; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G1670 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1670
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat superfamily protein
Genome locationctg1000:1599021..1604536
RNA-Seq ExpressionCucsat.G1670
SyntenyCucsat.G1670
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143391.2 putative pentatricopeptide repeat-containing protein At5g37570 [Cucumis sativus]4.38e-182100Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

XP_008462604.1 PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 [Cucumis melo]9.74e-17496.06Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYAT C VDLRGAHV AALIDMNAKCGNMERAMYLFE+MPKRDLISYCSVMQGLSIHGHGDQAVSLF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERML EDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMR KYSMVPS+DHYACIVDLLSRSGRLKEAYELIKS+PVQSHAGAWGALLGACKLYCDSELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVASRLIE+EPENAGNYVLLSNIYAAADRWLDVSAVR+QMNERGLRKIPGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

XP_022132921.1 putative pentatricopeptide repeat-containing protein At5g37570 [Momordica charantia]2.48e-15987.8Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M  RNVKPD+FVL SLM ACSQ+GNLDLAKWVDSYAT+  +DLRGAHV AALIDMNAKCGNMERAM LF++MPKRDLISYCS+MQGLSIHG GDQAVSLF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERML E LTPD+VAFTVILTACSRAG VDEGWHYFE MR KYSM+PS DHYACIVDLLSRSGRLK AYELIKSVPVQSHAGAWGALLGACKLYC+SELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVASRLIE+EP+NAGNYVLLSNIYAAA+RWLDVS VRNQMNERG+RKIPGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

XP_022962851.1 putative pentatricopeptide repeat-containing protein At5g37570 [Cucurbita moschata]2.52e-15988.19Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M SRNVKPD+FVL SLM ACSQ+GNLDLAKWVDSYA++C VDLRGAHV AALIDMNAKCGNMERAM LFE+MPKRDLISYCSVMQGLS+HG GDQAVSLF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERMLGE LTPD+VAFTVILTACSRAGLVDEGWHYFE+MR KYSMVPS DHYACIVDLLSRSGRLK AYELIKSVP QSHAGAWGALLGACKLY DSELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVASRL+E+EP+NA NYVLLSNIYA+A+RWLDVS VRNQM+ERG+RKIPGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

XP_038882068.1 putative pentatricopeptide repeat-containing protein At5g37570 [Benincasa hispida]1.62e-16289.76Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M S NVKPD+FVL SLM ACSQ+GNLDLAKWVDSYATRC  DLRGAHV AALIDMNAKCGNMERAM LFE+MPKRDLISYCSVMQGLSIHGHGDQ V LF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERML EDLTPD+VAFTVILTACSRAGLVDEGWHYFE+MR KYSMVPS DHYACI+DLLSRSGRLK AYELIKSVPVQSH GAWGALLGACKLYCDSELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVASRLIE+EP+NAGNYVLLSNIYAAA+RWLDV+ VRNQMNERGLRKIPGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

TrEMBL top hitse value%identityAlignment
A0A0A0KKK4 Uncharacterized protein1.69e-16699.16Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRN
        VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSA  N
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRN

A0A1S3CHC2 putative pentatricopeptide repeat-containing protein At5g375704.71e-17496.06Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYAT C VDLRGAHV AALIDMNAKCGNMERAMYLFE+MPKRDLISYCSVMQGLSIHGHGDQAVSLF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERML EDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMR KYSMVPS+DHYACIVDLLSRSGRLKEAYELIKS+PVQSHAGAWGALLGACKLYCDSELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVASRLIE+EPENAGNYVLLSNIYAAADRWLDVSAVR+QMNERGLRKIPGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

A0A5A7SLV1 Putative pentatricopeptide repeat-containing protein4.71e-17496.06Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYAT C VDLRGAHV AALIDMNAKCGNMERAMYLFE+MPKRDLISYCSVMQGLSIHGHGDQAVSLF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERML EDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMR KYSMVPS+DHYACIVDLLSRSGRLKEAYELIKS+PVQSHAGAWGALLGACKLYCDSELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVASRLIE+EPENAGNYVLLSNIYAAADRWLDVSAVR+QMNERGLRKIPGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

A0A6J1BTM3 putative pentatricopeptide repeat-containing protein At5g375701.20e-15987.8Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M  RNVKPD+FVL SLM ACSQ+GNLDLAKWVDSYAT+  +DLRGAHV AALIDMNAKCGNMERAM LF++MPKRDLISYCS+MQGLSIHG GDQAVSLF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERML E LTPD+VAFTVILTACSRAG VDEGWHYFE MR KYSM+PS DHYACIVDLLSRSGRLK AYELIKSVPVQSHAGAWGALLGACKLYC+SELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVASRLIE+EP+NAGNYVLLSNIYAAA+RWLDVS VRNQMNERG+RKIPGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

A0A6J1HI92 putative pentatricopeptide repeat-containing protein At5g375701.22e-15988.19Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M SRNVKPD+FVL SLM ACSQ+GNLDLAKWVDSYA++C VDLRGAHV AALIDMNAKCGNMERAM LFE+MPKRDLISYCSVMQGLS+HG GDQAVSLF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        ERMLGE LTPD+VAFTVILTACSRAGLVDEGWHYFE+MR KYSMVPS DHYACIVDLLSRSGRLK AYELIKSVP QSHAGAWGALLGACKLY DSELAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVASRL+E+EP+NA NYVLLSNIYA+A+RWLDVS VRNQM+ERG+RKIPGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

SwissProt top hitse value%identityAlignment
A8MQA3 Pentatricopeptide repeat-containing protein At4g210653.7e-6042.35Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M+S+ +KPD F + SL+ AC+++G L L K V  Y  +  +  R  H +  L+D+ A+CG +E A  LF++M  ++ +S+ S++ GL+++G G +A+ LF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLG-EDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELA
        + M   E L P ++ F  IL ACS  G+V EG+ YF  MR +Y + P ++H+ C+VDLL+R+G++K+AYE IKS+P+Q +   W  LLGAC ++ DS+LA
Subjt:  ERMLG-EDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELA

Query:  EVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        E    +++++EP ++G+YVLLSN+YA+  RW DV  +R QM   G++K+PG S +
Subjt:  EVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic1.3e-6043.43Show/hide
Query:  RNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERM
        +N+K ++  L S + AC+Q+G L+L +W+ SY  +  + +   HVT+ALI M +KCG++E++  +F  + KRD+  + +++ GL++HG G++AV +F +M
Subjt:  RNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERM

Query:  LGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVA
           ++ P+ V FT +  ACS  GLVDE    F  M   Y +VP   HYACIVD+L RSG L++A + I+++P+      WGALLGACK++ +  LAE+  
Subjt:  LGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVA

Query:  SRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        +RL+E+EP N G +VLLSNIYA   +W +VS +R  M   GL+K PGCS I
Subjt:  SRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

Q9FHR3 Putative pentatricopeptide repeat-containing protein At5g375709.3e-8859.06Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M ++NVKPD+F++  LM ACSQ+G  +L + VDSY  +        +V  ALIDMNAKCG+M+RA  LFE+MP+RDL+SYCS+M+G++IHG G +A+ LF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        E+M+ E + PD+VAFTVIL  C ++ LV+EG  YFE+MR KYS++ S DHY+CIV+LLSR+G+LKEAYELIKS+P ++HA AWG+LLG C L+ ++E+AE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVA  L E+EP++AG+YVLLSNIYAA DRW DV+ +R++MNE G+ KI G SWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

Q9LNU6 Pentatricopeptide repeat-containing protein At1g202302.5e-6444.09Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M    VKP+   + S++ AC  +  L   +    +A R  + L   HV +ALIDM AKCG +  +  +F  MP ++L+ + S+M G S+HG   + +S+F
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        E ++   L PD ++FT +L+AC + GL DEGW YF+MM  +Y + P ++HY+C+V+LL R+G+L+EAY+LIK +P +  +  WGALL +C+L  + +LAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        + A +L  +EPEN G YVLLSNIYAA   W +V ++RN+M   GL+K PGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

Q9LS72 Pentatricopeptide repeat-containing protein At3g292301.1e-5942.46Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M +  +K D   + S++ AC++ G L L   + S   R ++    A+V  AL+DM AKCGN+++A  +F  +PK+DL+S+ +++ GL +HGHG +A+ LF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
         RM  E + PD V F  +L +C+ AGL+DEG  YF  M   Y +VP V+HY C+VDLL R GRLKEA ++++++P++ +   WGALLGAC+++ + ++A+
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCS
         V   L++++P + GNY LLSNIYAAA+ W  V+ +R++M   G+ K  G S
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCS

Arabidopsis top hitse value%identityAlignment
AT1G20230.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-6544.09Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M    VKP+   + S++ AC  +  L   +    +A R  + L   HV +ALIDM AKCG +  +  +F  MP ++L+ + S+M G S+HG   + +S+F
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        E ++   L PD ++FT +L+AC + GL DEGW YF+MM  +Y + P ++HY+C+V+LL R+G+L+EAY+LIK +P +  +  WGALL +C+L  + +LAE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        + A +L  +EPEN G YVLLSNIYAA   W +V ++RN+M   GL+K PGCSWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.0e-6243.43Show/hide
Query:  RNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERM
        +N+K ++  L S + AC+Q+G L+L +W+ SY  +  + +   HVT+ALI M +KCG++E++  +F  + KRD+  + +++ GL++HG G++AV +F +M
Subjt:  RNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERM

Query:  LGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVA
           ++ P+ V FT +  ACS  GLVDE    F  M   Y +VP   HYACIVD+L RSG L++A + I+++P+      WGALLGACK++ +  LAE+  
Subjt:  LGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVA

Query:  SRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        +RL+E+EP N G +VLLSNIYA   +W +VS +R  M   GL+K PGCS I
Subjt:  SRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.6e-6142.35Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M+S+ +KPD F + SL+ AC+++G L L K V  Y  +  +  R  H +  L+D+ A+CG +E A  LF++M  ++ +S+ S++ GL+++G G +A+ LF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLG-EDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELA
        + M   E L P ++ F  IL ACS  G+V EG+ YF  MR +Y + P ++H+ C+VDLL+R+G++K+AYE IKS+P+Q +   W  LLGAC ++ DS+LA
Subjt:  ERMLG-EDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELA

Query:  EVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        E    +++++EP ++G+YVLLSN+YA+  RW DV  +R QM   G++K+PG S +
Subjt:  EVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

AT4G21065.2 Tetratricopeptide repeat (TPR)-like superfamily protein2.6e-6142.35Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M+S+ +KPD F + SL+ AC+++G L L K V  Y  +  +  R  H +  L+D+ A+CG +E A  LF++M  ++ +S+ S++ GL+++G G +A+ LF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLG-EDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELA
        + M   E L P ++ F  IL ACS  G+V EG+ YF  MR +Y + P ++H+ C+VDLL+R+G++K+AYE IKS+P+Q +   W  LLGAC ++ DS+LA
Subjt:  ERMLG-EDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELA

Query:  EVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        E    +++++EP ++G+YVLLSN+YA+  RW DV  +R QM   G++K+PG S +
Subjt:  EVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI

AT5G37570.1 Pentatricopeptide repeat (PPR-like) superfamily protein6.6e-8959.06Show/hide
Query:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF
        M ++NVKPD+F++  LM ACSQ+G  +L + VDSY  +        +V  ALIDMNAKCG+M+RA  LFE+MP+RDL+SYCS+M+G++IHG G +A+ LF
Subjt:  MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLF

Query:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE
        E+M+ E + PD+VAFTVIL  C ++ LV+EG  YFE+MR KYS++ S DHY+CIV+LLSR+G+LKEAYELIKS+P ++HA AWG+LLG C L+ ++E+AE
Subjt:  ERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAE

Query:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI
        VVA  L E+EP++AG+YVLLSNIYAA DRW DV+ +R++MNE G+ KI G SWI
Subjt:  VVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTAGGAATGTGAAACCTGATAAGTTTGTATTGACAAGCTTAATGTTAGCTTGTTCTCAGTTGGGTAATTTGGATTTGGCCAAATGGGTTGACTCATATGCTAC
CAGGTGTTCAGTTGATCTACGCGGGGCACACGTTACGGCCGCTCTTATAGACATGAATGCTAAGTGTGGAAACATGGAGCGAGCCATGTATCTGTTCGAAAAAATGCCTA
AAAGGGACCTAATCTCCTATTGTTCTGTAATGCAAGGTTTGTCAATCCACGGGCATGGAGATCAAGCTGTGTCACTCTTTGAGAGGATGCTAGGTGAAGATCTAACCCCC
GATGACGTGGCCTTCACAGTCATTTTAACAGCTTGCAGCCGTGCTGGACTTGTAGATGAAGGCTGGCATTACTTTGAAATGATGAGGTGTAAATACTCCATGGTTCCCTC
TGTTGATCACTATGCATGTATTGTTGATCTTCTTAGTCGATCTGGGAGGCTAAAAGAAGCTTATGAGCTCATAAAATCCGTACCTGTTCAATCTCATGCTGGTGCATGGG
GTGCACTGCTTGGGGCCTGCAAATTATATTGCGACTCTGAGCTTGCAGAGGTGGTAGCTTCTCGACTTATTGAGATTGAGCCTGAAAATGCTGGCAATTATGTGCTATTA
TCCAATATCTATGCTGCAGCAGATAGGTGGCTGGATGTGTCTGCTGTAAGAAACCAAATGAATGAAAGAGGGCTTAGAAAAATACCCGGTTGCAGTTGGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCTAGGAATGTGAAACCTGATAAGTTTGTATTGACAAGCTTAATGTTAGCTTGTTCTCAGTTGGGTAATTTGGATTTGGCCAAATGGGTTGACTCATATGCTAC
CAGGTGTTCAGTTGATCTACGCGGGGCACACGTTACGGCCGCTCTTATAGACATGAATGCTAAGTGTGGAAACATGGAGCGAGCCATGTATCTGTTCGAAAAAATGCCTA
AAAGGGACCTAATCTCCTATTGTTCTGTAATGCAAGGTTTGTCAATCCACGGGCATGGAGATCAAGCTGTGTCACTCTTTGAGAGGATGCTAGGTGAAGATCTAACCCCC
GATGACGTGGCCTTCACAGTCATTTTAACAGCTTGCAGCCGTGCTGGACTTGTAGATGAAGGCTGGCATTACTTTGAAATGATGAGGTGTAAATACTCCATGGTTCCCTC
TGTTGATCACTATGCATGTATTGTTGATCTTCTTAGTCGATCTGGGAGGCTAAAAGAAGCTTATGAGCTCATAAAATCCGTACCTGTTCAATCTCATGCTGGTGCATGGG
GTGCACTGCTTGGGGCCTGCAAATTATATTGCGACTCTGAGCTTGCAGAGGTGGTAGCTTCTCGACTTATTGAGATTGAGCCTGAAAATGCTGGCAATTATGTGCTATTA
TCCAATATCTATGCTGCAGCAGATAGGTGGCTGGATGTGTCTGCTGTAAGAAACCAAATGAATGAAAGAGGGCTTAGAAAAATACCCGGTTGCAGTTGGATTTAA
Protein sequenceShow/hide protein sequence
MSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTP
DDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYVLL
SNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI