; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G16784 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16784
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionnuclear transport factor 2-like
Genome locationctg24:1105050..1107567
RNA-Seq ExpressionCucsat.G16784
SyntenyCucsat.G16784
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53044.1 hypothetical protein Csa_014783 [Cucumis sativus]1.34e-12299.42Show/hide
Query:  MELTLPLLEPSANAVVSICFSPKPGVVPKHGGTYCLSLTSLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVA
        MELTLPLLEPSANAVVSICFSPKPGVVPKHGGTY LSLTSLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVA
Subjt:  MELTLPLLEPSANAVVSICFSPKPGVVPKHGGTYCLSLTSLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVA

Query:  KLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA
        KLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA
Subjt:  KLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA

XP_004152114.2 nuclear transport factor 2B [Cucumis sativus]1.29e-84100Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSFFVQNDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

XP_022979987.1 nuclear transport factor 2B [Cucurbita maxima]3.39e-8095.12Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFDANRA L NLYQDNSMLTFEGQKIQGSPNIVAKL+SLPFQQC+HSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

XP_023526029.1 nuclear transport factor 2B [Cucurbita pepo subsp. pepo]2.78e-7994.31Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFDANRA L NLYQD SMLTFEGQKIQGSPNIVAKL+SLPFQQC+HSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

XP_038895512.1 nuclear transport factor 2B [Benincasa hispida]3.95e-7992.68Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFD NRANL NLYQDNSMLTFEGQKIQGSP+IVAKLS LPFQQCKH+++TVDCQPSGP GGMLVFVSG+LQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSFFVQNDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

TrEMBL top hitse value%identityAlignment
A0A0A0KW20 NTF2 domain-containing protein6.47e-12399.42Show/hide
Query:  MELTLPLLEPSANAVVSICFSPKPGVVPKHGGTYCLSLTSLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVA
        MELTLPLLEPSANAVVSICFSPKPGVVPKHGGTY LSLTSLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVA
Subjt:  MELTLPLLEPSANAVVSICFSPKPGVVPKHGGTYCLSLTSLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVA

Query:  KLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA
        KLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA
Subjt:  KLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA

A0A1S3BXM4 nuclear transport factor 2-like7.79e-7991.87Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPD +AKAFVDHYYSTFDANRA LGNLYQ+NSMLTFEGQKIQGS NIVAKL+SLPFQQCKH+VST+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSFFVQNDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

A0A6J1GVJ2 nuclear transport factor 2B5.48e-7993.5Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFDANRA L NLYQD SMLTFEGQKIQGSPNIVAKL+SLPFQQC+HSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHL+PTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

A0A6J1IQ79 nuclear transport factor 2B1.64e-8095.12Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFDANRA L NLYQDNSMLTFEGQKIQGSPNIVAKL+SLPFQQC+HSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

A5BM29 NTF2 domain-containing protein4.50e-7891.06Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANRANL NLYQ++SMLTFEGQKIQGSPNIVAKL+SLPFQQC+HS++TVDCQPSGP GGMLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

SwissProt top hitse value%identityAlignment
Q6FRC6 Nuclear transport factor 21.2e-3051.22Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MD +A+A+ F + YY+ FD++R+ LGNLY+D SMLTFE  ++QG+ +IV KL SLPFQ+  H ++T+D QP+ P G +LV ++G+L +  EQ+  +FSQ+
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHL+P    S++V NDIFRLNY+
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

Q75AA5 Nuclear transport factor 21.1e-3152.85Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MD  A+A+ F + YY+ FD +R+ LGNLY+D SMLTFE  ++QG+ +IV KL SLPFQ+ +H ++T+D QP+ P G +LV ++G+L +  EQ+A +FSQ+
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMP    S++V NDIFRLNY+
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

Q9C7F5 Nuclear transport factor 2B2.9e-5681.75Show/hide
Query:  LTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKF
        +++MDPDAV+KAFV+HYYSTFD NR  L  LYQ+ SMLTFEGQKIQG  +IVAKL+SLPFQQCKH +STVDCQPSGP  GMLVFVSGNLQLAGE+HALKF
Subjt:  LTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKF

Query:  SQMFHLMPTPQGSFFVQNDIFRLNYA
        SQMFHLMPTPQGSF+V NDIFRLNYA
Subjt:  SQMFHLMPTPQGSFFVQNDIFRLNYA

Q9FZK4 Nuclear transport factor 2A3.0e-5382.11Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR  L +LYQ+ SMLTFEGQKIQGS NIVAKL+ LPFQQCKH+++TVDCQPSGP GGMLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHL+ + QG+++V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

Q9XJ54 Nuclear transport factor 21.2e-4167.21Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MD DAVAKAFV+HYY TFD NR  L +LYQD SMLTFEGQ+  G+  I  KL SLPF QC H ++TVDCQPSGP GGMLVFVSG+L+   ++H LKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNY
        F L+P   G+F+VQND+FRLNY
Subjt:  FHLMPTPQGSFFVQNDIFRLNY

Arabidopsis top hitse value%identityAlignment
AT1G11570.1 NTF2-like1.9e-2657.28Show/hide
Query:  DAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPS---GPTGGMLVFVSGNLQLAGEQHALKFSQM
        + VA AFV+HYY  FD +R++L +LY   S+LTFEGQ I G  NI  KL  LPF QC H +STVD QPS   G  GG+LVFVSG++QL GE H L+FSQ+
Subjt:  DAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPS---GPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHL
        + L
Subjt:  FHL

AT1G11570.2 NTF2-like5.2e-3761.48Show/hide
Query:  DAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPS---GPTGGMLVFVSGNLQLAGEQHALKFSQM
        + VA AFV+HYY  FD +R++L +LY   S+LTFEGQ I G  NI  KL  LPF QC H +STVD QPS   G  GG+LVFVSG++QL GE H L+FSQ 
Subjt:  DAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPS---GPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNY
        FHL+P  QGSFFVQN++FRLNY
Subjt:  FHLMPTPQGSFFVQNDIFRLNY

AT1G27310.1 nuclear transport factor 2A2.1e-5482.11Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR  L +LYQ+ SMLTFEGQKIQGS NIVAKL+ LPFQQCKH+++TVDCQPSGP GGMLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHL+ + QG+++V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

AT1G27970.1 nuclear transport factor 2B2.0e-5781.75Show/hide
Query:  LTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKF
        +++MDPDAV+KAFV+HYYSTFD NR  L  LYQ+ SMLTFEGQKIQG  +IVAKL+SLPFQQCKH +STVDCQPSGP  GMLVFVSGNLQLAGE+HALKF
Subjt:  LTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKF

Query:  SQMFHLMPTPQGSFFVQNDIFRLNYA
        SQMFHLMPTPQGSF+V NDIFRLNYA
Subjt:  SQMFHLMPTPQGSFFVQNDIFRLNYA

AT1G27970.2 nuclear transport factor 2B2.7e-5480.99Show/hide
Query:  LTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKF
        +++MDPDAV+KAFV+HYYSTFD NR  L  LYQ+ SMLTFEGQKIQG  +IVAKL+SLPFQQCKH +STVDCQPSGP  GMLVFVSGNLQLAGE+HALKF
Subjt:  LTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKF

Query:  SQMFHLMPTPQGSFFVQNDIF
        SQMFHLMPTPQGSF+V NDIF
Subjt:  SQMFHLMPTPQGSFFVQNDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTAACCCTCCCTCTTCTCGAACCCTCGGCTAACGCTGTCGTCTCCATTTGTTTCTCTCCTAAACCCGGCGTCGTTCCCAAGCACGGCGGAACTTATTGCCTCTC
TCTTACCTCTCTCACACCGCCCAATTTCAACCTCACCCGAATGGATCCCGACGCGGTAGCTAAAGCATTCGTCGATCATTATTACTCCACTTTCGATGCCAATCGAGCCA
ATCTTGGTAATCTCTACCAAGACAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCTCACCTAATATCGTCGCCAAGCTCTCTAGTCTACCCTTCCAGCAGTGC
AAGCACTCCGTTAGCACCGTTGATTGCCAGCCTTCTGGTCCTACTGGTGGCATGCTTGTCTTCGTCAGCGGCAATCTTCAACTCGCTGGTGAACAACACGCTCTCAAATT
CAGTCAGATGTTCCATTTGATGCCAACCCCACAAGGAAGCTTCTTTGTGCAGAACGACATTTTCCGATTGAACTATGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTAACCCTCCCTCTTCTCGAACCCTCGGCTAACGCTGTCGTCTCCATTTGTTTCTCTCCTAAACCCGGCGTCGTTCCCAAGCACGGCGGAACTTATTGCCTCTC
TCTTACCTCTCTCACACCGCCCAATTTCAACCTCACCCGAATGGATCCCGACGCGGTAGCTAAAGCATTCGTCGATCATTATTACTCCACTTTCGATGCCAATCGAGCCA
ATCTTGGTAATCTCTACCAAGACAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCTCACCTAATATCGTCGCCAAGCTCTCTAGTCTACCCTTCCAGCAGTGC
AAGCACTCCGTTAGCACCGTTGATTGCCAGCCTTCTGGTCCTACTGGTGGCATGCTTGTCTTCGTCAGCGGCAATCTTCAACTCGCTGGTGAACAACACGCTCTCAAATT
CAGTCAGATGTTCCATTTGATGCCAACCCCACAAGGAAGCTTCTTTGTGCAGAACGACATTTTCCGATTGAACTATGCCTGA
Protein sequenceShow/hide protein sequence
MELTLPLLEPSANAVVSICFSPKPGVVPKHGGTYCLSLTSLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQC
KHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA