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Cucsat.G17139 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G17139
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description60S ribosomal protein L34
Genome locationctg2699:45695..48213
RNA-Seq ExpressionCucsat.G17139
SyntenyCucsat.G17139
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138165.3 60S ribosomal protein L34 [Cucumis sativus]2.05e-54100Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

XP_004138175.3 60S ribosomal protein L34 [Cucumis sativus]8.34e-5498.94Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

XP_027095336.1 60S ribosomal protein L34-like [Coffea arabica]5.88e-5498.94Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

XP_027098139.1 60S ribosomal protein L34 [Coffea arabica]5.88e-5498.94Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

XP_038889603.1 60S ribosomal protein L34 [Benincasa hispida]8.34e-5497.87Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

TrEMBL top hitse value%identityAlignment
A0A068TVQ9 Uncharacterized protein2.85e-5498.94Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

A0A0A0LK03 Uncharacterized protein9.94e-55100Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

A0A1S3BV34 60S ribosomal protein L349.94e-55100Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

A0A5A7UWQ0 60S ribosomal protein L349.94e-55100Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

A0A6P6V549 60S ribosomal protein L342.85e-5498.94Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L341.2e-4092.55Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQK KEK A+K+
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

P41098 60S ribosomal protein L344.8e-4294.68Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

Q42351 60S ribosomal protein L34-11.4e-4193.62Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

Q9FE65 60S ribosomal protein L34-27.0e-4193.55Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK
        GGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK

Q9LJW6 60S ribosomal protein L34-35.9e-4091.49Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein1.0e-4293.62Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS

AT1G26880.2 Ribosomal protein L34e superfamily protein2.6e-3093.94Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERII
        GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRER +
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERII

AT1G69620.1 ribosomal protein L345.0e-4293.55Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK
        GGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK

AT3G28900.1 Ribosomal protein L34e superfamily protein4.2e-4191.49Show/hide
Query:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        GGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Subjt:  GGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGTGCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGCGTCGTCAAAACCCCTGGTAAACTATCGGATTCCTTCCCATAGC
TATTCTATCAAGTGTTTTTTAACTTCAATGTCAATCAATCGGTTTTCGTATTTATTGTTTCTGCTTTTATCATCTCCTTCTATTTTGTGTTTAGGTGGGAAGCTT
GTGTATCAGACTACCAAGAAAAGAGCTAGCGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATACAAGAGGTCT
AGACTAGCTAGGAACAGGAGGACTGTGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAG
AAGATTGTGAAGAAGGTATTGAAGATTCAGAAGGCGAAGGAAAAGCTGGCATCAAAGAGCTAA
mRNA sequenceShow/hide mRNA sequence
TGGTGCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGCGTCGTCAAAACCCCTGGTAAACTATCGGATTCCTTCCCATAGC
TATTCTATCAAGTGTTTTTTAACTTCAATGTCAATCAATCGGTTTTCGTATTTATTGTTTCTGCTTTTATCATCTCCTTCTATTTTGTGTTTAGGTGGGAAGCTT
GTGTATCAGACTACCAAGAAAAGAGCTAGCGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATACAAGAGGTCT
AGACTAGCTAGGAACAGGAGGACTGTGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAG
AAGATTGTGAAGAAGGTATTGAAGATTCAGAAGGCGAAGGAAAAGCTGGCATCAAAGAGCTAA
Protein sequenceShow/hide protein sequence
WCSVLHTASAIAMLPSLTSTASSKPLVNYRIPSHSYSIKCFLTSMSINRFSYLLFLLLSSPSILCLGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRS
RLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS