; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G17246 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G17246
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationctg27:1172379..1178977
RNA-Seq ExpressionCucsat.G17246
SyntenyCucsat.G17246
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0032544 - plastid translation (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140097.1 ribosome-recycling factor, chloroplastic isoform X1 [Cucumis sativus]5.76e-185100Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_008449432.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X1 [Cucumis melo]9.77e-17795.68Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNRR VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_008449433.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X2 [Cucumis melo]1.82e-17495.32Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNR  VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_011657524.1 ribosome-recycling factor, chloroplastic isoform X2 [Cucumis sativus]2.16e-18299.64Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNR LVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_038888223.1 ribosome-recycling factor, chloroplastic isoform X1 [Benincasa hispida]8.57e-17493.59Show/hide
Query:  MATPFSATASIRRSLFQ---NPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL
        MATPFS+T S+RRS+FQ   NPPPK+LLSLRDYN GLNCVKCGS T HLCSWKSASNYVRL+RQALV+STQLSVSGN+ KNRR VVRAATIEEIEAEKTL
Subjt:  MATPFSATASIRRSLFQ---NPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL

Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ
        IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQ
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

TrEMBL top hitse value%identityAlignment
A0A0A0KJG4 Ribosome-recycling factor, chloroplastic2.79e-185100Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A1S3BMN4 Ribosome-recycling factor, chloroplastic4.73e-17795.68Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNRR VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A1S3BMY6 Ribosome-recycling factor, chloroplastic8.81e-17595.32Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNR  VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A6J1DZ32 Ribosome-recycling factor, chloroplastic1.17e-15486.79Show/hide
Query:  MATPFSATASIRRSLFQ--NPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLI
        MATPFS T S+R S+FQ  +   ++LLSLRDYNGGLNCVKCG  TAH+ SW SA+NYVRL R AL+IS+ + VSG++ KNRR VV+AATIEEIEAEKTLI
Subjt:  MATPFSATASIRRSLFQ--NPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLI

Query:  EKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQL
        EKDV++RMEKTIDTVRSNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQL
Subjt:  EKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A6J1ESI6 Ribosome-recycling factor, chloroplastic1.54e-15585.41Show/hide
Query:  MATPFSATASIRRSLF---QNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL
        MATPFS+T S+R S+F   Q PPPK+LLS+RDYN GLNC+KCGS T  L SWKSASNY+R+ R AL++ TQ   SGN+ K RR V+RAATIEEIEAEK L
Subjt:  MATPFSATASIRRSLF---QNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL

Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ
        IEKDV+ARMEKTIDTVRS+FNSIRTGR+NPAMLDKIEVEYYGSPV LKSIAQISTPDASSLL+QPYDKSSLKSIEKAIVNS+LGMTPNNDGEVIRLTLPQ
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY+KLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

SwissProt top hitse value%identityAlignment
A2YMU2 Ribosome-recycling factor, chloroplastic4.7e-7767.11Show/hide
Query:  SASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        S++N++ L    +   ++  +  N   ++R V+R ATIEEIEAEK++IE   + RMEK I+TV++NFN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  SASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDVLYKQKEKELLKV
        +DLQK+TD+YMKKI+ + KQKE+EL+K+
Subjt:  SDLQKLTDDYMKKIDVLYKQKEKELLKV

A3BLC3 Ribosome-recycling factor, chloroplastic4.7e-7767.11Show/hide
Query:  SASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        S++N++ L    +   ++  +  N   ++R V+R ATIEEIEAEK++IE   + RMEK I+TV++NFN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  SASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDVLYKQKEKELLKV
        +DLQK+TD+YMKKI+ + KQKE+EL+K+
Subjt:  SDLQKLTDDYMKKIDVLYKQKEKELLKV

P37706 Ribosome-recycling factor, chloroplastic (Fragment)3.2e-8169.2Show/hide
Query:  WKSASNYVRLN-------RQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSP
        W +A+NYV++        R+ +V+S          + R   ++ AT+EEIEAEK+LIEK VK RMEKTI+ V+++FNSIRT RSNP MLDKI+VEYYG+P
Subjt:  WKSASNYVRLN-------RQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSP

Query:  VSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKL
         SLKSIAQISTPD+SSLLV PYDKSSLK IEKAIVNSDLG+TPNNDG+VIRL++PQLT++RRKELSK+VAKQAEEGKVA+RNIRRDA+K+Y+KLEKEKKL
Subjt:  VSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKL

Query:  SEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        SEDNVKDLSSDLQK+ D+Y+KK+D ++KQKEKEL+ V
Subjt:  SEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

P82231 Ribosome-recycling factor, chloroplastic1.8e-8468.29Show/hide
Query:  GLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDK
        G++ ++C     ++  W+S++NYVR++      S + +V     +NR    R AT+EE+EAEK+LIE + K RMEKTI+T+RSNFNS+RT R++P MLD+
Subjt:  GLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDK

Query:  IEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY
        IEVEYYG+PVSLKSIAQISTPDASSLL+ PYDKSSLK+IEKAIV S LG++PNNDGEVIRL+LP LTS+RRKEL+KVV+K AEEGKVAVRNIRRDALK+Y
Subjt:  IEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY

Query:  EKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        EKLEKEKKLSEDNVKDLS+DLQKLTD+YMKK++ +YKQKE+EL+KV
Subjt:  EKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

Q9M1X0 Ribosome-recycling factor, chloroplastic3.3e-8667.49Show/hide
Query:  MATPFSATASIRRSL-FQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNR----RLVVRAATIEEIEAEK
        MA  FS+TA     L F+    K LLSL D         C  I +   S  +           L +   +++SG     R    RLV+R+ATIEEIEAEK
Subjt:  MATPFSATASIRRSL-FQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNR----RLVVRAATIEEIEAEK

Query:  TLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTL
        + IE DVK++MEKTI+T+R++FNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNSDLG+TPNNDG+VIRL+L
Subjt:  TLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTL

Query:  PQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        P LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ LYKQKEKEL+KV
Subjt:  PQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor2.6e-2235.96Show/hide
Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ
        ++    ++ME  ID +  +   +RTGR+ P MLD I VE  G  + L  +A +S  D  +L V PYD  ++K +EKAIV S LG+ P  DG+ +  ++P 
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKEL
        LT E  + + K+V K +E  K ++R  R+ AL   +K      L +D VK L  ++ +LT  ++K  + + K KEKE+
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKEL

AT3G63190.1 ribosome recycling factor, chloroplast precursor2.3e-8767.49Show/hide
Query:  MATPFSATASIRRSL-FQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNR----RLVVRAATIEEIEAEK
        MA  FS+TA     L F+    K LLSL D         C  I +   S  +           L +   +++SG     R    RLV+R+ATIEEIEAEK
Subjt:  MATPFSATASIRRSL-FQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNR----RLVVRAATIEEIEAEK

Query:  TLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTL
        + IE DVK++MEKTI+T+R++FNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNSDLG+TPNNDG+VIRL+L
Subjt:  TLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTL

Query:  PQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        P LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ LYKQKEKEL+KV
Subjt:  PQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCCCTTTCTCCGCCACCGCCTCTATCCGCCGTTCCCTCTTCCAGAATCCCCCTCCCAAATCCCTCCTCTCACTCCGAGATTATAATGGAGGGTTAAATTGCGT
CAAATGCGGCTCCATTACTGCGCATCTTTGTTCATGGAAGTCAGCTTCCAACTACGTCAGGCTCAACCGACAAGCCCTAGTGATTTCTACCCAACTCTCTGTTTCTGGGA
ATGTGTTCAAAAACAGAAGGTTAGTTGTGAGGGCTGCAACAATCGAAGAAATTGAAGCAGAGAAAACATTGATCGAGAAAGATGTAAAAGCAAGAATGGAAAAGACCATC
GATACTGTTCGGTCTAATTTCAATTCAATTAGGACTGGGAGATCAAATCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCAT
TGCTCAAATTAGTACACCTGATGCAAGCTCACTCTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGAATGACTC
CAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACGTCCGAAAGAAGAAAGGAGCTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGAAAGGTGGCA
GTAAGGAATATAAGAAGAGATGCTTTAAAAGCGTATGAAAAATTGGAAAAGGAGAAAAAACTTTCGGAAGATAATGTTAAGGACTTGTCAAGTGATTTGCAGAAACTGAC
CGATGACTATATGAAGAAGATTGATGTCTTATACAAGCAAAAAGAGAAGGAATTGTTGAAGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCCCTTTCTCCGCCACCGCCTCTATCCGCCGTTCCCTCTTCCAGAATCCCCCTCCCAAATCCCTCCTCTCACTCCGAGATTATAATGGAGGGTTAAATTGCGT
CAAATGCGGCTCCATTACTGCGCATCTTTGTTCATGGAAGTCAGCTTCCAACTACGTCAGGCTCAACCGACAAGCCCTAGTGATTTCTACCCAACTCTCTGTTTCTGGGA
ATGTGTTCAAAAACAGAAGGTTAGTTGTGAGGGCTGCAACAATCGAAGAAATTGAAGCAGAGAAAACATTGATCGAGAAAGATGTAAAAGCAAGAATGGAAAAGACCATC
GATACTGTTCGGTCTAATTTCAATTCAATTAGGACTGGGAGATCAAATCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCAT
TGCTCAAATTAGTACACCTGATGCAAGCTCACTCTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGAATGACTC
CAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACGTCCGAAAGAAGAAAGGAGCTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGAAAGGTGGCA
GTAAGGAATATAAGAAGAGATGCTTTAAAAGCGTATGAAAAATTGGAAAAGGAGAAAAAACTTTCGGAAGATAATGTTAAGGACTTGTCAAGTGATTTGCAGAAACTGAC
CGATGACTATATGAAGAAGATTGATGTCTTATACAAGCAAAAAGAGAAGGAATTGTTGAAGGTATGA
Protein sequenceShow/hide protein sequence
MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTI
DTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVA
VRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV