CuGenDBv2

Gene ID	Cucsat.G16807
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Peroxin-13
Genome location	ctg24:1395146..1398296
RNA-Seq Expression	Cucsat.G16807
Synteny	Cucsat.G16807
Gene Ontology terms	GO:0016560 - protein import into peroxisome matrix, docking (biological process) GO:0005778 - peroxisomal membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:1990429 - peroxisomal importomer complex (cellular component)
InterPro domains	IPR035463 - Peroxin 13

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044529.1 peroxisomal membrane protein 13 [Cucumis melo var. makuwa]

3.67e-123

95.88

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
        MYGSSSYGGGMYGGGMYGNS MYRSGG  GGLYGSSGMYGNSGMYGGGMYNSG GGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN

Query:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGS
        FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV+GPDGLP+PGAPHPHQ QNLIEGPK APDGAWDNVWPNGS
Subjt:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGS

XP_004152142.1 peroxisomal membrane protein 13 [Cucumis sativus]

1.49e-133

100

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
        MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN

Query:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
        FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
Subjt:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ

XP_016901552.1 PREDICTED: LOW QUALITY PROTEIN: peroxisomal membrane protein 13 [Cucumis melo]

5.42e-124

95.38

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
        MYGSSSYGGGMYGGGMYGNS MYRSGG  GGLYGSSGMYGNSGMYGGGMYNSG GGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN

Query:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
        FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV+GPDGLP+PG PHPHQ QNLIEGPK APDGAWDNVWPNGSQ
Subjt:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ

XP_023528237.1 peroxisomal membrane protein 13 [Cucurbita pepo subsp. pepo]

1.99e-115

91.41

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSG-FGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVV
        MYGSSSYGGGMYGGGMYGN+SMYR GGYGG LYGSSGMYG+SGMYGGGMYNSG  GGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVV
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSG-FGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVV

Query:  NFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
        NFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV  +GPDGLP+PGAPHPHQ QN IEGPK +PD  WDNVW NGSQ
Subjt:  NFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ

XP_038877301.1 peroxisomal membrane protein 13 [Benincasa hispida]

1.36e-122

94.42

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
        MYGSS YGGGMYGGGMYGN+SMYR+GGYGG LYGSSGMYGNSGMYGGGMYNSG GGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN

Query:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
        FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV  +GPDGLP+PGAPHPHQ QNLIEGPK APDGAWDNVWPNGSQ
Subjt:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYV0 Peroxin-13

7.22e-134

100

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
        MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN

Query:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
        FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
Subjt:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ

A0A1S4DZY4 Peroxin-13

2.62e-124

95.38

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
        MYGSSSYGGGMYGGGMYGNS MYRSGG  GGLYGSSGMYGNSGMYGGGMYNSG GGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN

Query:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
        FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV+GPDGLP+PG PHPHQ QNLIEGPK APDGAWDNVWPNGSQ
Subjt:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ

A0A5D3D1F0 Peroxin-13

1.78e-123

95.88

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
        MYGSSSYGGGMYGGGMYGNS MYRSGG  GGLYGSSGMYGNSGMYGGGMYNSG GGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVN

Query:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGS
        FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV+GPDGLP+PGAPHPHQ QNLIEGPK APDGAWDNVWPNGS
Subjt:  FFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGS

A0A6J1GV89 Peroxin-13

3.92e-115

90.91

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSG-FGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVV
        MYGSSSYGGGMYGGGMYGN+SMYR GGYGG LYGSSGMYG+ GMYGGGMYNSG  GGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVV
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSG-FGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVV

Query:  NFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
        NFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV  +GPDGLP+PGAPHPHQ QN IEGPK +PD  WDNVW NGSQ
Subjt:  NFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ

A0A6J1IW92 Peroxin-13

3.92e-115

90.91

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Query:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSG-FGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVV
        MYGSSSYGGGMYGGGMYGN+SMYR GGYGG LYGSSGMYG+ GMYGGGMYNSG  GGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVV
Subjt:  MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSG-FGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVV

Query:  NFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
        NFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV  +GPDGLP+PGAPHPHQ QN IEGPK +PD  WDNVW NGSQ
Subjt:  NFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ

SwissProt top hits

e value

%identity

Alignment

Q54CL3 Probable peroxisomal membrane protein PEX13

5.8e-05

41.35

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Query:  YGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPM-----GGYGMGMGGPYG--GQDPNDPYGPP-SSPPGFWMSFLR
        YGSS YGGG Y  G YG S       YGGG YGSS   G    YGG  Y S +GG       GGYG G GG YG  G D  D  G    S      S++ 
Subjt:  YGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPM-----GGYGMGMGGPYG--GQDPNDPYGPP-SSPPGFWMSFLR

Query:  VMHGVVNFFGRISILIDQNTQAFHMFMTALLQL
         +H +V+ F R S L+D N  A H   +++++L
Subjt:  VMHGVVNFFGRISILIDQNTQAFHMFMTALLQL

Q9SRR0 Peroxisomal membrane protein 13

1.1e-61

66.51

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Query:  YGSSSYG------GGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGM--YGG--GMYNSGFGGPMG-GYGMGMGGPYGGQDPNDPYGPPSSPPGFWMS
        YGS +YG      G  YGGGMYG SSMYR G  GGGLYGSSGMYG   M  YGG  G Y  G G  MG G GMGMGGPYG QDPNDP+  P SPPGFW+S
Subjt:  YGSSSYG------GGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGM--YGG--GMYNSGFGGPMG-GYGMGMGGPYGGQDPNDPYGPPSSPPGFWMS

Query:  FLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV----LGPDGLPIPGAPHPHQSQNLIEGPK---PAPD
        FLRVM G VNFFGR+++LIDQNTQAFHMFM+ALLQLFDR GMLYGELARFVLR+LG++T+PRK+     GP+GLP+P    PH +QN +EGPK   P   
Subjt:  FLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV----LGPDGLPIPGAPHPHQSQNLIEGPK---PAPD

Query:  GAWDNVWPN
        G WDNVW N
Subjt:  GAWDNVWPN

Arabidopsis top hits

e value

%identity

Alignment

AT3G07560.1 peroxin 13

8.1e-63

66.51

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Query:  YGSSSYG------GGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGM--YGG--GMYNSGFGGPMG-GYGMGMGGPYGGQDPNDPYGPPSSPPGFWMS
        YGS +YG      G  YGGGMYG SSMYR G  GGGLYGSSGMYG   M  YGG  G Y  G G  MG G GMGMGGPYG QDPNDP+  P SPPGFW+S
Subjt:  YGSSSYG------GGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGM--YGG--GMYNSGFGGPMG-GYGMGMGGPYGGQDPNDPYGPPSSPPGFWMS

Query:  FLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV----LGPDGLPIPGAPHPHQSQNLIEGPK---PAPD
        FLRVM G VNFFGR+++LIDQNTQAFHMFM+ALLQLFDR GMLYGELARFVLR+LG++T+PRK+     GP+GLP+P    PH +QN +EGPK   P   
Subjt:  FLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKV----LGPDGLPIPGAPHPHQSQNLIEGPK---PAPD

Query:  GAWDNVWPN
        G WDNVW N
Subjt:  GAWDNVWPN

Sequences

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CDS sequence

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ATGTATGGTTCTTCTTCTTATGGTGGGGGAATGTATGGGGGTGGAATGTATGGGAACAGCAGCATGTATAGATCAGGAGGTTATGGTGGTGGGCTTTACGGATCTTCTGG
TATGTATGGAAATAGTGGTATGTATGGAGGTGGAATGTATAATAGTGGCTTTGGAGGTCCAATGGGTGGCTATGGAATGGGCATGGGTGGTCCTTATGGTGGTCAAGATC
CAAATGATCCTTATGGTCCTCCCTCATCTCCTCCGGGATTTTGGATGTCATTTCTGCGAGTGATGCATGGTGTTGTGAACTTCTTTGGTCGAATATCCATTCTTATTGAC
CAAAACACACAGGCGTTTCATATGTTCATGACTGCACTACTTCAGCTTTTTGATCGCTCCGGTATGTTGTATGGAGAGCTTGCTAGATTTGTCTTGAGGCTGCTTGGAAT
CAAAACCAAACCTAGGAAGGTTCTAGGCCCAGATGGGCTTCCAATTCCTGGAGCCCCCCATCCTCATCAAAGCCAGAACTTGATCGAAGGACCAAAACCTGCTCCTGATG
GCGCTTGGGATAATGTTTGGCCAAATGGTTCCCAGTAA

mRNA sequence

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Protein sequence

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MYGSSSYGGGMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILID
QNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ

Cucsat.G16807 (gene) of Cucumber (B10) v3 genome