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Cucsat.G17078 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G17078
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionArabinogalactan peptide 22
Genome locationctg2607:747658..749101
RNA-Seq ExpressionCucsat.G17078
SyntenyCucsat.G17078
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57863.1 hypothetical protein Csa_009896 [Cucumis sativus]3.79e-33100Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

TYK03143.1 arabinogalactan peptide 22 [Cucumis melo var. makuwa]1.10e-2688.57Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+ALP+SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

XP_008465391.1 PREDICTED: arabinogalactan peptide 22 [Cucumis melo]1.76e-2587.14Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+AL +SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

XP_022968217.1 arabinogalactan peptide 22-like isoform X2 [Cucurbita maxima]8.82e-2275.68Show/hide
Query:  RETEMAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        RE EMA LRA CFG+YA ++IA+FYVV LP+S A+  +SSPAPAPAPTSDGTAIDQGIAY+LML+AL LTYIIH
Subjt:  RETEMAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

XP_038898060.1 arabinogalactan protein 41-like [Benincasa hispida]3.52e-2281.43Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVL+A CFGIYAA++IAVFYVV LP+S+A+ SSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

TrEMBL top hitse value%identityAlignment
A0A0A0L7T5 Uncharacterized protein1.84e-33100Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

A0A1S3CNS5 arabinogalactan peptide 228.54e-2687.14Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+AL +SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

A0A5A7U3P4 Arabinogalactan peptide 228.54e-2687.14Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+AL +SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

A0A5D3BTZ5 Arabinogalactan peptide 225.31e-2788.57Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+ALP+SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

A0A6J1HT15 arabinogalactan peptide 22-like isoform X24.27e-2275.68Show/hide
Query:  RETEMAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        RE EMA LRA CFG+YA ++IA+FYVV LP+S A+  +SSPAPAPAPTSDGTAIDQGIAY+LML+AL LTYIIH
Subjt:  RETEMAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 162.5e-0865.45Show/hide
Query:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        L +  + V L L+ AQ    S APAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

Q8L9T8 Arabinogalactan protein 413.5e-1061.29Show/hide
Query:  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        FG+  + ++++ + + LP++ AQ    S APAPAPTSDGT IDQGIAYVLMLVALVLTY+IH
Subjt:  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

Q9FK16 Arabinogalactan protein 222.5e-0863.64Show/hide
Query:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        ++AVF ++++ L     S SS +PAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Subjt:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

Q9M373 Arabinogalactan protein 209.4e-0856.92Show/hide
Query:  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        AS   +    L A  + V  P + AQ    S APAP+PTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 161.8e-0965.45Show/hide
Query:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        L +  + V L L+ AQ    S APAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

AT3G61640.1 arabinogalactan protein 206.7e-0956.92Show/hide
Query:  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        AS   +    L A  + V  P + AQ    S APAP+PTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

AT5G24105.1 arabinogalactan protein 412.5e-1161.29Show/hide
Query:  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        FG+  + ++++ + + LP++ AQ    S APAPAPTSDGT IDQGIAYVLMLVALVLTY+IH
Subjt:  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

AT5G53250.1 arabinogalactan protein 221.8e-0963.64Show/hide
Query:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        ++AVF ++++ L     S SS +PAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Subjt:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAACAGAAGGGACCAATACGATTGTTTGAAGACAGTCATAAAACAGCCACAAGATTGGTGTAAAGGGTTCCAGCACAAAAGAAAAAAGAAGCCAAAAATAGTGAAGAA
ACTTTGCCAGCAAAGGATTGAGTTCCAGCACAATCAACTTAACAGTCTGTCTATCCAGCACAGCAAAAGCATAAAAAATAAGGAATCTTTACAAAGAGAGAATGCAAAAT
CACATGGGTTTGCTTGGATTCCCAAAGCTTACAGTTCAAACATAAACAGTATTAAATCCCCAATTCCTCCATTTCCATTCTTCTCATTCATAATCTTCAAATTTCTTCTT
CTTCTGTCTCTCTCTAGGGTTCTTCTGAGAGAGACAGAGATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTATTGCTGTCTTTTATGTTGTTGC
GTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAGCTCCAACTAGTGATGGAACCGCAATAGACCAAGGAATAGCATACGTTCTAATGCTGG
TGGCTTTAGTGCTAACTTATATCATCCATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAACAGAAGGGACCAATACGATTGTTTGAAGACAGTCATAAAACAGCCACAAGATTGGTGTAAAGGGTTCCAGCACAAAAGAAAAAAGAAGCCAAAAATAGTGAAGAA
ACTTTGCCAGCAAAGGATTGAGTTCCAGCACAATCAACTTAACAGTCTGTCTATCCAGCACAGCAAAAGCATAAAAAATAAGGAATCTTTACAAAGAGAGAATGCAAAAT
CACATGGGTTTGCTTGGATTCCCAAAGCTTACAGTTCAAACATAAACAGTATTAAATCCCCAATTCCTCCATTTCCATTCTTCTCATTCATAATCTTCAAATTTCTTCTT
CTTCTGTCTCTCTCTAGGGTTCTTCTGAGAGAGACAGAGATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTATTGCTGTCTTTTATGTTGTTGC
GTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAGCTCCAACTAGTGATGGAACCGCAATAGACCAAGGAATAGCATACGTTCTAATGCTGG
TGGCTTTAGTGCTAACTTATATCATCCATTGA
Protein sequenceShow/hide protein sequence
KNRRDQYDCLKTVIKQPQDWCKGFQHKRKKKPKIVKKLCQQRIEFQHNQLNSLSIQHSKSIKNKESLQRENAKSHGFAWIPKAYSSNINSIKSPIPPFPFFSFIIFKFLL
LLSLSRVLLRETEMAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH