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Cucsat.G16651 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16651
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCRC domain-containing protein
Genome locationctg24:2219742..2222034
RNA-Seq ExpressionCucsat.G16651
SyntenyCucsat.G16651
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005172 - CRC domain
IPR033467 - Tesmin/TSO1-like CXC domain
IPR044522 - CRC domain-containing protein TSO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV65987.1 CXC domain-containing protein [Cephalotus follicularis]6.96e-2036.3Show/hide
Query:  KRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA-----------------
        K+++K+ ++ ++  C  C    ++CL   CECFA  ++C + C C  ++CFN P YEDTV   ++QI S NP AF  KIV+ A                 
Subjt:  KRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA-----------------

Query:  ------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPD
              CNC +S C K  C C +A V C + C C  CCNP+G+ P+
Subjt:  ------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPD

KGN52869.1 hypothetical protein Csa_014688 [Cucumis sativus]5.34e-2337.74Show/hide
Query:  DNHSKIINFQTQ----------NICSEVSVEKKNDGVKYHNKNKKENNNLRNHQKQMSSRGSLNDMNYNRPTT-NTKRKRKS---DNAKKASPC-CHCKD
        D+HS + NF              I S++     ND + Y N    E     N  + +S   S N++N +  ++ +TKRKRK    +N   +SP  C+CK 
Subjt:  DNHSKIINFQTQ----------NICSEVSVEKKNDGVKYHNKNKKENNNLRNHQKQMSSRGSLNDMNYNRPTT-NTKRKRKS---DNAKKASPC-CHCKD

Query:  NGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA-------------CNCIESSCQKLDCPCLRAGVPCIE
        +  +CL   CECFA   FC EECGC  E+CFN P Y DTV  AK+++++   SAFD++ VR               CNC  S C++  C C +AGV C E
Subjt:  NGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA-------------CNCIESSCQKLDCPCLRAGVPCIE

Query:  ACHCQICCNPYG
        AC+CQ C NP G
Subjt:  ACHCQICCNPYG

XP_008454271.1 PREDICTED: protein tesmin/TSO1-like CXC 2 [Cucumis melo]2.61e-10077.95Show/hide
Query:  DNHSKIINF-QTQNICSEVSVEKKNDGVKYHNKNKKENNNLRNHQKQMSSRGSLNDMNYNR-PTTNTKRKR---KSDNAKKASPCCHCKDNGTECLTPDC
        DNHSKI NF +TQNIC+ +SVEK NDGV+YHNKNKKENNN+R+HQKQ S  GSLNDMNYN  PTT TKRK    K ++ KKASPCCHC +  TECLT DC
Subjt:  DNHSKIINF-QTQNICSEVSVEKKNDGVKYHNKNKKENNNLRNHQKQMSSRGSLNDMNYNR-PTTNTKRKR---KSDNAKKASPCCHCKDNGTECLTPDC

Query:  ECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGACNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPDQR
        ECFAREMFC EECGCD EDCFNTPLYEDTVDVAKEQIRSINPSAFDQ IVRGACNC +S+CQK+DCPCLRAG+ C EACHCQ+CCNPYGE PD +
Subjt:  ECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGACNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPDQR

XP_024018780.1 protein tesmin/TSO1-like CXC 2 isoform X2 [Morus notabilis]1.28e-1937.5Show/hide
Query:  DMNYNRPTTNTKRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA------
        D N N P    K++RK +NA +   C  C    ++CL   CECFA  ++C E C C  ++CFN P++EDTV   ++QI S NP AF  K++RG+      
Subjt:  DMNYNRPTTNTKRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA------

Query:  ----------------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYG
                        CNC +S+C K  C C + GV C  +C C+ C N YG
Subjt:  ----------------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYG

XP_038878069.1 protein tesmin/TSO1-like CXC 2 [Benincasa hispida]1.95e-3746.38Show/hide
Query:  QTQNICSEVSVEKKNDGVKYHN-------------KNKKENNNLRNHQKQMSSRGSLNDMNYNRPTTNTKRKRKS-----DNAKKASPCCHCKDNGTECL
        +T+NIC+E+ VEK N+GVKY N             KN   NN++RN+Q  MSS  S + +N     +++KRKR+      +N   + P C+C  +  ECL
Subjt:  QTQNICSEVSVEKKNDGVKYHN-------------KNKKENNNLRNHQKQMSSRGSLNDMNYNRPTTNTKRKRKS-----DNAKKASPCCHCKDNGTECL

Query:  TPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIV-----------RGACNCIESSCQKLDCPCLRAGVPCIEACHCQICC
           CECF   M+C E+CGC   DCFN  LYEDTV+V K+QI S NPSAF  K V           R  CNCI S C+K  CPC +AGVPC EACHCQ C 
Subjt:  TPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIV-----------RGACNCIESSCQKLDCPCLRAGVPCIEACHCQICC

Query:  NPYGESP
        NP G  P
Subjt:  NPYGESP

TrEMBL top hitse value%identityAlignment
A0A0A0KVD1 CRC domain-containing protein2.59e-2337.74Show/hide
Query:  DNHSKIINFQTQ----------NICSEVSVEKKNDGVKYHNKNKKENNNLRNHQKQMSSRGSLNDMNYNRPTT-NTKRKRKS---DNAKKASPC-CHCKD
        D+HS + NF              I S++     ND + Y N    E     N  + +S   S N++N +  ++ +TKRKRK    +N   +SP  C+CK 
Subjt:  DNHSKIINFQTQ----------NICSEVSVEKKNDGVKYHNKNKKENNNLRNHQKQMSSRGSLNDMNYNRPTT-NTKRKRKS---DNAKKASPC-CHCKD

Query:  NGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA-------------CNCIESSCQKLDCPCLRAGVPCIE
        +  +CL   CECFA   FC EECGC  E+CFN P Y DTV  AK+++++   SAFD++ VR               CNC  S C++  C C +AGV C E
Subjt:  NGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA-------------CNCIESSCQKLDCPCLRAGVPCIE

Query:  ACHCQICCNPYG
        AC+CQ C NP G
Subjt:  ACHCQICCNPYG

A0A1Q3BD73 CXC domain-containing protein3.37e-2036.3Show/hide
Query:  KRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA-----------------
        K+++K+ ++ ++  C  C    ++CL   CECFA  ++C + C C  ++CFN P YEDTV   ++QI S NP AF  KIV+ A                 
Subjt:  KRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA-----------------

Query:  ------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPD
              CNC +S C K  C C +A V C + C C  CCNP+G+ P+
Subjt:  ------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPD

A0A1S3BY78 protein tesmin/TSO1-like CXC 21.27e-10077.95Show/hide
Query:  DNHSKIINF-QTQNICSEVSVEKKNDGVKYHNKNKKENNNLRNHQKQMSSRGSLNDMNYNR-PTTNTKRKR---KSDNAKKASPCCHCKDNGTECLTPDC
        DNHSKI NF +TQNIC+ +SVEK NDGV+YHNKNKKENNN+R+HQKQ S  GSLNDMNYN  PTT TKRK    K ++ KKASPCCHC +  TECLT DC
Subjt:  DNHSKIINF-QTQNICSEVSVEKKNDGVKYHNKNKKENNNLRNHQKQMSSRGSLNDMNYNR-PTTNTKRKR---KSDNAKKASPCCHCKDNGTECLTPDC

Query:  ECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGACNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPDQR
        ECFAREMFC EECGCD EDCFNTPLYEDTVDVAKEQIRSINPSAFDQ IVRGACNC +S+CQK+DCPCLRAG+ C EACHCQ+CCNPYGE PD +
Subjt:  ECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGACNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPDQR

A0A803R8F9 Uncharacterized protein8.43e-2036.54Show/hide
Query:  GSLNDMNYNRPTTNTKRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA--
        GS+ +  +N+ +   KR+R S+NA +   C  C    ++CL   CECFA  ++C E C C  ++CFN P++EDTV   ++QI S NP AF  K++RG+  
Subjt:  GSLNDMNYNRPTTNTKRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA--

Query:  --------------------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYG
                            CNC +SSC K  C C + GV C  +C C+ C N +G
Subjt:  --------------------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYG

W9RCX7 CRC domain-containing protein6.19e-2037.5Show/hide
Query:  DMNYNRPTTNTKRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA------
        D N N P    K++RK +NA +   C  C    ++CL   CECFA  ++C E C C  ++CFN P++EDTV   ++QI S NP AF  K++RG+      
Subjt:  DMNYNRPTTNTKRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGA------

Query:  ----------------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYG
                        CNC +S+C K  C C + GV C  +C C+ C N YG
Subjt:  ----------------CNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYG

SwissProt top hitse value%identityAlignment
Q84JZ8 Protein tesmin/TSO1-like CXC 41.6e-1532.19Show/hide
Query:  KRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIV--------------------
        + ++ S    +   C  CK   ++CL   CECF+  +FC E C C  ++CFN P++ED V  ++E I++ NP AF  K+V                    
Subjt:  KRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIV--------------------

Query:  --RGACNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPDQ
          +  CNC +S C K  C C   GV C   C C  C N +G + +Q
Subjt:  --RGACNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPDQ

Arabidopsis top hitse value%identityAlignment
AT3G04850.1 Tesmin/TSO1-like CXC domain-containing protein1.1e-1632.19Show/hide
Query:  KRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIV--------------------
        + ++ S    +   C  CK   ++CL   CECF+  +FC E C C  ++CFN P++ED V  ++E I++ NP AF  K+V                    
Subjt:  KRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEECGCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIV--------------------

Query:  --RGACNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPDQ
          +  CNC +S C K  C C   GV C   C C  C N +G + +Q
Subjt:  --RGACNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATAATCACTCCAAGATCATCAATTTCCAAACTCAAAATATTTGTTCTGAGGTGTCTGTTGAGAAGAAAAATGATGGTGTTAAATATCATAACAAAAATAAGAA
AGAAAATAATAACTTAAGAAATCATCAAAAACAGATGTCTTCGAGAGGCTCCCTGAATGACATGAATTACAATAGGCCTACCACTAACACAAAAAGAAAGAGAAAGAGCG
ACAATGCAAAAAAGGCGAGCCCATGTTGCCATTGCAAAGACAATGGCACCGAGTGTCTAACACCTGATTGCGAATGCTTTGCAAGAGAAATGTTTTGCTGCGAAGAATGT
GGGTGTGATCATGAAGACTGCTTCAACACTCCTTTGTATGAGGACACTGTTGATGTTGCCAAAGAACAAATTCGATCCATAAATCCCTCAGCTTTTGATCAAAAAATTGT
AAGAGGAGCATGCAACTGCATTGAGTCATCCTGTCAAAAACTTGATTGTCCATGCTTGCGGGCAGGAGTTCCTTGCATTGAAGCATGTCATTGTCAAATTTGTTGTAATC
CTTATGGCGAAAGTCCAGATCAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATAATCACTCCAAGATCATCAATTTCCAAACTCAAAATATTTGTTCTGAGGTGTCTGTTGAGAAGAAAAATGATGGTGTTAAATATCATAACAAAAATAAGAA
AGAAAATAATAACTTAAGAAATCATCAAAAACAGATGTCTTCGAGAGGCTCCCTGAATGACATGAATTACAATAGGCCTACCACTAACACAAAAAGAAAGAGAAAGAGCG
ACAATGCAAAAAAGGCGAGCCCATGTTGCCATTGCAAAGACAATGGCACCGAGTGTCTAACACCTGATTGCGAATGCTTTGCAAGAGAAATGTTTTGCTGCGAAGAATGT
GGGTGTGATCATGAAGACTGCTTCAACACTCCTTTGTATGAGGACACTGTTGATGTTGCCAAAGAACAAATTCGATCCATAAATCCCTCAGCTTTTGATCAAAAAATTGT
AAGAGGAGCATGCAACTGCATTGAGTCATCCTGTCAAAAACTTGATTGTCCATGCTTGCGGGCAGGAGTTCCTTGCATTGAAGCATGTCATTGTCAAATTTGTTGTAATC
CTTATGGCGAAAGTCCAGATCAAAGATGA
Protein sequenceShow/hide protein sequence
MDDNHSKIINFQTQNICSEVSVEKKNDGVKYHNKNKKENNNLRNHQKQMSSRGSLNDMNYNRPTTNTKRKRKSDNAKKASPCCHCKDNGTECLTPDCECFAREMFCCEEC
GCDHEDCFNTPLYEDTVDVAKEQIRSINPSAFDQKIVRGACNCIESSCQKLDCPCLRAGVPCIEACHCQICCNPYGESPDQR