; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G17212 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G17212
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionprotodermal factor 1-like isoform X2
Genome locationctg27:557503..559460
RNA-Seq ExpressionCucsat.G17212
SyntenyCucsat.G17212
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647347.1 hypothetical protein Csa_003649 [Cucumis sativus]7.03e-97100Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
        MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS

Query:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
        KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
Subjt:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
XP_011657562.2 protodermal factor 1 isoform X1 [Cucumis sativus]1.55e-96100Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
        MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS

Query:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
        KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
Subjt:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
XP_016900774.1 PREDICTED: protodermal factor 1-like isoform X1 [Cucumis melo]5.63e-9294.67Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
        MER+LASLLLWT+I+GLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPP+DSHG PPYG+PPPHGSG SHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS

Query:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
        KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGY SPPSHDPTPTPSTPTPS
Subjt:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
XP_016900775.1 PREDICTED: protodermal factor 1-like isoform X2 [Cucumis melo]4.69e-9294.67Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
        MER+LASLLLWT+I+GLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPP+DSHG PPYG+PPPHGSG SHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS

Query:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
        KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGY SPPSHDPTPTPSTPTPS
Subjt:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
XP_031743089.1 protodermal factor 1 isoform X2 [Cucumis sativus]8.58e-97100Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
        MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS

Query:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
        KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
Subjt:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
TrEMBL top hitse value%identityAlignment
A0A0A0KGQ1 Uncharacterized protein9.93e-97100Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
        MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS

Query:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
        KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
Subjt:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
A0A1S4DXR0 protodermal factor 1-like isoform X12.73e-9294.67Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
        MER+LASLLLWT+I+GLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPP+DSHG PPYG+PPPHGSG SHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS

Query:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
        KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGY SPPSHDPTPTPSTPTPS
Subjt:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
A0A1S4DYH9 protodermal factor 1-like isoform X22.27e-9294.67Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
        MER+LASLLLWT+I+GLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPP+DSHG PPYG+PPPHGSG SHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS

Query:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
        KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGY SPPSHDPTPTPSTPTPS
Subjt:  KPPTHDPTPSTPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS
A0A6J1D1H1 protodermal factor 1-like2.47e-6269.14Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS
        M R+LASLLLWTLI+GLVSQN+AIPLTSA NEDQK  YTPDP+ GSPP+ S G+PPYG+PPPHGSGGSHGGKPPSHGHGG KH PKPGNCGNPPYTPTPS
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS

Query:  KPPTHDPTPSTPSKPPSGGGGHHNPPT--------------GGGGYNSPPSHDPTPTPSTPT
        KPP             SGGGG+HNPPT               GGGY +PP++DPTPTPSTP+
Subjt:  KPPTHDPTPSTPSKPPSGGGGHHNPPT--------------GGGGYNSPPSHDPTPTPSTPT
A0A6J1EXH4 protodermal factor 1-like isoform X21.13e-5764.44Show/hide
Query:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSH-GNPPYGS-PPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPT
        M   LA LLLWTL +GLVS ++AIPLTS  +EDQKTYYTPDPHAGSPP+ S  G+PPYG+ PPP GSGGSHGGKPP+HGHGGKK  PKPGNCGNPP+TPT
Subjt:  MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSH-GNPPYGS-PPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPT

Query:  PSKPPT----------HDPTPSTPSKPPSGGGGHHNPPT------------------GGGGYNSPPSHDPTPTPSTPTPS
        PSKPP+          ++PTPS PS PPS GGG+++PP+                  GGGGY SPPS+DPTPTPSTPTPS
Subjt:  PSKPPT----------HDPTPSTPSKPPSGGGGHHNPPT------------------GGGGYNSPPSHDPTPTPSTPTPS
SwissProt top hitse value%identityAlignment
Q9S728 Protodermal factor 11.7e-0938.36Show/hide
Query:  RKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS--
        R + S  +W L   L+SQ +   + S   ED KTYY       SPP+ SHG PP                          H P   NCG+PPY P+PS  
Subjt:  RKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS--

Query:  ---KPPTHDPTPSTPSKPPSGGGGHHNPP--TGGGGYNSPPSHDPTP----TPSTPTPS
            PP+H PTPSTPS  P+     H P   T      SPPSH  TP    TPS PTPS
Subjt:  ---KPPTHDPTPSTPSKPPSGGGGHHNPP--TGGGGYNSPPSHDPTP----TPSTPTPS
Arabidopsis top hitse value%identityAlignment
AT2G42840.1 protodermal factor 11.2e-1038.36Show/hide
Query:  RKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS--
        R + S  +W L   L+SQ +   + S   ED KTYY       SPP+ SHG PP                          H P   NCG+PPY P+PS  
Subjt:  RKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPS--

Query:  ---KPPTHDPTPSTPSKPPSGGGGHHNPP--TGGGGYNSPPSHDPTP----TPSTPTPS
            PP+H PTPSTPS  P+     H P   T      SPPSH  TP    TPS PTPS
Subjt:  ---KPPTHDPTPSTPSKPPSGGGGHHNPP--TGGGGYNSPPSHDPTP----TPSTPTPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAAAACTAGCTTCTCTCCTTCTATGGACTCTAATTCTTGGGTTGGTTTCTCAAAACATAGCTATCCCTTTGACGTCTGCAGGCAATGAAGATCAGAAAACTTA
TTACACTCCAGACCCACATGCAGGAAGCCCGCCCACAGATTCACATGGGAATCCACCTTATGGATCTCCACCACCTCATGGTTCGGGAGGAAGCCATGGAGGAAAACCAC
CCTCTCATGGGCATGGTGGTAAGAAACACAAGCCAAAACCAGGGAACTGCGGCAACCCACCATACACTCCTACTCCGTCAAAACCTCCTACACACGATCCAACCCCATCA
ACTCCATCGAAGCCTCCTTCCGGTGGTGGTGGACATCACAACCCACCCACTGGTGGTGGTGGATACAACAGCCCTCCATCTCATGATCCCACTCCAACTCCATCTACTCC
AACGCCATCA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAAAACTAGCTTCTCTCCTTCTATGGACTCTAATTCTTGGGTTGGTTTCTCAAAACATAGCTATCCCTTTGACGTCTGCAGGCAATGAAGATCAGAAAACTTA
TTACACTCCAGACCCACATGCAGGAAGCCCGCCCACAGATTCACATGGGAATCCACCTTATGGATCTCCACCACCTCATGGTTCGGGAGGAAGCCATGGAGGAAAACCAC
CCTCTCATGGGCATGGTGGTAAGAAACACAAGCCAAAACCAGGGAACTGCGGCAACCCACCATACACTCCTACTCCGTCAAAACCTCCTACACACGATCCAACCCCATCA
ACTCCATCGAAGCCTCCTTCCGGTGGTGGTGGACATCACAACCCACCCACTGGTGGTGGTGGATACAACAGCCCTCCATCTCATGATCCCACTCCAACTCCATCTACTCC
AACGCCATCA
Protein sequenceShow/hide protein sequence
MERKLASLLLWTLILGLVSQNIAIPLTSAGNEDQKTYYTPDPHAGSPPTDSHGNPPYGSPPPHGSGGSHGGKPPSHGHGGKKHKPKPGNCGNPPYTPTPSKPPTHDPTPS
TPSKPPSGGGGHHNPPTGGGGYNSPPSHDPTPTPSTPTPS