CuGenDBv2

Gene ID	Cucsat.G16351
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	ctg2279:30518..34722
RNA-Seq Expression	Cucsat.G16351
Synteny	Cucsat.G16351
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006281 - DNA repair (biological process) GO:0006301 - postreplication repair (biological process) GO:0006310 - DNA recombination (biological process) GO:0016567 - protein ubiquitination (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0016740 - transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8649414.1 hypothetical protein Csa_021680 [Cucumis sativus]

7.87e-221

88.01

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Query:  SRRYESGYHSPNFSELR-------GFTMPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGR
        SRRYESGYHSPNFSELR       GFTMPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGR
Subjt:  SRRYESGYHSPNFSELR-------GFTMPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGR

Query:  VYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLGD-------------TGSQSQVI----------------PA
        VYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQ  D             T  +S  +                PA
Subjt:  VYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLGD-------------TGSQSQVI----------------PA

Query:  AFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRW
        AFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRW
Subjt:  AFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRW

Query:  QSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
        QSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
Subjt:  QSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR

XP_008449859.1 PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo]

8.90e-211

94.87

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        FKAIVEAIAQD SAQGGISNISALNLQLENQLGDTG QSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPP-
        NEAGVKAELCS+EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS+LNVDIDLGPNEDSTAEASQPPP 
Subjt:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPP-

Query:  TRRTTRSSARQR
        TRR TR+S RQR
Subjt:  TRRTTRSSARQR

XP_031740711.1 non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus]

1.19e-208

89.12

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGD-------------TGSQSQVI----------------PAAFKNFSKSHKEKTIAELAQDKWLDCTP
        FKAIVEAIAQDSSAQGGISNISALNLQLENQ  D             T  +S  +                PAAFKNFSKSHKEKTIAELAQDKWLDCTP
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGD-------------TGSQSQVI----------------PAAFKNFSKSHKEKTIAELAQDKWLDCTP

Query:  DGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH
        DGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH
Subjt:  DGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH

Query:  KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
        KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
Subjt:  KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR

XP_038900598.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida]

1.21e-197

88.05

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Query:  SELRGFTMPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKY
        SEL GF MPELSWRHHTLIQ+LL+RGPLRED FHLLF +ITGKTPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKY
Subjt:  SELRGFTMPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKY

Query:  SVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSND
        SVPQIA +KAIVEAIAQD SAQGGISNISALNLQLENQ+GDTGSQSQVIPAAFKNFS S KEKTIAELAQDKWL C+PDGFVNLGVRSFLDLRSWFRSND
Subjt:  SVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSND

Query:  VPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAE
        VPSCEVCNEAGVKAELC+TE CTVRVH+YCLKKMLSNKKSK+ACPGCG +W+ST SNIE +EEEDEPDT TQDQPSSHKRKKSRLN+DIDLG NED  AE
Subjt:  VPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAE

Query:  ASQPPPTRRTTRSSARQR
        A QPP +RR TR SAR R
Subjt:  ASQPPPTRRTTRSSARQR

XP_038900599.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida]

3.63e-196

88.42

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQ+LL+RGPLRED FHLLF +ITGKTPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQD SAQGGISNISALNLQLENQ+GDTGSQSQVIPAAFKNFS S KEKTIAELAQDKWL C+PDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT
        NEAGVKAELC+TE CTVRVH+YCLKKMLSNKKSK+ACPGCG +W+ST SNIE +EEEDEPDT TQDQPSSHKRKKSRLN+DIDLG NED  AEA QPP +
Subjt:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT

Query:  RRTTRSSARQR
        RR TR SAR R
Subjt:  RRTTRSSARQR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZ19 Non-structural maintenance of chromosomes element 1 homolog

1.87e-223

100

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT
        NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT
Subjt:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT

Query:  RRTTRSSARQR
        RRTTRSSARQR
Subjt:  RRTTRSSARQR

A0A1S3BMD8 Non-structural maintenance of chromosomes element 1 homolog

4.31e-211

94.87

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        FKAIVEAIAQD SAQGGISNISALNLQLENQLGDTG QSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPP-
        NEAGVKAELCS+EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS+LNVDIDLGPNEDSTAEASQPPP 
Subjt:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPP-

Query:  TRRTTRSSARQR
        TRR TR+S RQR
Subjt:  TRRTTRSSARQR

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

5.82e-181

83.07

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        M ELSWRHHTLIQ+LL+RGPLREDQFHL+F +ITGK+PDNDQQ+FN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQS-QVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        +KAIVEAIAQD SAQGGISNI+AL+LQLENQLGD GSQS QVIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQS-QVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPP
        CNEAGVKAELC  E CTVRVHQYCLKKMLSNKKSK+ACPGCGT+W+ST +N+E KEEEDEPD RTQ Q SS +RKKSRLN+D+D   ++ + A ASQPPP
Subjt:  CNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPP

Query:  -TRRTTRSSARQR
         TRR TRSSARQR
Subjt:  -TRRTTRSSARQR

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

1.30e-181

83.12

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        M ELSWRHHTLIQ+LL+RGPLRED FHLLF +IT K+PDND+Q+FN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQD SAQGGISNI+AL+LQLENQLGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVRSFLDLRSWFR+ND+PSCEVC
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTA--EASQPP
        NEAGVKAELCS E CTVRVH+YCLKKMLSNKKSK+ACP CGT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID GPN DS A  +ASQPP
Subjt:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTA--EASQPP

Query:  P-TRRTTRSSARQR
        P TRR TRSSA QR
Subjt:  P-TRRTTRSSARQR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

1.17e-181

83.12

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        M ELSWRHHTLIQ+LL+RGPLRED FHLLF +IT K+PDND+Q+FN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQD SAQGGISNI+AL+LQLENQLGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVRSFLDLRSWFR+ND+PSCEVC
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTA--EASQPP
        NEAGVKAELCS E CTVRVH+YCLKKMLSNKKSK+ACP CGT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID GPN DS A  +ASQPP
Subjt:  NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTA--EASQPP

Query:  P-TRRTTRSSARQR
        P TRR TRSSA QR
Subjt:  P-TRRTTRSSARQR

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

3.8e-09

23.3

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Query:  ELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDN-DQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALF
        +++  H   +Q L+S G +       L +        N      + ++  +NK L     ++     + DG  YY LVN V +D +K+ + Y+  ++ LF
Subjt:  ELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDN-DQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALF

Query:  KAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRS--NDVPS-CE
        +  +E I    S  G    IS LNL  E Q               K   K   E+ +    QDKWL    +G   L  R  ++L  +  +   DV   C 
Subjt:  KAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRS--NDVPS-CE

Query:  VCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSR
        VC++  ++ +LC  E C + +H  C   +     +   CP C   W     ++   +   +  + +Q  P   + ++SR
Subjt:  VCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSR

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

2.4e-11

26.79

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Query:  DGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCT
        DG  YY LVN V +D +K+ + Y+  ++ LF+  +E I    S  G  ++IS LNL  E Q               K   K   E+ +    Q+KWL   
Subjt:  DGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCT

Query:  PDGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQ
         +G   L  R  ++L  + R+   DV   C VC +  ++++LC  E C + +H  C  K   + K+   CP C   W     ++     +    ++T+  
Subjt:  PDGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQ

Query:  PSSHKRKKS
           ++R K+
Subjt:  PSSHKRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

3.2e-91

54.63

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL
        M  LSW+HHTLIQ+L+SRGPL+E +FH +F  +TG+ P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VNNV+DDQSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAL

Query:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQS-QVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        FK I+EAIAQD +AQG IS+  ALN++LENQ+    S S Q +P AFKNFS + KEKT+ EL +DKWL  T +  + LG+RS LDLRSWFR+NDVPSCEV
Subjt:  FKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQS-QVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQ-STTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPP
        CNEAGVKA+LC TE C VR+H+YCLKK+LS +  K+ C GCG  W  S  +  E  EE    +  ++ Q ++ K K+ R   D     +  ++  ++   
Subjt:  CNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQ-STTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPP

Query:  PTRRTTRSSARQR
         TRR TRS    R
Subjt:  PTRRTTRSSARQR

Sequences

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CDS sequence

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TCACGCCGTTATGAAAGCGGATATCATTCGCCAAACTTCAGTGAACTGCGGGGGTTCACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTC
TCGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCAAATCACTGGAAAAACTCCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATA
AAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGTAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGA
ACAAAGTATTCAGTTCCACAGATTGCCCTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATTCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCA
GCTGGAAAATCAGCTGGGGGATACAGGATCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCTGAGCTTGCTCAGG
ATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGC
AATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTACTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAAGGCCTG
TCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGA
AGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACCGCAGAAGCTTCCCAACCTCCTCCTACAAGGAGAACAACACGAAGTTCTGCACGCCAG
CGGTAG

mRNA sequence

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Protein sequence

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SRRYESGYHSPNFSELRGFTMPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLG
TKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
NEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQ
R

Cucsat.G16351 (gene) of Cucumber (B10) v3 genome