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Cucsat.G16327 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16327
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationctg2246:715771..718229
RNA-Seq ExpressionCucsat.G16327
SyntenyCucsat.G16327
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACX85638.1 putative transposase [Cucumis melo]1.45e-5384.48Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFTMLDGAI+CQKTFERLEEHDPSYLPKDDI   EDWD  K+FVK LKTFSEVTMKFS SM VTSNIFFHELCLIQEII EYS +E ALLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN--WDI
         MTLSMQTKFN  W I
Subjt:  LMTLSMQTKFN--WDI

ADN33674.1 transposase [Cucumis melo subsp. melo]2.39e-5684.48Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFTMLDGAI+CQKTFERLEEHDPSYLPKDDI   EDWD  K+FVK LKTFSEVTMKFS SM VTSNIFFHELCLIQEII EYS +E ALLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN--WDI
         MTLSMQTKFN  W I
Subjt:  LMTLSMQTKFN--WDI

XP_016899471.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo]7.31e-5281.08Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFT+LDGAI+CQKTFERL+EHDPSYLP DDI  VEDWD+ K+FVK LKTFS VTMKFS SM+VT NIFF+ELCLIQEII EYS +E ALLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN
         MTL+MQTKFN
Subjt:  LMTLSMQTKFN

XP_016899473.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Cucumis melo]2.75e-5281.08Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFT+LDGAI+CQKTFERL+EHDPSYLP DDI  VEDWD+ K+FVK LKTFS VTMKFS SM+VT NIFF+ELCLIQEII EYS +E ALLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN
         MTL+MQTKFN
Subjt:  LMTLSMQTKFN

XP_022155174.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia]3.44e-3964.66Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFTMLDGAI+ ++TFERLE+HD +Y+ + D    EDWD  ++FV  LK FS+VT+KFS SM VTSNIFFHE+CL+QE I EYSL++  LLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN--WDI
         M L MQTKFN  W +
Subjt:  LMTLSMQTKFN--WDI

TrEMBL top hitse value%identityAlignment
A0A1S4DU07 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X13.54e-5281.08Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFT+LDGAI+CQKTFERL+EHDPSYLP DDI  VEDWD+ K+FVK LKTFS VTMKFS SM+VT NIFF+ELCLIQEII EYS +E ALLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN
         MTL+MQTKFN
Subjt:  LMTLSMQTKFN

A0A1S4DU44 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X21.33e-5281.08Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFT+LDGAI+CQKTFERL+EHDPSYLP DDI  VEDWD+ K+FVK LKTFS VTMKFS SM+VT NIFF+ELCLIQEII EYS +E ALLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN
         MTL+MQTKFN
Subjt:  LMTLSMQTKFN

A0A6J1DPH4 zinc finger BED domain-containing protein RICESLEEPER 2-like1.66e-3964.66Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFTMLDGAI+ ++TFERLE+HD +Y+ + D    EDWD  ++FV  LK FS+VT+KFS SM VTSNIFFHE+CL+QE I EYSL++  LLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN--WDI
         M L MQTKFN  W +
Subjt:  LMTLSMQTKFN--WDI

D0UIX2 Putative transposase7.03e-5484.48Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFTMLDGAI+CQKTFERLEEHDPSYLPKDDI   EDWD  K+FVK LKTFSEVTMKFS SM VTSNIFFHELCLIQEII EYS +E ALLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN--WDI
         MTLSMQTKFN  W I
Subjt:  LMTLSMQTKFN--WDI

E5GB32 Transposase1.16e-5684.48Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        MDVPTRWNSTFTMLDGAI+CQKTFERLEEHDPSYLPKDDI   EDWD  K+FVK LKTFSEVTMKFS SM VTSNIFFHELCLIQEII EYS +E ALLS
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN--WDI
         MTLSMQTKFN  W I
Subjt:  LMTLSMQTKFN--WDI

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 19.8e-0527.93Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        +DV T+WN+T+ ML  A++ ++ F  LE  D +Y   ++    EDW   +     LK   +       +   TSN+FFHE   +Q  +   +  E  + S
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN
         +   M  +F+
Subjt:  LMTLSMQTKFN

P03010 Putative AC9 transposase3.7e-0428.79Show/hide
Query:  DVPTRWNSTFTMLDGAIECQKTFERLEEHDP----------SYLPKDDISIVEDWDTTKMFV-------------KSLKTFSEVTMKFSVSMFVTSNIFF
        DV TRWNST+ ML  A+  +    RL+  DP           +  K  I+ +     T  FV             K LK F ++T   S + + T+N+F+
Subjt:  DVPTRWNSTFTMLDGAIECQKTFERLEEHDP----------SYLPKDDISIVEDWDTTKMFV-------------KSLKTFSEVTMKFSVSMFVTSNIFF

Query:  HELCLIQEIILEYSLHEYALLSLMTLSMQTKF
           C I+++I ++  HE  ++  M ++M  KF
Subjt:  HELCLIQEIILEYSLHEYALLSLMTLSMQTKF

P08770 Putative AC transposase1.9e-0832.74Show/hide
Query:  DVPTRWNSTFTMLDGAIECQKTFERLEEHDP----SYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYA
        DV TRWNST+ ML  A+  +    RL+  DP    +  PK      E+W       K LK F ++T   S + + T+N+F+   C I+++I ++ +HE  
Subjt:  DVPTRWNSTFTMLDGAIECQKTFERLEEHDP----SYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYA

Query:  LLSLMTLSMQTKF
        ++  M ++M  KF
Subjt:  LLSLMTLSMQTKF

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.2e-0528.83Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        +DV T+WN+T+ ML  A++ ++ F  LE  D +Y   ++    EDW   +     LK   +       +   TSN+FFHE   +Q  +   + HE  + S
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN
         +   M  +F+
Subjt:  LMTLSMQTKFN

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 31.7e-0428.83Show/hide
Query:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS
        +DV T+WN+T+ ML  A++ Q+ F  LE  D  Y   ++    EDW   +     L    +       +   TSNIFFHE   +Q  +     HE  +  
Subjt:  MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLS

Query:  LMTLSMQTKFN
             M  +F+
Subjt:  LMTLSMQTKFN

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTCCAACACGATGGAATTCTACTTTTACTATGCTGGATGGAGCAATTGAGTGTCAAAAGACATTTGAAAGATTAGAGGAGCACGACCCTAGTTATTTACCAAA
GGATGATATTTCTATTGTTGAAGATTGGGATACTACAAAAATGTTTGTAAAGTCCCTAAAAACTTTTTCAGAGGTAACAATGAAGTTTTCTGTATCTATGTTTGTGACTT
CAAATATATTTTTTCACGAACTCTGTTTAATCCAAGAAATAATTCTTGAATACTCGTTACATGAGTATGCATTATTGAGTCTTATGACATTAAGCATGCAGACAAAATTC
AATTGGGATATA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTTCCAACACGATGGAATTCTACTTTTACTATGCTGGATGGAGCAATTGAGTGTCAAAAGACATTTGAAAGATTAGAGGAGCACGACCCTAGTTATTTACCAAA
GGATGATATTTCTATTGTTGAAGATTGGGATACTACAAAAATGTTTGTAAAGTCCCTAAAAACTTTTTCAGAGGTAACAATGAAGTTTTCTGTATCTATGTTTGTGACTT
CAAATATATTTTTTCACGAACTCTGTTTAATCCAAGAAATAATTCTTGAATACTCGTTACATGAGTATGCATTATTGAGTCTTATGACATTAAGCATGCAGACAAAATTC
AATTGGGATATA
Protein sequenceShow/hide protein sequence
MDVPTRWNSTFTMLDGAIECQKTFERLEEHDPSYLPKDDISIVEDWDTTKMFVKSLKTFSEVTMKFSVSMFVTSNIFFHELCLIQEIILEYSLHEYALLSLMTLSMQTKF
NWDI