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Cucsat.G16829 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16829
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description50S ribosomal protein L18
Genome locationctg24:1741913..1743799
RNA-Seq ExpressionCucsat.G16829
SyntenyCucsat.G16829
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06187.1 50S ribosomal protein L18 [Cucumis melo var. makuwa]1.42e-8096.12Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
XP_011653002.1 uncharacterized protein LOC101206481 [Cucumis sativus]5.17e-8399.22Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVNSLKNNGVKLILDNNVDD+AAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
XP_016902998.1 PREDICTED: uncharacterized protein LOC103501501 [Cucumis melo]8.24e-8095.35Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVNSLKNNGVKLIL+NNVDDDAAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
XP_022943852.1 uncharacterized protein LOC111448460 [Cucurbita moschata]4.09e-7388.37Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYV+RLF+SLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VGEVLAMRLKVDGLEQGQGRGIH DI KEIEKKGFKN TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVNSLKNNGVKLILDNN DDDA++ +Y+
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
XP_038901007.1 uncharacterized protein LOC120088052 [Benincasa hispida]8.60e-7589.92Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VGEVLAMRLKVDGLEQGQGRGIHAD+ KEIEKKGFKN TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVN+LKNNGVKLILDNNVDD A++S+YQ
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
TrEMBL top hitse value%identityAlignment
A0A0A0KX15 Uncharacterized protein5.30e-8299.22Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVNSLKNNGVKLILDNNVDD+AAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
A0A1S4E442 uncharacterized protein LOC1035015013.99e-8095.35Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVNSLKNNGVKLIL+NNVDDDAAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
A0A5A7SM55 50S ribosomal protein L183.99e-8095.35Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVNSLKNNGVKLIL+NNVDDDAAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
A0A5D3C2Z2 50S ribosomal protein L186.90e-8196.12Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
A0A6J1FXG0 uncharacterized protein LOC1114484601.98e-7388.37Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYV+RLF+SLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VGEVLAMRLKVDGLEQGQGRGIH DI KEIEKKGFKN TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
        AIVNSLKNNGVKLILDNN DDDA++ +Y+
Subjt:  AIVNSLKNNGVKLILDNNVDDDAAQSNYQ
SwissProt top hitse value%identityAlignment
A1KRI9 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
A9M3V0 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
Q5F5U3 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
Q7DDT0 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
Q9JQQ6 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
Arabidopsis top hitse value%identityAlignment
AT3G45020.1 Ribosomal L18p/L5e family protein4.6e-5482.79Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+S+KYITANVVDRNNGR+V TASTVEH+IKNSLECGR+CNAKAAAIVGEVLAMRLKV+GL+ GQGRGIHAD+KKEIEKKGFK+ TK+W
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDD
        A++NSL+NNGV LILD++ DDD
Subjt:  AIVNSLKNNGVKLILDNNVDDD
AT5G27820.1 Ribosomal L18p/L5e family protein8.7e-0527.03Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK YVL++  + K++ A V+      V  +AS+ E +++ +++  R  +  AA+ +G++L  RL +  +       +   +KKE      + H K+ A++
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGVKLI
        +S++  GVKL+
Subjt:  NSLKNNGVKLI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCTATTAAAGCGCTATGTGTTGCGATTATTCTTATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAACAATGGACGAGTCGTTGCAACTGCATCCACAGT
GGAACACTCCATAAAAAACTCACTTGAATGTGGCCGGTCTTGTAATGCTAAGGCAGCAGCAATTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGATGGTCTCGAAC
AGGGGCAAGGAAGAGGGATTCACGCAGACATAAAAAAAGAAATTGAGAAGAAAGGCTTCAAAAACCACACAAAAATCTGGGCTATAGTGAACTCACTAAAGAATAACGGA
GTTAAACTCATTCTCGACAACAATGTCGACGACGATGCAGCTCAATCGAACTATCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGCTATTAAAGCGCTATGTGTTGCGATTATTCTTATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAACAATGGACGAGTCGTTGCAACTGCATCCACAGT
GGAACACTCCATAAAAAACTCACTTGAATGTGGCCGGTCTTGTAATGCTAAGGCAGCAGCAATTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGATGGTCTCGAAC
AGGGGCAAGGAAGAGGGATTCACGCAGACATAAAAAAAGAAATTGAGAAGAAAGGCTTCAAAAACCACACAAAAATCTGGGCTATAGTGAACTCACTAAAGAATAACGGA
GTTAAACTCATTCTCGACAACAATGTCGACGACGATGCAGCTCAATCGAACTATCAATAA
Protein sequenceShow/hide protein sequence
MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNG
VKLILDNNVDDDAAQSNYQ