CuGenDBv2

Gene ID	Cucsat.G16886
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	LYR motif protein
Genome location	ctg24:2542526..2545791
RNA-Seq Expression	Cucsat.G16886
Synteny	Cucsat.G16886
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044378.1 uncharacterized protein E6C27_scaffold46G001050 [Cucumis melo var. makuwa]

4.08e-160

95.85

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
        MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKP+YSSTP+HTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR

Query:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
        RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
Subjt:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP

Query:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIVG
        GYRGDGEFGYGDEIDEEDEDARLLLWGERLG  ++ M +VG
Subjt:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIVG

TYK29505.1 uncharacterized protein E5676_scaffold655G001060 [Cucumis melo var. makuwa]

5.89e-161

96.27

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
        MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTP+HTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR

Query:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
        RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
Subjt:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP

Query:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIVG
        GYRGDGEFGYGDEIDEEDEDARLLLWGERLG  ++ M +VG
Subjt:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIVG

XP_004152251.1 uncharacterized protein LOC101206482 [Cucumis sativus]

2.48e-189

100

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
        MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR

Query:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
        RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
Subjt:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP

Query:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
        GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
Subjt:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR

XP_008454343.1 PREDICTED: uncharacterized protein LOC103494772 [Cucumis melo]

1.01e-188

99.25

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
        MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTP+HTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR

Query:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
        RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
Subjt:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP

Query:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
        GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
Subjt:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR

XP_038906083.1 uncharacterized protein LOC120091971 [Benincasa hispida]

1.14e-172

93.33

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLI
        MSRR LDSR SIDSCTLK HGW+PFHLPKTLDSD H+ SAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSI       RS RLI
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLI

Query:  ARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGY
        ARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF SSNGGFDAQGNESGY
Subjt:  ARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGY

Query:  GSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
        GSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDS+MEIVGENTFADQKSHHRCRRKKHECRMVDALR
Subjt:  GSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KT54 Uncharacterized protein

1.20e-189

100

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
        MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR

Query:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
        RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
Subjt:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP

Query:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
        GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
Subjt:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR

A0A1S3BYD4 uncharacterized protein LOC103494772

4.89e-189

99.25

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
        MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTP+HTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR

Query:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
        RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
Subjt:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP

Query:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
        GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
Subjt:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR

A0A5A7TND4 Uncharacterized protein

1.97e-160

95.85

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
        MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKP+YSSTP+HTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR

Query:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
        RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
Subjt:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP

Query:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIVG
        GYRGDGEFGYGDEIDEEDEDARLLLWGERLG  ++ M +VG
Subjt:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIVG

A0A5D3E2G5 Uncharacterized protein

2.85e-161

96.27

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
        MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTP+HTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKR

Query:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
        RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP
Subjt:  RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEP

Query:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIVG
        GYRGDGEFGYGDEIDEEDEDARLLLWGERLG  ++ M +VG
Subjt:  GYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIVG

A0A6J1GCW8 uncharacterized protein LOC111452804 isoform X2

6.66e-159

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Query:  MSRRPLDSRHSIDSCTLKFHGWTPFH----LPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPAR----S
        MSRRPLDSR SIDSCTLK H W PFH     PKTLDSD H  S PT SKPYYSST LHTKRPCLSDRTTSFNVDAIDMS LSLIDDDKPSI   R    S
Subjt:  MSRRPLDSRHSIDSCTLKFHGWTPFH----LPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPAR----S

Query:  FRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDH-LGSGFVSSNGGFDAQG
        F LIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRRER+EKDH LG GF  SNGG DAQG
Subjt:  FRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDH-LGSGFVSSNGGFDAQG

Query:  NESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR
        NESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTF+DQKSHHRCRRKKHECRMVD LR
Subjt:  NESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02425.1 unknown protein

2.0e-67

56.47

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Query:  MSRRPLD-SRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDK-------PSIPPARS
        MS + L+ SR SI+SCT +   W PFH  KTLDS    +  P  +  ++S TP   KRPC SDR+TSF ++A  MS LSL DDD         +     S
Subjt:  MSRRPLD-SRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDK-------PSIPPARS

Query:  FRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSE-AKNSRREREEK--DHLGSGFVSSNGGFDA
        FRL+ARKRRRR SRSVSGRSSDRSGTRRCCS+G   AHGTCSD P AVGTDSSGELF  G+ANW+SDVSE A+NSRRER +   +   SG      G D 
Subjt:  FRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSE-AKNSRREREEK--DHLGSGFVSSNGGFDA

Query:  QGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKK-HECRMVDALR
         GNESGYGSEPGYRGD EFGYGDE D+E+ED + L WG+   DS M + GE  F+D K   RCRR++ H+ + VD++R
Subjt:  QGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKK-HECRMVDALR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTCGCAGACCCCTAGATTCCCGCCATTCAATTGACTCCTGTACTCTCAAATTCCATGGTTGGACCCCTTTCCATCTCCCCAAAACCCTAGATTCCGACCCCCATAA
TACCTCTGCTCCCACTAACTCTAAACCCTACTACTCTTCTACTCCCCTCCATACCAAACGCCCTTGTCTCTCCGATCGCACTACCTCTTTCAATGTCGACGCCATTGACA
TGTCCGCCCTCAGTTTGATTGACGACGACAAGCCTTCTATTCCTCCTGCCCGTAGCTTCCGATTGATTGCTAGGAAGCGACGTCGGCGTGGTTCTAGGTCTGTTTCTGGC
CGGAGTAGTGATCGAAGTGGGACTAGACGGTGTTGCTCCGTTGGGGCTTCCGCGGCTCATGGGACTTGCTCGGATTTTCCTATTGCGGTTGGGACTGATTCGAGTGGAGA
GTTGTTTGTTAATGGGGATGCCAATTGGTCTTCGGATGTGAGTGAAGCTAAGAATTCGAGGAGGGAGAGAGAGGAGAAGGATCATTTGGGTTCTGGGTTTGTTTCGTCTA
ATGGTGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGGTGAATTTGGATATGGTGATGAGATCGATGAGGAGGATGAGGAT
GCTAGATTGCTGTTGTGGGGTGAACGACTTGGAGATTCCAGAATGGAAATCGTAGGAGAGAACACATTTGCAGATCAGAAATCGCACCATAGATGTCGCCGTAAGAAGCA
CGAATGTAGAATGGTTGATGCCCTGAGGTGA

mRNA sequence

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Protein sequence

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MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSG
RSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDED
ARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR

Cucsat.G16886 (gene) of Cucumber (B10) v3 genome