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Cucsat.G17156 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G17156
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTetratricopeptide-like helical
Genome locationctg2699:395856..399042
RNA-Seq ExpressionCucsat.G17156
SyntenyCucsat.G17156
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147349.3 uncharacterized protein LOC101214268 [Cucumis sativus]1.00e-187100Show/hide
Query:  MRKKEIHNLIPKLYLKYKQFSMENMKIRLKFCHQNKPTAMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAF
        MRKKEIHNLIPKLYLKYKQFSMENMKIRLKFCHQNKPTAMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAF
Subjt:  MRKKEIHNLIPKLYLKYKQFSMENMKIRLKFCHQNKPTAMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAF

Query:  LLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAE
        LLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAE
Subjt:  LLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAE

Query:  MEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
        MEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
Subjt:  MEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS

XP_008460886.1 PREDICTED: uncharacterized protein LOC103499627 [Cucumis melo]1.31e-13094.93Show/hide
Query:  MGSTTARLLIPHLLLPSSSSSS------HNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAA
        MGSTTARLLIPHLL PSSSSSS      HNPSTN  TKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIP NPIQPSSSFAVESFDPVSRSEK+ASAA
Subjt:  MGSTTARLLIPHLLLPSSSSSS------HNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAA

Query:  ISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAE
        ISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAE
Subjt:  ISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAE

Query:  NQFTIATLLDPHYVDIS
        NQFTIATLLDPHYVDIS
Subjt:  NQFTIATLLDPHYVDIS

XP_022932010.1 uncharacterized protein LOC111438340 [Cucurbita moschata]2.94e-12686.32Show/hide
Query:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS
        M S TAR LIPHLL PSSS+   NP+ N   K SKP+S P    LPTRRLLLFSLPIATA LLPIP NPIQPSS  A+E FDPVSRSE++ASAAISRRVS
Subjt:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS

Query:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA
        EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRA ALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHA LLAENQFTIA
Subjt:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA

Query:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
        TLLDPHYVDISYVKETKHWPPSLISSL++FLTLS
Subjt:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS

XP_023512389.1 uncharacterized protein LOC111777156 [Cucurbita pepo subsp. pepo]1.03e-12686.32Show/hide
Query:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS
        M S TAR LIPHLL PSSS+   NP+ N   K SKP+SFP    LPTRRLLLFSLPIATA LLPIP NPIQPSS  A+ESFDPVSRSE++ASAAISRRVS
Subjt:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS

Query:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA
        EAVELLDKGRELQALGDF+ ALLYFTQVIDKYKDFAFSDYARVGRA ALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHA LLAENQFTIA
Subjt:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA

Query:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
        TLLDPHYVDISYVKETKHWPPSLISSL++FLTLS
Subjt:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS

XP_038901433.1 uncharacterized protein LOC120088306 isoform X1 [Benincasa hispida]2.06e-13689.32Show/hide
Query:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS
        MGS TAR+L PHLL PSSSS  HNP  N  TKS KP +F NHN LPTRRLLLFSLPIATAFLLPI  N  +PSS +AVESFDPVSRSE++ASAAISRRVS
Subjt:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS

Query:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA
        EAVELLDKGRELQALGDFNQALLYFT+VIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA
Subjt:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA

Query:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
        TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
Subjt:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS

TrEMBL top hitse value%identityAlignment
A0A0A0LN32 Uncharacterized protein4.86e-188100Show/hide
Query:  MRKKEIHNLIPKLYLKYKQFSMENMKIRLKFCHQNKPTAMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAF
        MRKKEIHNLIPKLYLKYKQFSMENMKIRLKFCHQNKPTAMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAF
Subjt:  MRKKEIHNLIPKLYLKYKQFSMENMKIRLKFCHQNKPTAMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAF

Query:  LLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAE
        LLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAE
Subjt:  LLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAE

Query:  MEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
        MEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
Subjt:  MEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS

A0A1S3CCZ2 uncharacterized protein LOC1034996276.36e-13194.93Show/hide
Query:  MGSTTARLLIPHLLLPSSSSSS------HNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAA
        MGSTTARLLIPHLL PSSSSSS      HNPSTN  TKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIP NPIQPSSSFAVESFDPVSRSEK+ASAA
Subjt:  MGSTTARLLIPHLLLPSSSSSS------HNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAA

Query:  ISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAE
        ISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAE
Subjt:  ISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAE

Query:  NQFTIATLLDPHYVDIS
        NQFTIATLLDPHYVDIS
Subjt:  NQFTIATLLDPHYVDIS

A0A5D3BSI6 Tetratricopeptide-like helical6.36e-13194.93Show/hide
Query:  MGSTTARLLIPHLLLPSSSSSS------HNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAA
        MGSTTARLLIPHLL PSSSSSS      HNPSTN  TKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIP NPIQPSSSFAVESFDPVSRSEK+ASAA
Subjt:  MGSTTARLLIPHLLLPSSSSSS------HNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAA

Query:  ISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAE
        ISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAE
Subjt:  ISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAE

Query:  NQFTIATLLDPHYVDIS
        NQFTIATLLDPHYVDIS
Subjt:  NQFTIATLLDPHYVDIS

A0A6J1F108 uncharacterized protein LOC1114383401.42e-12686.32Show/hide
Query:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS
        M S TAR LIPHLL PSSS+   NP+ N   K SKP+S P    LPTRRLLLFSLPIATA LLPIP NPIQPSS  A+E FDPVSRSE++ASAAISRRVS
Subjt:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS

Query:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA
        EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRA ALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHA LLAENQFTIA
Subjt:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA

Query:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
        TLLDPHYVDISYVKETKHWPPSLISSL++FLTLS
Subjt:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS

A0A6J1I3T3 uncharacterized protein LOC1114703081.26e-12485.04Show/hide
Query:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS
        M S TA  LIPHLL PSSS+   NP+ N   K SKP+SFP    LPT+RLLLFSLPIATA LLPIP NPIQPSS  A+ESFDPVSRSE++ASA ISRRVS
Subjt:  MGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVS

Query:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA
        EAVELLDKGRELQALGDF+QALLYFTQVIDKYKDFAFSDYARVGRA ALYEIG REEAIAEMEDVSISLKGYPEVHAALAAALYVDKHA LLAENQFTIA
Subjt:  EAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIA

Query:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS
        TLLDPHYVDISYVKETKHWPPSLISSL++FLTLS
Subjt:  TLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAAAAGAAATACACAATTTGATTCCAAAATTATATCTAAAGTATAAGCAATTTAGTATGGAAAATATGAAAATAAGGCTGAAGTTTTGCCACCAAAACAAACC
AACAGCCATGGGTTCTACAACTGCAAGACTGCTGATTCCTCATCTTCTTCTTCCCTCTTCTTCTTCTTCTTCTCACAATCCATCAACAAACACTCGCACCAAATCTTCAA
AACCCCTTTCATTTCCCAACCATAATTCATTACCAACCAGGCGTTTGTTGCTTTTCTCCCTCCCCATAGCCACTGCCTTTCTTCTCCCAATTCCGGGCAATCCAATTCAA
CCCAGTTCTTCCTTTGCTGTGGAGAGCTTTGACCCTGTCAGCCGTTCCGAGAAAGATGCCAGTGCCGCCATTTCACGAAGAGTATCTGAAGCTGTGGAGCTTCTCGATAA
AGGCAGGGAGTTGCAAGCTCTTGGTGATTTCAATCAAGCTCTTCTCTACTTCACTCAGGTAATTGATAAATATAAAGATTTTGCTTTCTCGGATTATGCCCGAGTAGGCA
GAGCATTGGCCCTGTACGAGATTGGTGACCGAGAAGAAGCCATTGCAGAGATGGAGGATGTTTCCATATCATTGAAGGGATATCCAGAAGTGCATGCGGCATTGGCTGCA
GCTTTATACGTGGATAAGCATGCTGCATTGCTGGCTGAAAATCAATTCACCATTGCAACCTTGCTTGATCCTCACTATGTGGATATCTCGTATGTGAAAGAAACAAAGCA
CTGGCCTCCTAGTTTGATCAGTTCTTTGCAACATTTCTTAACACTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAAAAAGAAATACACAATTTGATTCCAAAATTATATCTAAAGTATAAGCAATTTAGTATGGAAAATATGAAAATAAGGCTGAAGTTTTGCCACCAAAACAAACC
AACAGCCATGGGTTCTACAACTGCAAGACTGCTGATTCCTCATCTTCTTCTTCCCTCTTCTTCTTCTTCTTCTCACAATCCATCAACAAACACTCGCACCAAATCTTCAA
AACCCCTTTCATTTCCCAACCATAATTCATTACCAACCAGGCGTTTGTTGCTTTTCTCCCTCCCCATAGCCACTGCCTTTCTTCTCCCAATTCCGGGCAATCCAATTCAA
CCCAGTTCTTCCTTTGCTGTGGAGAGCTTTGACCCTGTCAGCCGTTCCGAGAAAGATGCCAGTGCCGCCATTTCACGAAGAGTATCTGAAGCTGTGGAGCTTCTCGATAA
AGGCAGGGAGTTGCAAGCTCTTGGTGATTTCAATCAAGCTCTTCTCTACTTCACTCAGGTAATTGATAAATATAAAGATTTTGCTTTCTCGGATTATGCCCGAGTAGGCA
GAGCATTGGCCCTGTACGAGATTGGTGACCGAGAAGAAGCCATTGCAGAGATGGAGGATGTTTCCATATCATTGAAGGGATATCCAGAAGTGCATGCGGCATTGGCTGCA
GCTTTATACGTGGATAAGCATGCTGCATTGCTGGCTGAAAATCAATTCACCATTGCAACCTTGCTTGATCCTCACTATGTGGATATCTCGTATGTGAAAGAAACAAAGCA
CTGGCCTCCTAGTTTGATCAGTTCTTTGCAACATTTCTTAACACTTTCTTAG
Protein sequenceShow/hide protein sequence
MRKKEIHNLIPKLYLKYKQFSMENMKIRLKFCHQNKPTAMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHNSLPTRRLLLFSLPIATAFLLPIPGNPIQ
PSSSFAVESFDPVSRSEKDASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAA
ALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS