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Cucsat.G1701 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1701
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description50S ribosomal protein L17
Genome locationctg1002:535800..540044
RNA-Seq ExpressionCucsat.G1701
SyntenyCucsat.G1701
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000456 - Ribosomal protein L17
IPR036373 - Ribosomal protein L17 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148646.1 uncharacterized protein LOC101221792 [Cucumis sativus]1.08e-10097.48Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIE    ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

XP_008441029.1 PREDICTED: 50S ribosomal protein L17 [Cucumis melo]5.97e-9894.97Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAA FVRGDA+LHKLFTELAYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIE    ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQ APPKEIKSDSEI
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

XP_022132421.1 uncharacterized protein LOC111005280 [Momordica charantia]1.17e-8887.42Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGRP  HRMSMLRTMVSQLVKHERIETTVAKAKE+RRLADNMVQ GKE +L AARRAA FVRGD VLHKLFTELAYRYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIE    ENELRQSKPPNP P Q+ PLDPWTRSRLSKQFAPPKEIKSDSE+
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

XP_022979157.1 uncharacterized protein LOC111478877 [Cucurbita maxima]1.45e-9887.93Show/hide
Query:  FPSSSSVFALFSPLRMTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYK
        F SS+SVFALF PL MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKE+RRLADNMVQ GKEG+L AAR AA FVRGD VLHKLFTELAYRYK
Subjt:  FPSSSSVFALFSPLRMTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYK

Query:  DRTGGYTRFLRTRIRVGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        DR GGYTR LRTRIRVGDAAPMAYIE    ENELRQSKPPNP PPQ+ P+DPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  DRTGGYTRFLRTRIRVGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

XP_038880926.1 50S ribosomal protein L17 [Benincasa hispida]2.22e-9391.82Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGR   HRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQ GKEGTL AARRAA FVRGDAVLHKLFTE+AYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIE    ENELRQSKPPNPPPPQR PLDPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

TrEMBL top hitse value%identityAlignment
A0A0A0KFP7 Uncharacterized protein5.22e-10197.48Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIE    ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

A0A1S3B2I7 50S ribosomal protein L172.89e-9894.97Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAA FVRGDA+LHKLFTELAYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIE    ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQ APPKEIKSDSEI
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

A0A5D3DPW3 50S ribosomal protein L172.89e-9894.97Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAA FVRGDA+LHKLFTELAYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIE    ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQ APPKEIKSDSEI
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

A0A6J1BS83 uncharacterized protein LOC1110052805.68e-8987.42Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGRP  HRMSMLRTMVSQLVKHERIETTVAKAKE+RRLADNMVQ GKE +L AARRAA FVRGD VLHKLFTELAYRYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIE    ENELRQSKPPNP P Q+ PLDPWTRSRLSKQFAPPKEIKSDSE+
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

A0A6J1IN09 uncharacterized protein LOC1114788777.01e-9987.93Show/hide
Query:  FPSSSSVFALFSPLRMTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYK
        F SS+SVFALF PL MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKE+RRLADNMVQ GKEG+L AAR AA FVRGD VLHKLFTELAYRYK
Subjt:  FPSSSSVFALFSPLRMTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYK

Query:  DRTGGYTRFLRTRIRVGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        DR GGYTR LRTRIRVGDAAPMAYIE    ENELRQSKPPNP PPQ+ P+DPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  DRTGGYTRFLRTRIRVGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

SwissProt top hitse value%identityAlignment
A0L5Z9 50S ribosomal protein L174.4e-2655.56Show/hide
Query:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGD-AVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGD
        R+L R  +HR +M++ M+  L KHERIETTV +AKE+R +A+ ++ LGK G L A R+A   + GD  V+HKLFT+LA R KDR GGYTR L+TR R GD
Subjt:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGD-AVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGD

Query:  AAPMAYIE
         APM++IE
Subjt:  AAPMAYIE

B3E858 50S ribosomal protein L171.1e-2453.27Show/hide
Query:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGDA
        R+LGR  +HR++M R MV+ L+ HERI TT AKAKE+R +A+ M+ LGK G L A R+AA ++R  +V+ KLF+ +A RYKDR GGYTR ++   R+GDA
Subjt:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGDA

Query:  APMAYIE
        A ++ IE
Subjt:  APMAYIE

C6E4M9 50S ribosomal protein L173.2e-2448.36Show/hide
Query:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGDA
        R+LGR  +HR++M R MV+  ++HE+I TT AKAKE+R +A+ M+ LGK G L A R+AA ++R   V+ KLFTE+A RY +R GGYTR ++  IR GD 
Subjt:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGDA

Query:  APMAYIE--ENELRQSKPPNPP
        AP++ +E  E E++  K    P
Subjt:  APMAYIE--ENELRQSKPPNPP

Q749B4 50S ribosomal protein L179.9e-2649.6Show/hide
Query:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGDA
        R+LGR  +HR++M R MV+ L  HERI TT AKAKE+R +A+ M+ LGK G L A R+AA ++R   V+ KLF+ +A RYK+R GGYTR ++  IR GD 
Subjt:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGDA

Query:  APMAYIE------ENELRQSKPPNP
        AP++ IE      E ++++SKP  P
Subjt:  APMAYIE------ENELRQSKPPNP

Q8RE45 50S ribosomal protein L171.9e-2450.93Show/hide
Query:  FRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGD
        +RKLGR A HR +ML+ M   L+K ERIETTV +AKE+R+ A+ M+  GK+ TL++ R A  F+R + V+ K+F E+A +Y +R GGYTR ++T +R GD
Subjt:  FRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIRVGD

Query:  AAPMAYIE
        +A MA IE
Subjt:  AAPMAYIE

Arabidopsis top hitse value%identityAlignment
AT3G54210.1 Ribosomal protein L17 family protein1.4e-2241.54Show/hide
Query:  GIRVFPSSSSVFALFSPLRMTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELA
        G ++      ++A+    R+    KL RP   R ++LR + +QL+KH RI+TT A+A  +R+  D M+ L K+G+L   R+A G++    ++H LF E+ 
Subjt:  GIRVFPSSSSVFALFSPLRMTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELA

Query:  YRYKDRTGGYTRFLRTRIRVGDAAPMAYIE
         RY +R GGYTR +RT  R GD APMAYIE
Subjt:  YRYKDRTGGYTRFLRTRIRVGDAAPMAYIE

AT5G09770.1 Ribosomal protein L17 family protein3.7e-6885Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGRPA HRMSMLRTMVSQLVKHERIETTV KAKEVRRLADNM+QLGKEG+LSAARRAAGFVRGD VLHK+FTELA+RYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIK-SDSEI
        VGDAAPMAYIE    ENELRQSKP  P PPQR PLDPW RSRL++QFAPPKE K  DSE+
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIK-SDSEI

AT5G64650.1 Ribosomal protein L17 family protein1.2e-6682.5Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR
        MTKFRKLGRPA HRMSMLRTMVSQLV+HERIETTV KAKEVRRLADNM+QLGKEG+L+AARRAAGFVRGD VLHK+FTELA+RYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLHKLFTELAYRYKDRTGGYTRFLRTRIR

Query:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIK-SDSEI
        VGDAAPMAYIE    ENELRQSKP  P PP R PLDPW RSRL++Q+APPKE K SDS++
Subjt:  VGDAAPMAYIE----ENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIK-SDSEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGGAATTGGTCTACTTCGTTGCTTCAAAAACCCCGAAACGAAACCACAAGGGATCAGGGTTTTTCCATCTTCGAGCTCAGTCTTTGCTCTCTTTTCGCCATTAAGGAT
GACGAAGTTTAGGAAGCTTGGTCGACCTGCTGCACACCGGATGTCCATGCTCAGAACAATGGTTTCTCAGTTGGTGAAGCACGAACGCATTGAGACTACTGTTGCTAAGG
CTAAAGAAGTTCGGCGACTTGCTGATAACATGGTTCAACTGGGAAAAGAGGGTACCCTTTCTGCTGCAAGGCGTGCTGCTGGTTTTGTAAGAGGAGATGCTGTCCTTCAC
AAACTATTCACAGAACTGGCTTATCGATACAAAGATAGAACTGGTGGATATACAAGATTTCTGCGCACTCGTATACGTGTTGGTGATGCTGCACCAATGGCTTATATTGA
AGAAAATGAGCTCAGACAGTCAAAGCCTCCAAATCCTCCACCACCTCAGAGGCCTCCATTGGATCCATGGACTAGATCACGGCTTAGCAAGCAGTTCGCACCACCCAAAG
AGATCAAATCCGACTCCGAAATCTAA
mRNA sequenceShow/hide mRNA sequence
TTTGGAATTGGTCTACTTCGTTGCTTCAAAAACCCCGAAACGAAACCACAAGGGATCAGGGTTTTTCCATCTTCGAGCTCAGTCTTTGCTCTCTTTTCGCCATTAAGGAT
GACGAAGTTTAGGAAGCTTGGTCGACCTGCTGCACACCGGATGTCCATGCTCAGAACAATGGTTTCTCAGTTGGTGAAGCACGAACGCATTGAGACTACTGTTGCTAAGG
CTAAAGAAGTTCGGCGACTTGCTGATAACATGGTTCAACTGGGAAAAGAGGGTACCCTTTCTGCTGCAAGGCGTGCTGCTGGTTTTGTAAGAGGAGATGCTGTCCTTCAC
AAACTATTCACAGAACTGGCTTATCGATACAAAGATAGAACTGGTGGATATACAAGATTTCTGCGCACTCGTATACGTGTTGGTGATGCTGCACCAATGGCTTATATTGA
AGAAAATGAGCTCAGACAGTCAAAGCCTCCAAATCCTCCACCACCTCAGAGGCCTCCATTGGATCCATGGACTAGATCACGGCTTAGCAAGCAGTTCGCACCACCCAAAG
AGATCAAATCCGACTCCGAAATCTAA
Protein sequenceShow/hide protein sequence
FGIGLLRCFKNPETKPQGIRVFPSSSSVFALFSPLRMTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDAVLH
KLFTELAYRYKDRTGGYTRFLRTRIRVGDAAPMAYIEENELRQSKPPNPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI