; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G16905 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G16905
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionpre-mRNA-splicing factor CWC25-like isoform X2
Genome locationctg24:2826698..2827732
RNA-Seq ExpressionCucsat.G16905
SyntenyCucsat.G16905
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044330.1 rRNA biogenesis protein RRP36-like isoform X2 [Cucumis melo var. makuwa]1.65e-20094.57Show/hide
Query:  SPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAG
        SPKRSKRDRKTLEEKLSRNSSS VEDNK+RDQKHELRLVGQDMIPHESSLALESKPEGGAG GANRNSDGRDGGTKHSVNP EVPRSRSYFQHDERSNAG
Subjt:  SPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAG

Query:  QVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSN
        QVGRSFGRS TSERGWWKDSKDPDKD DR   K++TYKSQQRDEK QAAREDRHH+GSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKS+
Subjt:  QVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSN

Query:  DLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE
        D+HQIQEGRERREERGRD RYSEKLNNKH+NGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE
Subjt:  DLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE

Query:  EDQIAKVEALLSS
        EDQIAKVEALLSS
Subjt:  EDQIAKVEALLSS

TYK29459.1 rRNA biogenesis protein RRP36-like isoform X2 [Cucumis melo var. makuwa]2.34e-20094.25Show/hide
Query:  SPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAG
        SPKRSKRDRKTLEEKLSRNSSS VEDNK+RDQKHELRLVGQDMIPHESSLALESKPEGGAG GANR+SDGRDGGTKHSVNP EVPRSRSYFQHDERSNAG
Subjt:  SPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAG

Query:  QVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSN
        QVGRSFGRS TSERGWWKDSKDPDKD DR   K++TYKSQQRDEKPQAAREDRHH+GSSKLEVD LTPARKRPAFREKKITVDNEDGEKVAMVPESKKS+
Subjt:  QVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSN

Query:  DLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE
        D+HQIQEGRERREERGRD RYSEKLNNKH+NGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE
Subjt:  DLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE

Query:  EDQIAKVEALLSS
        EDQIAKVEALLSS
Subjt:  EDQIAKVEALLSS

XP_004152279.1 uncharacterized protein LOC101213709 [Cucumis sativus]2.66e-230100Show/hide
Query:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS
        MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS
Subjt:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS

Query:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK
        VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK
Subjt:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK

Query:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
        KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
Subjt:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT

Query:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
        RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
Subjt:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS

XP_008454399.1 PREDICTED: uncharacterized protein LOC103494816 [Cucumis melo]1.44e-21594.63Show/hide
Query:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS
        MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSS VEDNK+RDQKHELRLVGQDMIPHESSLALESKPEGGAG GANR+SDGRDGGTKHS
Subjt:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS

Query:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK
        VNP EVPRSRSYFQHDERSNAGQVGRSFGRS TSERGWWKDSKDPDKD DR   K++TYKSQQRDEKPQAAREDRHH+GSSKLEVD LTPARKRPAFREK
Subjt:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK

Query:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
        KITVDNEDGEKVAMVPESKKS+D+HQIQEGRERREERGRD RYSEKLNNKH+NGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
Subjt:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT

Query:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
        RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
Subjt:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS

XP_038903819.1 uncharacterized protein LOC120090316 [Benincasa hispida]3.79e-20088.96Show/hide
Query:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS
        MSRRE RESDSKRHRSRFDREPSPKRS+RDRKTLEEKLSRNSSSHVEDNK+RDQKHELR VGQDM+PHESSLALESK EG  G GA RNSDGRDGGTKHS
Subjt:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS

Query:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK
        VNPTEVPRSRSYFQHDER NAGQVGRSFG++ATSER WWKDSKDPDKD+DRASGK+  Y SQQRDEKPQAAREDRHHDGSSKLEVDAL PARKRPAFREK
Subjt:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK

Query:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
        KITV NE+GEK AMVPESKKS+DLHQ QEGRERREERGRD  YSEKLN KH NGDM ++RDEMKR GYP RERYGNGSGGGNYRGRDRF GRQGYR SGT
Subjt:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT

Query:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
        RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLS+
Subjt:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS

TrEMBL top hitse value%identityAlignment
A0A0A0KV12 Uncharacterized protein1.29e-230100Show/hide
Query:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS
        MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS
Subjt:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS

Query:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK
        VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK
Subjt:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK

Query:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
        KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
Subjt:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT

Query:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
        RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
Subjt:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS

A0A1S3BY17 uncharacterized protein LOC1034948167.00e-21694.63Show/hide
Query:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS
        MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSS VEDNK+RDQKHELRLVGQDMIPHESSLALESKPEGGAG GANR+SDGRDGGTKHS
Subjt:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS

Query:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK
        VNP EVPRSRSYFQHDERSNAGQVGRSFGRS TSERGWWKDSKDPDKD DR   K++TYKSQQRDEKPQAAREDRHH+GSSKLEVD LTPARKRPAFREK
Subjt:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREK

Query:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
        KITVDNEDGEKVAMVPESKKS+D+HQIQEGRERREERGRD RYSEKLNNKH+NGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT
Subjt:  KITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGT

Query:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
        RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
Subjt:  RVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS

A0A5A7TM88 rRNA biogenesis protein RRP36-like isoform X28.00e-20194.57Show/hide
Query:  SPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAG
        SPKRSKRDRKTLEEKLSRNSSS VEDNK+RDQKHELRLVGQDMIPHESSLALESKPEGGAG GANRNSDGRDGGTKHSVNP EVPRSRSYFQHDERSNAG
Subjt:  SPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAG

Query:  QVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSN
        QVGRSFGRS TSERGWWKDSKDPDKD DR   K++TYKSQQRDEK QAAREDRHH+GSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKS+
Subjt:  QVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSN

Query:  DLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE
        D+HQIQEGRERREERGRD RYSEKLNNKH+NGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE
Subjt:  DLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE

Query:  EDQIAKVEALLSS
        EDQIAKVEALLSS
Subjt:  EDQIAKVEALLSS

A0A5D3E169 rRNA biogenesis protein RRP36-like isoform X21.14e-20094.25Show/hide
Query:  SPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAG
        SPKRSKRDRKTLEEKLSRNSSS VEDNK+RDQKHELRLVGQDMIPHESSLALESKPEGGAG GANR+SDGRDGGTKHSVNP EVPRSRSYFQHDERSNAG
Subjt:  SPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAG

Query:  QVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSN
        QVGRSFGRS TSERGWWKDSKDPDKD DR   K++TYKSQQRDEKPQAAREDRHH+GSSKLEVD LTPARKRPAFREKKITVDNEDGEKVAMVPESKKS+
Subjt:  QVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSN

Query:  DLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE
        D+HQIQEGRERREERGRD RYSEKLNNKH+NGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE
Subjt:  DLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNE

Query:  EDQIAKVEALLSS
        EDQIAKVEALLSS
Subjt:  EDQIAKVEALLSS

A0A6J1FPJ0 pre-mRNA-splicing factor CWC25-like isoform X19.38e-17479.94Show/hide
Query:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS
        MSRREARESDSKR+RSRFD+EPSPKRS+RDRK LEEKLSRNSSSHVEDNK+RDQKHELR  GQD  PHESSLAL+S PEGG   GANRNSD R+GGTK S
Subjt:  MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHS

Query:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRH---HDGSSKLEVDALTPARKRPAF
        +NPTEVPRSRSYFQHD+R +AGQVGRSFGRS++S RGWWKDSK+ DK+SDRASGK+ TY SQ+RDE PQ  +ED H    DGSSKLEVD+  PARKRPAF
Subjt:  VNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRH---HDGSSKLEVDALTPARKRPAF

Query:  REKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRT
        REKKIT DNE+ EK  M  ESKK +D HQ Q+GRERREERGRD RYS+KL+ KH  GDMASKRDEMKR GY VRERYGNG GGGNYRGRDRFGGRQGY  
Subjt:  REKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRT

Query:  SG-TRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
        SG TRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALL+S
Subjt:  SG-TRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19650.1 cyclin-related5.0e-2837.65Show/hide
Query:  SRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVED--NKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKH
        +RRE+R+SD +RHRSR DREPSPKRS+RD K   E++       V D  + E++ +  LR    ++  H S    E K              G    TK 
Subjt:  SRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVED--NKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKH

Query:  SVNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQR-DEKPQAAREDRHHDGSSKLEVDALTPARKRPAFR
        + + ++VPRSR Y QHD+R + G+V     R  TS RG W+ S+D    S+R +G     KSQ R DE   + R DR  +        AL  +RKRPAFR
Subjt:  SVNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQR-DEKPQAAREDRHHDGSSKLEVDALTPARKRPAFR

Query:  EKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRF--GGRQGYR
        EKKI  +  +        + K +N        R + E   R   +SE+        D    RD+ +          G GS       RDRF   GR G+ 
Subjt:  EKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRF--GGRQGYR

Query:  TSGTRVE-KWKHDLFHEANRSPTPKNEEDQIAKVEALLSS
         S TR E KW HDLF EAN+SP    EE+QIAKVEALL+S
Subjt:  TSGTRVE-KWKHDLFHEANRSPTPKNEEDQIAKVEALLSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACGTCGTGAAGCTCGGGAATCCGATTCCAAGCGCCACCGTTCCCGATTCGATAGAGAACCCAGTCCCAAGAGGTCAAAGAGGGACAGGAAAACATTAGAGGAGAA
GTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGAACGGGATCAGAAACATGAGCTACGTCTTGTGGGGCAAGACATGATACCCCATGAGTCTTCATTAGCAC
TTGAGTCCAAACCAGAAGGTGGAGCTGGCATAGGAGCAAACAGGAACAGTGATGGGAGGGATGGAGGGACTAAACATTCAGTGAATCCCACTGAAGTGCCACGATCAAGA
TCTTATTTTCAGCACGATGAACGCAGTAATGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTGCAACTAGTGAGCGTGGTTGGTGGAAGGATTCAAAGGATCCAGATAA
GGATAGTGATAGAGCATCTGGGAAGTCATTAACTTATAAGTCACAGCAAAGAGATGAGAAACCACAAGCTGCGAGGGAGGATAGGCACCATGATGGGTCCTCGAAACTGG
AGGTTGATGCACTCACTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACAGTAGACAATGAAGATGGTGAGAAAGTGGCAATGGTACCAGAGAGTAAGAAA
TCAAATGATCTGCACCAGATTCAGGAGGGAAGGGAACGAAGAGAAGAAAGAGGCCGTGACCCCCGATATTCTGAAAAACTTAATAATAAGCATTCCAATGGAGATATGGC
TTCCAAAAGGGATGAAATGAAGAGAGTCGGCTATCCAGTGAGAGAAAGATATGGCAATGGAAGTGGTGGTGGAAATTACAGGGGAAGAGACAGATTTGGTGGGAGGCAAG
GATATCGAACCAGTGGTACCCGTGTAGAGAAATGGAAGCATGACCTGTTTCACGAGGCTAACCGGAGTCCAACCCCAAAGAATGAAGAGGATCAAATTGCCAAGGTTGAA
GCTCTTCTTTCTTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACGTCGTGAAGCTCGGGAATCCGATTCCAAGCGCCACCGTTCCCGATTCGATAGAGAACCCAGTCCCAAGAGGTCAAAGAGGGACAGGAAAACATTAGAGGAGAA
GTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGAACGGGATCAGAAACATGAGCTACGTCTTGTGGGGCAAGACATGATACCCCATGAGTCTTCATTAGCAC
TTGAGTCCAAACCAGAAGGTGGAGCTGGCATAGGAGCAAACAGGAACAGTGATGGGAGGGATGGAGGGACTAAACATTCAGTGAATCCCACTGAAGTGCCACGATCAAGA
TCTTATTTTCAGCACGATGAACGCAGTAATGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTGCAACTAGTGAGCGTGGTTGGTGGAAGGATTCAAAGGATCCAGATAA
GGATAGTGATAGAGCATCTGGGAAGTCATTAACTTATAAGTCACAGCAAAGAGATGAGAAACCACAAGCTGCGAGGGAGGATAGGCACCATGATGGGTCCTCGAAACTGG
AGGTTGATGCACTCACTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACAGTAGACAATGAAGATGGTGAGAAAGTGGCAATGGTACCAGAGAGTAAGAAA
TCAAATGATCTGCACCAGATTCAGGAGGGAAGGGAACGAAGAGAAGAAAGAGGCCGTGACCCCCGATATTCTGAAAAACTTAATAATAAGCATTCCAATGGAGATATGGC
TTCCAAAAGGGATGAAATGAAGAGAGTCGGCTATCCAGTGAGAGAAAGATATGGCAATGGAAGTGGTGGTGGAAATTACAGGGGAAGAGACAGATTTGGTGGGAGGCAAG
GATATCGAACCAGTGGTACCCGTGTAGAGAAATGGAAGCATGACCTGTTTCACGAGGCTAACCGGAGTCCAACCCCAAAGAATGAAGAGGATCAAATTGCCAAGGTTGAA
GCTCTTCTTTCTTCGTAG
Protein sequenceShow/hide protein sequence
MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSR
SYFQHDERSNAGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRHHDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKK
SNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVE
ALLSS