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Cucsat.G16473 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16473
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptiontype IV secretion system protein virB10-like
Genome locationctg2387:192578..195932
RNA-Seq ExpressionCucsat.G16473
SyntenyCucsat.G16473
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645870.1 hypothetical protein Csa_017149 [Cucumis sativus]1.38e-89100Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG

Query:  GPPPEIKQSAHADADAKGENLQSAAPGTGGA
        GPPPEIKQSAHADADAKGENLQSAAPGTGGA
Subjt:  GPPPEIKQSAHADADAKGENLQSAAPGTGGA

KAG7011671.1 hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyrosperma]1.67e-6983.46Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP---HLRHPPPLDSVPVAE
        MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E+WVEKKCASCLDGSLDPPPPPP   HLRHPPPLD+VPV E
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP---HLRHPPPLDSVPVAE

Query:  PLGGPPPEIKQSAHADADAKGENLQSAAPGTGG
        PLGG PPEIKQ A    D K ENLQSAAPGTGG
Subjt:  PLGGPPPEIKQSAHADADAKGENLQSAAPGTGG

XP_008455516.1 PREDICTED: type IV secretion system protein virB10-like [Cucumis melo]6.01e-8294.03Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP----HLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDWVEKKCASCLDGSLDPPPPPP    HLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP----HLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGG
        EPLGGPPPEIKQ A  DADAKGENLQSAAPGTGG
Subjt:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGG

XP_022972364.1 uncharacterized protein LOC111470940 [Cucurbita maxima]5.69e-7181.29Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
        MSTP DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E+WVEKKCASCLDGSLDPPPPP HLRHPPPLD+VPV EPLG
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG

Query:  GPPPEIKQSAHADADAKGENLQSAAPGTGGA-HPDLLIS
        G PPEIKQ A    D K ENLQSAAPGTGG  +PD   S
Subjt:  GPPPEIKQSAHADADAKGENLQSAAPGTGGA-HPDLLIS

XP_038887147.1 uncharacterized protein LOC120077337 [Benincasa hispida]6.84e-7587.41Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP-HLRHPPPLDSVPVAEPL
        MSTP+DQLQPPP LHS+HASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDW+EKKCASCLDGSLDPPPPPP HLR PP LDSVPVAEPL
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP-HLRHPPPLDSVPVAEPL

Query:  GGPPPEIKQSAHADA----DAKGENLQSAAPGTGG
        GGPPPEIKQ A ADA    D K ENLQSA PGTGG
Subjt:  GGPPPEIKQSAHADA----DAKGENLQSAAPGTGG

TrEMBL top hitse value%identityAlignment
A0A0A0K6N4 Uncharacterized protein2.63e-89100Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG

Query:  GPPPEIKQSAHADADAKGENLQSAAPGTGG
        GPPPEIKQSAHADADAKGENLQSAAPGTGG
Subjt:  GPPPEIKQSAHADADAKGENLQSAAPGTGG

A0A1S3C1T9 type IV secretion system protein virB10-like2.91e-8294.03Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP----HLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDWVEKKCASCLDGSLDPPPPPP    HLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP----HLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGG
        EPLGGPPPEIKQ A  DADAKGENLQSAAPGTGG
Subjt:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGG

A0A5A7SPN0 Type IV secretion system protein virB10-like2.91e-8294.03Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP----HLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDWVEKKCASCLDGSLDPPPPPP    HLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP----HLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGG
        EPLGGPPPEIKQ A  DADAKGENLQSAAPGTGG
Subjt:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGG

A0A6J1GL66 uncharacterized protein LOC1114553839.51e-7080.71Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP-HLRHPPPLDSVPVAEPL
        MSTP+DQLQPPP  HS + SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E+WVEKKCASCLDGSLDPPPPPP HLRHPPPLD+VPV EPL
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPP-HLRHPPPLDSVPVAEPL

Query:  GGPPPEIKQSAHADADAKGENLQSAAPGTGGAH-PDLLIS
        GG PPEIKQ A    D K ENLQSAAPGTGG   PD   S
Subjt:  GGPPPEIKQSAHADADAKGENLQSAAPGTGGAH-PDLLIS

A0A6J1IBA8 uncharacterized protein LOC1114709402.75e-7181.29Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
        MSTP DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E+WVEKKCASCLDGSLDPPPPP HLRHPPPLD+VPV EPLG
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG

Query:  GPPPEIKQSAHADADAKGENLQSAAPGTGGA-HPDLLIS
        G PPEIKQ A    D K ENLQSAAPGTGG  +PD   S
Subjt:  GPPPEIKQSAHADADAKGENLQSAAPGTGGA-HPDLLIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein3.0e-1443.33Show/hide
Query:  QPPPPLHSS----------HASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPP
        QPPP    S          ++++GP IAV  V+++L V+A +IGRLCSG+ + GYG  YD+E W E +C SC+DG + P  P P    PP
Subjt:  QPPPPLHSS----------HASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPP

AT3G57500.1 unknown protein1.3e-1244.21Show/hide
Query:  QPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDG-----SLDPPPPPPHLRHPPPLDSVPVAEP
        Q  P  +S H S+  L+ VLAVI+IL V+AG+  RLC GR +  +G  +D+E WVE+KC SC+D      S  P PPPP    PPP  +   ++P
Subjt:  QPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDG-----SLDPPPPPPHLRHPPPLDSVPVAEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCACTCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCAT
TGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCT
CCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCC
CATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACCGGCGGGGCACATCCAGACCTTCTCATATCGCAAATCAACAAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCACTCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCAT
TGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCT
CCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCC
CATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACCGGCGGGGCACATCCAGACCTTCTCATATCGCAAATCAACAAA
Protein sequenceShow/hide protein sequence
MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQSA
HADADAKGENLQSAAPGTGGAHPDLLISQINK