; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G1711 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1711
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTFIIS N-terminal domain-containing protein
Genome locationctg1002:763185..766468
RNA-Seq ExpressionCucsat.G1711
SyntenyCucsat.G1711
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR017923 - Transcription factor IIS, N-terminal
IPR035441 - TFIIS/LEDGF domain superfamily
IPR044790 - Mediator of RNA polymerase II transcription subunit 26c-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141981.1 probable mediator of RNA polymerase II transcription subunit 26c [Cucumis sativus]1.53e-13999.51Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
        RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS

Query:  QGRHW
        QGRHW
Subjt:  QGRHW

XP_008440997.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c [Cucumis melo]2.92e-13798.54Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKH SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
        RNNSEPEPKGKSVPRRDA PKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS

Query:  QGRHW
        QGRHW
Subjt:  QGRHW

XP_022950583.1 probable mediator of RNA polymerase II transcription subunit 26c [Cucurbita moschata]2.37e-12993.17Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKH SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATL+ADGDSPQQK  QNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
        RNN EPEPKGKSVPRRDA PKP Q AP SS TPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAK+QRTIQVMDIHEIPKPKN FFSKNKG+GGGS
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS

Query:  QGRHW
        QGRHW
Subjt:  QGRHW

XP_023544969.1 probable mediator of RNA polymerase II transcription subunit 26c [Cucurbita pepo subsp. pepo]1.18e-12993.17Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKH SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATL+AD DSPQQK PQNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
        RNN EPEPKGKSVPRRDA PKP Q AP SS TPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAK+QRTIQVMDIHEIPKPKN FFSKNKG+GGGS
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS

Query:  QGRHW
        QGRHW
Subjt:  QGRHW

XP_038882890.1 probable mediator of RNA polymerase II transcription subunit 26c [Benincasa hispida]1.38e-13597.56Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKH SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
        RNNSEPEPKGKSVPRRDA PKP Q APTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS

Query:  QGRHW
        QGRHW
Subjt:  QGRHW

TrEMBL top hitse value%identityAlignment
A0A0A0KHV9 TFIIS N-terminal domain-containing protein7.39e-14099.51Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
        RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS

Query:  QGRHW
        QGRHW
Subjt:  QGRHW

A0A1S3B2G2 probable mediator of RNA polymerase II transcription subunit 26c1.41e-13798.54Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKH SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
        RNNSEPEPKGKSVPRRDA PKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS

Query:  QGRHW
        QGRHW
Subjt:  QGRHW

A0A5A7SIU9 Putative mediator of RNA polymerase II transcription subunit 26c1.41e-13798.54Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKH SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
        RNNSEPEPKGKSVPRRDA PKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS

Query:  QGRHW
        QGRHW
Subjt:  QGRHW

A0A6J1GFA3 probable mediator of RNA polymerase II transcription subunit 26c1.15e-12993.17Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKH SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATL+ADGDSPQQK  QNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS
        RNN EPEPKGKSVPRRDA PKP Q AP SS TPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAK+QRTIQVMDIHEIPKPKN FFSKNKG+GGGS
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS

Query:  QGRHW
        QGRHW
Subjt:  QGRHW

A0A6J1ILB4 probable mediator of RNA polymerase II transcription subunit 26c3.39e-12993.2Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD
        +NLADMDITFQALKETDIGRHVNRLRKH SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATL+ADGDSPQQK  QNGYHQVPDFAYSPNPHNGGSGSD
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSD

Query:  RNNSEPEPKGKSVPRRDALPKPTQQAP-TSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGG
        RNN EPEPKGKSVPRRDALPKP Q AP +SS TPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAK+QRTIQVMDIHEIPKPKN FFSKNKG+GGG
Subjt:  RNNSEPEPKGKSVPRRDALPKPTQQAP-TSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGG

Query:  SQGRHW
        SQGRHW
Subjt:  SQGRHW

SwissProt top hitse value%identityAlignment
F4J4Y5 Probable mediator of RNA polymerase II transcription subunit 26a2.3e-0726.95Show/hide
Query:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTAT-----LLADGDSPQQKAPQNGYHQVPDFAYSPN
        L   + L  M ++   LK+T+IG+ VN LR+H S+ + +L K L  +WK +VD+W  +N P E   T      L      +++A  +  H +  +A  PN
Subjt:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTAT-----LLADGDSPQQKAPQNGYHQVPDFAYSPN

Query:  -----------------PHNGGSGSDRNNSEP-----------------------------------------EPKGKSVPRRDALPKPTQQAPTSSLTP
                          H+  S  +R +                                            EPK ++   R+ +    Q+ PT ++T 
Subjt:  -----------------PHNGGSGSDRNNSEP-----------------------------------------EPKGKSVPRRDALPKPTQQAPTSSLTP

Query:  QNR-----QKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPK
        Q R     Q+++ K  + DS K   A+++LQE+Y + ENAKRQRTIQV++   IPK
Subjt:  QNR-----QKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPK

F4KFC7 Probable mediator of RNA polymerase II transcription subunit 26c1.2e-5357.94Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGE-QTATLLADGDSPQQKAPQNG-YHQVPDFAYSPNPHNGGSG
        +NL DMDITFQAL+ETDIGRHVNR+RKHPSN+VRRL K LV+KWKE VDEWV+ NQPG+ +  +L+AD DSP QKA  NG   QVPDF YSP P NG S 
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGE-QTATLLADGDSPQQKAPQNG-YHQVPDFAYSPNPHNGGSG

Query:  SDRNN--SEPEPKGKSV---PRRD--ALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFS
        S +N+  +EPE K + V   PRR+  +  KP++ +P+    P+++   + KE +FD     +ARKRLQ+NY++AENAK+QRTIQVMDIH+IPKPK   F 
Subjt:  SDRNN--SEPEPKGKSV---PRRD--ALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFS

Query:  KNKGSGGGSQGRHW
          KG G    GRHW
Subjt:  KNKGSGGGSQGRHW

Q54YG9 Transcription elongation factor A protein 15.3e-0439.62Show/hide
Query:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVD
        L C KN  +  IT   LK TDIG+ V +LR H    +    K L+ KWK+ ++
Subjt:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVD

Q9FHK9 Probable mediator of RNA polymerase II transcription subunit 26b1.6e-0825.72Show/hide
Query:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQ-------PGEQTATLLADGDSPQQKAP---------QNGY
        L+  ++L  M +    LK T+IG+ VN LRKH S+ +R+L K L+ +WKE+VD+WV   +         E     + D +      P          NG+
Subjt:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQ-------PGEQTATLLADGDSPQQKAP---------QNGY

Query:  ---HQVPDFAYSPNPHNGGSGSDRNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTP-----------------QNRQK----------------------
           H      +  NP N    +     E  P+  +  + +      Q AP  S+ P                 + R K                      
Subjt:  ---HQVPDFAYSPNPHNGGSGSDRNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTP-----------------QNRQK----------------------

Query:  --------EQQKEANFDSQ-KLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRHW
                +Q+K    D+  K   A+++LQE+Y+  ENAK+QRTIQV+++  IPK  +A   K +    G   R+W
Subjt:  --------EQQKEANFDSQ-KLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRHW

Arabidopsis top hitse value%identityAlignment
AT3G10820.1 Transcription elongation factor (TFIIS) family protein2.1e-0838.81Show/hide
Query:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTAT
        L   + L  M ++   LK+T+IG+ VN LR+H S+ + +L K L  +WK +VD+W  +N P E   T
Subjt:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTAT

AT3G10820.2 Transcription elongation factor (TFIIS) family protein1.6e-0826.95Show/hide
Query:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTAT-----LLADGDSPQQKAPQNGYHQVPDFAYSPN
        L   + L  M ++   LK+T+IG+ VN LR+H S+ + +L K L  +WK +VD+W  +N P E   T      L      +++A  +  H +  +A  PN
Subjt:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTAT-----LLADGDSPQQKAPQNGYHQVPDFAYSPN

Query:  -----------------PHNGGSGSDRNNSEP-----------------------------------------EPKGKSVPRRDALPKPTQQAPTSSLTP
                          H+  S  +R +                                            EPK ++   R+ +    Q+ PT ++T 
Subjt:  -----------------PHNGGSGSDRNNSEP-----------------------------------------EPKGKSVPRRDALPKPTQQAPTSSLTP

Query:  QNR-----QKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPK
        Q R     Q+++ K  + DS K   A+++LQE+Y + ENAKRQRTIQV++   IPK
Subjt:  QNR-----QKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPK

AT5G05140.1 Transcription elongation factor (TFIIS) family protein1.1e-0925.72Show/hide
Query:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQ-------PGEQTATLLADGDSPQQKAP---------QNGY
        L+  ++L  M +    LK T+IG+ VN LRKH S+ +R+L K L+ +WKE+VD+WV   +         E     + D +      P          NG+
Subjt:  LNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQ-------PGEQTATLLADGDSPQQKAP---------QNGY

Query:  ---HQVPDFAYSPNPHNGGSGSDRNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTP-----------------QNRQK----------------------
           H      +  NP N    +     E  P+  +  + +      Q AP  S+ P                 + R K                      
Subjt:  ---HQVPDFAYSPNPHNGGSGSDRNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTP-----------------QNRQK----------------------

Query:  --------EQQKEANFDSQ-KLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRHW
                +Q+K    D+  K   A+++LQE+Y+  ENAK+QRTIQV+++  IPK  +A   K +    G   R+W
Subjt:  --------EQQKEANFDSQ-KLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRHW

AT5G09850.1 Transcription elongation factor (TFIIS) family protein8.9e-5557.94Show/hide
Query:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGE-QTATLLADGDSPQQKAPQNG-YHQVPDFAYSPNPHNGGSG
        +NL DMDITFQAL+ETDIGRHVNR+RKHPSN+VRRL K LV+KWKE VDEWV+ NQPG+ +  +L+AD DSP QKA  NG   QVPDF YSP P NG S 
Subjt:  KNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGE-QTATLLADGDSPQQKAPQNG-YHQVPDFAYSPNPHNGGSG

Query:  SDRNN--SEPEPKGKSV---PRRD--ALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFS
        S +N+  +EPE K + V   PRR+  +  KP++ +P+    P+++   + KE +FD     +ARKRLQ+NY++AENAK+QRTIQVMDIH+IPKPK   F 
Subjt:  SDRNN--SEPEPKGKSV---PRRD--ALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFS

Query:  KNKGSGGGSQGRHW
          KG G    GRHW
Subjt:  KNKGSGGGSQGRHW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGGTTGAACTGCTTCAAAAACTTAGCAGACATGGATATAACATTCCAAGCTCTTAAGGAAACTGATATTGGAAGGCATGTGAATCGGTTGAGAAAGCATCCATC
AAATGATGTTCGTAGATTGGTGAAACATCTTGTCAGAAAATGGAAGGAGATTGTTGATGAATGGGTAAGGTTGAATCAGCCTGGGGAGCAAACAGCTACACTCTTAGCTG
ATGGCGACTCACCCCAGCAAAAGGCTCCTCAAAATGGCTATCATCAGGTTCCTGATTTTGCATACTCTCCGAATCCACACAATGGAGGTTCTGGGTCCGATAGAAATAAC
TCAGAACCGGAACCGAAGGGGAAATCCGTTCCAAGAAGAGATGCCCTGCCGAAACCAACACAACAAGCTCCAACGTCGTCTTTAACTCCTCAAAATAGACAGAAAGAACA
ACAGAAAGAAGCAAATTTTGATTCCCAAAAGCTTGCATCGGCTAGAAAAAGGCTTCAAGAGAATTACAAGGAAGCCGAAAATGCTAAAAGGCAAAGAACAATTCAAGTCA
TGGACATCCATGAGATCCCAAAGCCAAAGAATGCCTTCTTCTCAAAGAACAAAGGCAGTGGTGGTGGTTCTCAAGGCAGACACTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTGGTTGAACTGCTTCAAAAACTTAGCAGACATGGATATAACATTCCAAGCTCTTAAGGAAACTGATATTGGAAGGCATGTGAATCGGTTGAGAAAGCATCCATC
AAATGATGTTCGTAGATTGGTGAAACATCTTGTCAGAAAATGGAAGGAGATTGTTGATGAATGGGTAAGGTTGAATCAGCCTGGGGAGCAAACAGCTACACTCTTAGCTG
ATGGCGACTCACCCCAGCAAAAGGCTCCTCAAAATGGCTATCATCAGGTTCCTGATTTTGCATACTCTCCGAATCCACACAATGGAGGTTCTGGGTCCGATAGAAATAAC
TCAGAACCGGAACCGAAGGGGAAATCCGTTCCAAGAAGAGATGCCCTGCCGAAACCAACACAACAAGCTCCAACGTCGTCTTTAACTCCTCAAAATAGACAGAAAGAACA
ACAGAAAGAAGCAAATTTTGATTCCCAAAAGCTTGCATCGGCTAGAAAAAGGCTTCAAGAGAATTACAAGGAAGCCGAAAATGCTAAAAGGCAAAGAACAATTCAAGTCA
TGGACATCCATGAGATCCCAAAGCCAAAGAATGCCTTCTTCTCAAAGAACAAAGGCAGTGGTGGTGGTTCTCAAGGCAGACACTGGTGA
Protein sequenceShow/hide protein sequence
MPWLNCFKNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGSGSDRNN
SEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRHW