T + + +E MR+ + +L L +E+++IR RFG+EDGR KTL EIG M G+S+ERVRQ+E
Subjt: ERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLE
Query: NRALYKLKRCCNSQGLGAY
+ A KLK + L Y
Subjt: NRALYKLKRCCNSQGLGAY
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| AT1G64860.1 sigma factor A | 5.8e-29 | 27.06 | Show/hide |
Query: IEKESYNAAGEMLVKDEPENVIALAKKALSASKQAAL-LVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSR
+E+E Y+ + L+ E ++ L K L S + +E G ++ G + R R+ +KK+ HV + ++S+ GK
Subjt: IEKESYNAAGEMLVKDEPENVIALAKKALSASKQAAL-LVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSR
Query: RKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHI
+R ++ G ++ +L+ E L +I+ + LD+ K+RL+ + EP+ + A +L I+ LQ+ L +REKL +N+R+V+ I
Subjt: RKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHI
Query: AKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGIT
A++Y G + DL+Q G +GL++ +EKF G R +Y YWWIR +++A+ +SRT+RLP +++ LG + AK G PS + +A + ++
Subjt: AKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGIT
Query: VERFDKLMFMSRIPRSLQQPVWADQE----TTFQEITADSEVD-TPDVSVERELMRRHIRNLLS-ILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSK
++ SL + + T AD+ ++ P + ++ + L+S L +E+ IIRL +G+ D T +I GLS+
Subjt: VERFDKLMFMSRIPRSLQQPVWADQE----TTFQEITADSEVD-TPDVSVERELMRRHIRNLLS-ILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSK
Query: ERVRQLENRALYKLKRCCNSQGLGA
ERVRQ+ AL KLK + + A
Subjt: ERVRQLENRALYKLKRCCNSQGLGA
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| AT2G36990.1 RNApolymerase sigma-subunit F | 4.5e-146 | 53.21 | Show/hide |
Query: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQA-----------SPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERR
MEA NL+SSS F ++ H + SS SS SSV M +Q S +R+F S LSQE E RP S L+DDR+SQ+TLERR
Subjt: MEAGLNLLSSSSPFISRCHPRSFLAPSCSSAASPSSSSSSSSVYMFPEQA-----------SPARYFSTSFLSQEQHHECRPQSQILKDDRSSQMTLERR
Query: LIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETEL-----VG
+ V SR+D + +L H W L+S P+ E A L E +V+ALA+KALSASKQAALLVD+TE +
Subjt: LIERSVPIDEGSRDDHDHLIWELKHQAVEWPGLLSSWPPVQMEEYKISSIEKESYNAAGEMLVKDEPENVIALAKKALSASKQAALLVDETEL-----VG
Query: TSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNV
SL SS SL ++G VRS R +RR+K R+ PK DE + +++K + D +D L+LFLWGPETK+LLTA+EE+ELI IQ L+ L+ V
Subjt: TSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNV
Query: KARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRH
K +L+SQ EPT+ EWAEA+GI+ L+S +H ++SREKLI ANLR+VVHIAKQYQ RGL+ DLLQ GS+GLMKSVEKFKPQ+GCRF +YAYWWIR
Subjt: KARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRH
Query: SITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVER
SI K+IFQ+SRTIRLPENVY LLGKV+EA+ V+ GNY+PSKEELA VG++ E+ DKL++ +R P S+QQP+W+DQ+TTFQEIT DS ++TP +SV +
Subjt: SITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVER
Query: ELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
+LMR H+RNLL++LSPKERRII+LRFGI+ G++++L EIG ++GLSKERVRQLE+RALY+LK+ NS GL AYADLL
Subjt: ELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
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| AT3G53920.1 RNApolymerase sigma-subunit C | 2.2e-36 | 25.51 | Show/hide |
Query: SKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTI---DEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQ
S + L D TELV T+ + S K + R + + + +P + T ++ R RK E+ N
Subjt: SKQAALLVDETELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTI---DEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQ
Query: EESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKF
E+E+ ++ + ++ ++ +L+ + + +L WA A G+ + L LH R++L+ + +V+ +A+ Y+G G++ DL+Q G +G+++ E+F
Subjt: EESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKF
Query: KPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYK-PSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETT
G +F +Y +WIR S++ + +H+R + +P ++ + + +A+ + K + EE+A G +V++ ++ S+ + V T
Subjt: KPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYK-PSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETT
Query: FQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
F E T D+ +++P+ +V R+ RR I +LL L P+E++++ LR+G++D R K+L EIG + +SKE +R++E RA+ KL+ N++ L Y
Subjt: FQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
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| AT5G13730.1 sigma factor 4 | 3.3e-40 | 33.77 | Show/hide |
Query: GPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVG
G L+ EE +L + +++ L+N+ ++ + E V A G + L + +REK+ R+VV IA YQG+GL+L DL+Q G
Subjt: GPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVG
Query: SLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQ
S+GL++ E+F P G + +Y YWWI+ +I +AI SR ++LP +++ L KV EA N R +PS EE+A + + V + SR P SL
Subjt: SLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQ
Query: QPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLG
+ + T QEI + P+ V+RE M+ I LL L+ +E R++ L FG+ + EIG LS+ERVRQ+ AL KL+ N L
Subjt: QPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLG
Query: AY
Y
Subjt: AY
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