; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G16547 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16547
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionDNA-directed RNA polymerase III subunit rpc4-like
Genome locationctg24:476652..481770
RNA-Seq ExpressionCucsat.G16547
SyntenyCucsat.G16547
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0006412 - translation (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044650.1 DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo var. makuwa]2.08e-22294.91Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
        MKN D SPPRRKVKFAPKSSQR+RPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVE+KSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND

Query:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA
        IEPEVDEDEEFVLPVA D NEDGK+FDKKTKDGI E SSSAM TKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPE LDEAEFGQD MNREYDENSVIPA
Subjt:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA

Query:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
        LDLGL DENTE+TKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGS+CSFLQHVVAI
Subjt:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI

Query:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR
        NTE+GQCCDLGDIG RVVVTPDISSLLNSVTNLR
Subjt:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR

TYK16939.1 DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo var. makuwa]6.86e-20794.65Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
        MKN D SPPRRKVKFAPKSSQR+RPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND

Query:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA
        IEPEVDEDEEFVLPVA D NEDGK+FDKKTKDGI E SSSAM TKTKRDYKEPWDYQNSYYPTTLPLRMPYSGD E LDEAEFGQD MNREYDENSVIPA
Subjt:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA

Query:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
        LDLGL DENTE+TKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGS+CSFLQHVVAI
Subjt:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI

Query:  NTEEGQCCDLGDIGNRVV
        NTE+GQCCDLGDIG RVV
Subjt:  NTEEGQCCDLGDIGNRVV

XP_004146914.1 DNA-directed RNA polymerase III subunit rpc4 [Cucumis sativus]8.98e-23399.1Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
        MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND

Query:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA
        IEPEVDEDEEFVLPVARD NEDGKYFDKKTKDGITE SSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPE LDEAEFGQDVMNREYDENSVIPA
Subjt:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA

Query:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
        LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
Subjt:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI

Query:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR
        NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR
Subjt:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR

XP_008453902.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo]1.70e-22194.91Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
        MKN D SPPRRKVKFAPKSSQR+RPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND

Query:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA
        IEPEVDEDEEFVLPVA D NEDGK+FDKKTKDGI E SSSAM TKTKRDYKEPWDYQNSYYPTTLPLRMPYSGD E LDEAEFGQD MNREYDENSVIPA
Subjt:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA

Query:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
        LDLGL DENTE+TKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGS+CSFLQHVVAI
Subjt:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI

Query:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR
        NTE+GQCCDLGDIG RVVVTPDISSLLNSVTNLR
Subjt:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR

XP_038879339.1 DNA-directed RNA polymerase III subunit rpc4-like [Benincasa hispida]5.11e-19584.68Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
        MKN D SPPRRKVKFAPKS+ R+R  PPPVQK EDEDG+GYVAQTRYLLRRA ENLGKR NKV++KSSVQVAFGPGA STSSSIRTYGVPKVEN SRKND
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND

Query:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA
        IEP+VDEDEEF+LP+  D  E+GK FDKKTKDGI E SSSA+ TKTK+DYKEPWDY NS YPTTLP+RMPYSGDPE LDEAEFGQD  +REYDE+SVIPA
Subjt:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA

Query:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
        LDLGLLDE TE+TKYFFQLPARLPLPKQSSTATGKEKVGN RSS S  SS+L DLKKLSAGCMGKLLIYKSGAIKLRLGD LYDVSSGS+CSFLQHVVAI
Subjt:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI

Query:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNL
        NT+EGQCCDLGDIG RV+VTPDISSLLNS+TNL
Subjt:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNL

TrEMBL top hitse value%identityAlignment
A0A0A0KZ61 Uncharacterized protein4.35e-23399.1Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
        MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND

Query:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA
        IEPEVDEDEEFVLPVARD NEDGKYFDKKTKDGITE SSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPE LDEAEFGQDVMNREYDENSVIPA
Subjt:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA

Query:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
        LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
Subjt:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI

Query:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR
        NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR
Subjt:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR

A0A1S3BYJ9 DNA-directed RNA polymerase III subunit rpc4-like8.25e-22294.91Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
        MKN D SPPRRKVKFAPKSSQR+RPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND

Query:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA
        IEPEVDEDEEFVLPVA D NEDGK+FDKKTKDGI E SSSAM TKTKRDYKEPWDYQNSYYPTTLPLRMPYSGD E LDEAEFGQD MNREYDENSVIPA
Subjt:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA

Query:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
        LDLGL DENTE+TKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGS+CSFLQHVVAI
Subjt:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI

Query:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR
        NTE+GQCCDLGDIG RVVVTPDISSLLNSVTNLR
Subjt:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR

A0A5A7TN83 DNA-directed RNA polymerase III subunit rpc4-like1.01e-22294.91Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
        MKN D SPPRRKVKFAPKSSQR+RPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVE+KSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND

Query:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA
        IEPEVDEDEEFVLPVA D NEDGK+FDKKTKDGI E SSSAM TKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPE LDEAEFGQD MNREYDENSVIPA
Subjt:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA

Query:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
        LDLGL DENTE+TKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGS+CSFLQHVVAI
Subjt:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI

Query:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR
        NTE+GQCCDLGDIG RVVVTPDISSLLNSVTNLR
Subjt:  NTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR

A0A5D3D2X2 Ribosomal protein L153.32e-20794.65Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
        MKN D SPPRRKVKFAPKSSQR+RPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKND

Query:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA
        IEPEVDEDEEFVLPVA D NEDGK+FDKKTKDGI E SSSAM TKTKRDYKEPWDYQNSYYPTTLPLRMPYSGD E LDEAEFGQD MNREYDENSVIPA
Subjt:  IEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPA

Query:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI
        LDLGL DENTE+TKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGS+CSFLQHVVAI
Subjt:  LDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI

Query:  NTEEGQCCDLGDIGNRVV
        NTE+GQCCDLGDIG RVV
Subjt:  NTEEGQCCDLGDIGNRVV

A0A6J1E8A8 DNA-directed RNA polymerase III subunit rpc4-like3.14e-16675.52Show/hide
Query:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTS--SSIRTYGVPKVENGSRK
        MKN DPSPPRRK+KFAPKS+ R+RPPP P  KTEDED  G VAQTRYLLRRA ENLGKR NKVEKKSSVQVAFGPGA S S  SSIRTYGVPK+ N SRK
Subjt:  MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTS--SSIRTYGVPKVENGSRK

Query:  NDIEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVI
         DIEPE  EDEE +LP   D  E GK  ++KT+D           TK  +DYKEPWDY NSYYPTTLPLRMPYSGDPE+LDEAEFGQDVM+REYDENS I
Subjt:  NDIEPEVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVI

Query:  PALDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVV
        PALDLGLLDEN+E+T+YFFQLPA LP PK+SST+TGKEKVGN RSS ST+SS+L DL+ L  G MGKLLIYKSGA+KLRLGD LYDVSSG +CSFLQHVV
Subjt:  PALDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVV

Query:  AINTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNL
        AINT++GQCCDLG+IG RVVVTPDI SLLNS+T+L
Subjt:  AINTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNL

SwissProt top hitse value%identityAlignment
P05423 DNA-directed RNA polymerase III subunit RPC44.7e-0732.58Show/hide
Query:  ESTKYFFQLPARLP--LPKQSSTATGKEKVG---------NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVA
        E    F QLP  LP   P Q       E  G           +   +  + +   L  L+ G +GKLLI KSG ++L LG +  DV+ G+ CSFLQ +V+
Subjt:  ESTKYFFQLPARLP--LPKQSSTATGKEKVG---------NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVA

Query:  I---NTEEGQCCDLGDIGNRVVVTPDISSLLN
        +   ++  G+   LG + +++V +PD  SLL+
Subjt:  I---NTEEGQCCDLGDIGNRVVVTPDISSLLN

P25441 DNA-directed RNA polymerase III subunit RPC45.2e-0630.17Show/hide
Query:  FQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDL---DDLKKLS----AGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAIN-TEEGQCC
        FQLP RLP  ++ +    KE +    S  S    ++   D    LS    AG +G + ++KSG + +++G+++ D+  G+  +FLQ V+A++  ++    
Subjt:  FQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDL---DDLKKLS----AGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAIN-TEEGQCC

Query:  D-LGDIGNRVVVTPDI
        + LG +  ++VVTP I
Subjt:  D-LGDIGNRVVVTPDI

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC46.2e-0737.11Show/hide
Query:  KEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI---NTEEGQCCDLGDIGNRVVVTPDISSLLN
        +EK   +R + +T +     L  L+ G +GKLLI KSG ++L LG +  DV+ G+ CSFLQ +V++   ++  G    LG I +++V +P+  SLL+
Subjt:  KEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI---NTEEGQCCDLGDIGNRVVVTPDISSLLN

Q8T1V7 DNA-directed RNA polymerase III subunit rpc44.4e-0536.36Show/hide
Query:  LKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAINTEEG-----QCCDLGDIGNRVVVTPDISSL
        +K++ +G +G L IYKSG   L++G + YD+SSG    FL+ V    T+ G      C  LG     +V  P IS +
Subjt:  LKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAINTEEG-----QCCDLGDIGNRVVVTPDISSL

Q91WD1 DNA-directed RNA polymerase III subunit RPC42.8e-0733.07Show/hide
Query:  FFQLPARLP--LPKQSSTATGKEKVG---------NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI---N
        F QLP  LP   P Q       E  G           +   +  + +   L  L+ G +GKLLI KSG ++L LG +  DV+ G+ CSFLQ +V++   +
Subjt:  FFQLPARLP--LPKQSSTATGKEKVG---------NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAI---N

Query:  TEEGQCCDLGDIGNRVVVTPDISSLLN
        +  G+   LG + +++V +PD  SLL+
Subjt:  TEEGQCCDLGDIGNRVVVTPDISSLLN

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC46.5e-4437.46Show/hide
Query:  DPSPPRRKVKFAPKSSQ-RKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEP
        D    + K +F P   +  +R P  P   TE E+ E  +  +R   RR    +G+R     K SS +VAF P    +  +IR++GVPK E+    +D+ P
Subjt:  DPSPPRRKVKFAPKSSQ-RKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEP

Query:  EVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPALDL
                 +     A EDG+                   T+T  DY EPWDY+NSYYPT LPLR P SGD ELLD+ EFG+   NR+YDEN++  A +L
Subjt:  EVDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPALDL

Query:  GLLD-ENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAINT
        GL   ++++   + F++P  LP+ KQ++ AT K      RS    SS   +  + L  G MGK+L+YKSGA+KL++GD L+DVS G        VVAI+ 
Subjt:  GLLD-ENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAINT

Query:  EEGQCCDLGDIGNRVVVTPDISSLLNSVTNL
        +   C  +G     V VTPD+ SLLN  +++
Subjt:  EEGQCCDLGDIGNRVVVTPDISSLLNSVTNL

AT5G09380.1 RNA polymerase III RPC41.8e-3836.06Show/hide
Query:  DPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPE
        +  PP RK+KFAPK+   KR P P V+    ED     AQ   LLRR NE   ++    +K  + QVA+  G               V N +R N     
Subjt:  DPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPE

Query:  VDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKR-DYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPALDL
                           KY ++         + +   T T+  +YKEPWDY  SYYP TLP+R PY+GDPE+LD  EF Q      + E+S+  A +L
Subjt:  VDEDEEFVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKR-DYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPALDL

Query:  GLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAINTE
        GL++++ E   +F +LP+ +PL      +T  E +    +          DLK L  G MGKLL+YKSGA+K++LG++LYDVS G    F Q V+ +NTE
Subjt:  GLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAINTE

Query:  EGQCCDLGDIGNRVVVTPDISSLLNSVTNL
        +  CC +GD+    V+TPDI S+L  + N+
Subjt:  EGQCCDLGDIGNRVVVTPDISSLLNSVTNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATTCCGATCCATCTCCTCCACGCAGAAAGGTCAAATTCGCTCCAAAATCCTCACAGCGCAAGAGGCCACCACCACCACCGGTTCAGAAAACTGAAGATGAAGA
TGGTGAGGGTTATGTTGCTCAAACTCGCTACCTATTACGCCGTGCCAATGAGAATCTCGGAAAACGAGCGAACAAGGTCGAAAAAAAATCTTCAGTGCAAGTTGCATTCG
GTCCTGGCGCTGAATCAACGTCATCTTCTATTAGAACATATGGAGTTCCCAAAGTAGAAAACGGTAGCAGAAAAAATGACATTGAGCCTGAAGTTGATGAAGATGAGGAG
TTTGTCTTGCCAGTGGCTAGGGATGCTAACGAAGATGGAAAATATTTTGATAAAAAAACCAAAGATGGAATTACTGAATTCTCTAGTTCGGCTATGGAAACCAAGACCAA
GAGGGATTACAAAGAACCTTGGGATTACCAAAATTCTTACTATCCTACTACACTCCCTTTACGGATGCCTTACTCTGGAGACCCTGAACTACTTGATGAAGCCGAGTTTG
GGCAGGATGTGATGAATAGAGAGTACGATGAGAACTCTGTAATACCTGCCTTGGATCTCGGGTTGCTGGATGAAAACACAGAGAGTACTAAGTACTTCTTTCAGCTTCCT
GCACGTCTTCCTTTACCCAAACAATCGTCTACTGCAACGGGAAAGGAGAAAGTAGGAAATTCGAGATCTTCAAACAGCACGAGCTCGTCCGATCTCGACGATTTGAAGAA
ACTGTCTGCTGGATGTATGGGGAAACTACTGATATACAAGAGTGGAGCTATTAAGTTGAGGCTGGGAGACATTCTTTACGATGTTTCTTCTGGATCAAACTGCAGTTTTC
TTCAACATGTTGTGGCAATCAACACTGAAGAGGGACAGTGCTGTGATCTCGGAGACATTGGCAACCGAGTTGTTGTAACACCGGATATTAGTTCCCTTTTAAATTCAGTG
ACTAATTTGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATTCCGATCCATCTCCTCCACGCAGAAAGGTCAAATTCGCTCCAAAATCCTCACAGCGCAAGAGGCCACCACCACCACCGGTTCAGAAAACTGAAGATGAAGA
TGGTGAGGGTTATGTTGCTCAAACTCGCTACCTATTACGCCGTGCCAATGAGAATCTCGGAAAACGAGCGAACAAGGTCGAAAAAAAATCTTCAGTGCAAGTTGCATTCG
GTCCTGGCGCTGAATCAACGTCATCTTCTATTAGAACATATGGAGTTCCCAAAGTAGAAAACGGTAGCAGAAAAAATGACATTGAGCCTGAAGTTGATGAAGATGAGGAG
TTTGTCTTGCCAGTGGCTAGGGATGCTAACGAAGATGGAAAATATTTTGATAAAAAAACCAAAGATGGAATTACTGAATTCTCTAGTTCGGCTATGGAAACCAAGACCAA
GAGGGATTACAAAGAACCTTGGGATTACCAAAATTCTTACTATCCTACTACACTCCCTTTACGGATGCCTTACTCTGGAGACCCTGAACTACTTGATGAAGCCGAGTTTG
GGCAGGATGTGATGAATAGAGAGTACGATGAGAACTCTGTAATACCTGCCTTGGATCTCGGGTTGCTGGATGAAAACACAGAGAGTACTAAGTACTTCTTTCAGCTTCCT
GCACGTCTTCCTTTACCCAAACAATCGTCTACTGCAACGGGAAAGGAGAAAGTAGGAAATTCGAGATCTTCAAACAGCACGAGCTCGTCCGATCTCGACGATTTGAAGAA
ACTGTCTGCTGGATGTATGGGGAAACTACTGATATACAAGAGTGGAGCTATTAAGTTGAGGCTGGGAGACATTCTTTACGATGTTTCTTCTGGATCAAACTGCAGTTTTC
TTCAACATGTTGTGGCAATCAACACTGAAGAGGGACAGTGCTGTGATCTCGGAGACATTGGCAACCGAGTTGTTGTAACACCGGATATTAGTTCCCTTTTAAATTCAGTG
ACTAATTTGAGATGA
Protein sequenceShow/hide protein sequence
MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEE
FVLPVARDANEDGKYFDKKTKDGITEFSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPELLDEAEFGQDVMNREYDENSVIPALDLGLLDENTESTKYFFQLP
ARLPLPKQSSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVAINTEEGQCCDLGDIGNRVVVTPDISSLLNSV
TNLR