; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G16858 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16858
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTATA-binding protein-associated factor 2N-like
Genome locationctg24:2192113..2194081
RNA-Seq ExpressionCucsat.G16858
SyntenyCucsat.G16858
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52873.1 hypothetical protein Csa_014917 [Cucumis sativus]4.72e-112100Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

XP_008454250.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like [Cucumis melo]7.54e-10997.26Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGG+GRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPR SPRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AF SPAR AASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

XP_022955940.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita moschata]2.16e-9987.67Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        M+RPGDWNC SC HLNFQRRD+CQRCG+PK+GGG  R GSGFG+GGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFD+PR +PRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AF +PAR+ ASAWKSGDWICARSGCNEHNFASRMECFRC+APRDSY
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

XP_022979604.1 ranBP2-type zinc finger protein At1g67325-like [Cucurbita maxima]4.22e-9987.67Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        M+RPGDWNC SC HLNFQRRD+CQRCG+PK+GGG GR GSGFG+GGSDVRPGDWYCS+GNCGAHNFASRSSCFKCGAFKDDMSAFDFD+PR +PRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
         FP+PAR+ ASAWKSGDWICARSGCNEHNFASRMECFRC+APRDSY
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

XP_038892097.1 zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida]1.07e-10896.58Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCG+PKSGGG+GRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPR SPRGISP+
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AF SPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

TrEMBL top hitse value%identityAlignment
A0A0A0KTI0 Uncharacterized protein2.28e-112100Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

A0A1S3BZE4 uncharacterized RNA-binding protein C17H9.04c-like3.65e-10997.26Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGG+GRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPR SPRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AF SPAR AASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

A0A6J1G9I4 TATA-binding protein-associated factor 2N isoform X37.96e-9481.1Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGI----------GRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA----FD
        MSRPGDWNCRSCQHLNFQRRDMCQRCG+PKSGGG           GRGGSGFGYGGSDVRPGDWYCS+GNCGAHNFASRSSCFKCGAFKDDMSA    FD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGI----------GRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA----FD

Query:  FDIPRRSPRGISPFAFPSPA----RTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        FD+PR   RG+SPF F +PA    RT ASAWKSGDWICARSGCNEHNFASRMECFRCSAP+DSY
Subjt:  FDIPRRSPRGISPFAFPSPA----RTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

A0A6J1GWG9 uncharacterized RNA-binding protein C17H9.04c-like1.05e-9987.67Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        M+RPGDWNC SC HLNFQRRD+CQRCG+PK+GGG  R GSGFG+GGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFD+PR +PRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AF +PAR+ ASAWKSGDWICARSGCNEHNFASRMECFRC+APRDSY
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

A0A6J1IX27 ranBP2-type zinc finger protein At1g67325-like2.04e-9987.67Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        M+RPGDWNC SC HLNFQRRD+CQRCG+PK+GGG GR GSGFG+GGSDVRPGDWYCS+GNCGAHNFASRSSCFKCGAFKDDMSAFDFD+PR +PRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
         FP+PAR+ ASAWKSGDWICARSGCNEHNFASRMECFRC+APRDSY
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c3.2e-0829.45Show/hide
Query:  RPGDWNCRSCQHLNFQRRDMCQRCGEP-----KSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGI
        RPGDWNC  C   NFQRR  C RC  P      +  G       F YG           S GN  +H  A+    +       + +    D+  ++    
Subjt:  RPGDWNCRSCQHLNFQRRDMCQRCGEP-----KSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGI

Query:  SPFAFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPR
              S +      +++GDW C   GC  HNFA  + C RC A R
Subjt:  SPFAFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPR

P32770 Asparagine-rich protein8.1e-0466.67Show/hide
Query:  RPGDWNCRSCQHLNFQRRDMCQRCGEP
        RPGDWNC SC   NFQRR  C RC  P
Subjt:  RPGDWNCRSCQHLNFQRRDMCQRCGEP

Q27294 RNA-binding protein cabeza3.7e-0445.59Show/hide
Query:  RPGDWNCRSCQHLNFQRRDMCQRCGEPK-----SGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHN
        R GDW C SC + NF  R+ C RC  PK     S GG G GG G G GG     G+   S G  G HN
Subjt:  RPGDWNCRSCQHLNFQRRDMCQRCGEPK-----SGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHN

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 23.7e-0431.31Show/hide
Query:  VRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDD----MSAFDFDIPRRSPRGISPFAFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPR
        V  GDW C    CG  NFA R+SC +CG  K      M A   +I +            + A  +   + + DW C    C   N+A R EC  C+ P+
Subjt:  VRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDD----MSAFDFDIPRRSPRGISPFAFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPR

Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein5.8e-0530.14Show/hide
Query:  RPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKC
        + GDW C++C  LNF +   C RC +  +                 + PG+W C   +C   NF   S C KC
Subjt:  RPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKC

AT2G17975.1 zinc finger (Ran-binding) family protein1.1e-0627.78Show/hide
Query:  RPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKC--GAFKDDMSAFDFDIPRRSPRGISPF
        R GDW CR C   N+  R  C++C E      I     G     S+    +W     N G  +  ++S+ +    G     +S +   +P      +   
Subjt:  RPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKC--GAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD
        + P+        W+ GDW+C  + C  HN+ASR EC RC   RD
Subjt:  AFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein3.6e-3143.57Show/hide
Query:  GDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPFAFPS
        GDW C +CQH NF++R+ CQ+CG PK G   G   S + Y  ++V  GDWYC   NCG+HN+ASR+SC++CG  K + +   +        G    A+ +
Subjt:  GDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPFAFPS

Query:  PARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD
                WK+GDW+C R GC  HN+ASR ECF+C   RD
Subjt:  PARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein2.4e-5161.08Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSG-GGI---------GRGGSGFGY-GGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA-----
        MSRPGDWNCRSC HLNFQRRD CQRCG+ +SG GG+         GR  S FG+  GSDVRPGDWYC+VGNCG HNFASRS+CFKCG FKD+  A     
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSG-GGI---------GRGGSGFGY-GGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA-----

Query:  -------FDFDIPRRSPRGISPFAFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD
               FD DI R             P     S+WKSGDWIC R GCNEHNFASRMECFRC+APRD
Subjt:  -------FDFDIPRRSPRGISPFAFPSPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein1.4e-4658.18Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGG-----GIGRGG----SGFGYG-GSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA------
        M+RPGDWNCR C HLNFQRRD CQRC EP+ GG       G GG    S FG+  G DVRPGDWYC++G+CG HNFA+RSSCFKCGA KD+ S       
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGG-----GIGRGG----SGFGYG-GSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA------

Query:  ---FDFDIPRRSPRGISPFAFPSP--ARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD
            D ++  R  RG+  F   S     T  S WKSGDWIC RSGCNEHNFASR ECFRC+AP++
Subjt:  ---FDFDIPRRSPRGISPFAFPSP--ARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGACCGGGAGACTGGAACTGTAGGTCATGCCAGCATTTGAACTTCCAGAGGAGGGATATGTGCCAGCGTTGCGGCGAACCGAAGAGCGGCGGCGGTATCGGAAG
AGGTGGGTCTGGTTTCGGGTACGGAGGATCGGATGTGAGGCCCGGGGACTGGTACTGTAGCGTTGGAAATTGTGGAGCTCACAATTTTGCAAGCCGATCAAGCTGCTTCA
AATGTGGAGCTTTCAAAGACGACATGTCGGCCTTTGACTTCGATATTCCTCGTCGTAGTCCTAGAGGGATTTCCCCATTTGCTTTTCCCAGTCCCGCCCGTACTGCTGCC
TCCGCTTGGAAGTCCGGTGACTGGATTTGTGCAAGGTCGGGTTGCAATGAACATAACTTTGCAAGCAGGATGGAGTGCTTTAGATGCAGTGCTCCGAGAGACTCCTATTA
A
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGACCGGGAGACTGGAACTGTAGGTCATGCCAGCATTTGAACTTCCAGAGGAGGGATATGTGCCAGCGTTGCGGCGAACCGAAGAGCGGCGGCGGTATCGGAAG
AGGTGGGTCTGGTTTCGGGTACGGAGGATCGGATGTGAGGCCCGGGGACTGGTACTGTAGCGTTGGAAATTGTGGAGCTCACAATTTTGCAAGCCGATCAAGCTGCTTCA
AATGTGGAGCTTTCAAAGACGACATGTCGGCCTTTGACTTCGATATTCCTCGTCGTAGTCCTAGAGGGATTTCCCCATTTGCTTTTCCCAGTCCCGCCCGTACTGCTGCC
TCCGCTTGGAAGTCCGGTGACTGGATTTGTGCAAGGTCGGGTTGCAATGAACATAACTTTGCAAGCAGGATGGAGTGCTTTAGATGCAGTGCTCCGAGAGACTCCTATTA
A
Protein sequenceShow/hide protein sequence
MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPFAFPSPARTAA
SAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY