; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G16450 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16450
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationctg2387:95..3891
RNA-Seq ExpressionCucsat.G16450
SyntenyCucsat.G16450
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136978.1 cold-regulated protein 27 isoform X1 [Cucumis sativus]2.63e-9979.59Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR
        QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSE+         + +I                       H  S  
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR

Query:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
Subjt:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

XP_008454952.1 PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]5.72e-8270.92Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR
        QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSE+         + +I                       H  S  
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR

Query:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        KQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQVVPFKRLS
Subjt:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

XP_008454953.1 PREDICTED: uncharacterized protein LOC103495241 isoform X2 [Cucumis melo]1.20e-9789.63Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS
        QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSEVRQHIHKKSGRKQCSLETPDLLEEC SCSDRRHIR+MTNSC S
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS

Query:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        ARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQVVPFKRLS
Subjt:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

XP_011658902.1 cold-regulated protein 28 isoform X2 [Cucumis sativus]5.15e-115100Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS
        QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS

Query:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
Subjt:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

XP_038887004.1 cold-regulated protein 28 isoform X2 [Benincasa hispida]4.63e-7774.39Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS
        QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR  HALS +QKM  KP  P+ISSSEVRQHIH K GRKQC+ E PD+LEEC SCSDRRH+R  +NSC S
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS

Query:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        AR+SQ   PCC +S  IITEVSDQNFVD+ P ELS G+PIAKRLKK SSD S + QVVP+KR S
Subjt:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z2 Uncharacterized protein1.28e-9979.59Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR
        QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSE+         + +I                       H  S  
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR

Query:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
Subjt:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

A0A1S3BZQ8 uncharacterized protein LOC103495241 isoform X25.81e-9889.63Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS
        QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSEVRQHIHKKSGRKQCSLETPDLLEEC SCSDRRHIR+MTNSC S
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS

Query:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        ARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQVVPFKRLS
Subjt:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X12.77e-8270.92Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR
        QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSE+         + +I                       H  S  
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR

Query:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        KQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQVVPFKRLS
Subjt:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

A0A5D3C4A3 Cold regulated protein 27, putative isoform 22.59e-7569.68Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR
        QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSE+         + +I                       H  S  
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEV---------RQHI-----------------------HKKSGR

Query:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ
        KQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQ
Subjt:  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ

A0A6J1JIM0 uncharacterized protein LOC111486142 isoform X11.85e-7473.78Show/hide
Query:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS
        QLDA QTHWTDEKHR YL SLEASFVQ+LHQ+R + ALS KQKMR +P  P ISSSEVRQ+IH KSGRKQC+LETPDL+EE  S SDRRH+R   NS R 
Subjt:  QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRS

Query:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        AR+SQ   PCC  SYTIITEVSDQNFVDN PGE+S GMP AKRLKKASSD S + QVVP+KR S
Subjt:  ARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCAACATAGGCCTATGCATGC
TTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCAGGCCTGATATATCTTCTTCAGAGGTGAGGCAACACATCCACAAAAAGAGTGGGAGAAAGCAGTGTAGTTTGG
AAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGACGAACTCCTGTAGATCTGCCAGAAATTCTCAGCCGACCCGTCCATGC
TGTTGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTAGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGC
TTCTTCTGATTTTTCAGACAGTGCCCAGGTTGTACCATTTAAAAGATTATCCTAA
mRNA sequenceShow/hide mRNA sequence
CAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCAACATAGGCCTATGCATGC
TTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCAGGCCTGATATATCTTCTTCAGAGGTGAGGCAACACATCCACAAAAAGAGTGGGAGAAAGCAGTGTAGTTTGG
AAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGACGAACTCCTGTAGATCTGCCAGAAATTCTCAGCCGACCCGTCCATGC
TGTTGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTAGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGC
TTCTTCTGATTTTTCAGACAGTGCCCAGGTTGTACCATTTAAAAGATTATCCTAA
Protein sequenceShow/hide protein sequence
QLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEVRQHIHKKSGRKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPC
CCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS