; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G17249 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G17249
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNascent polypeptide-associated complex subunit alpha, muscle-specific form
Genome locationctg27:1206811..1209696
RNA-Seq ExpressionCucsat.G17249
SyntenyCucsat.G17249
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057315.1 nascent polypeptide-associated complex subunit alpha, muscle-specific form [Cucumis melo var. makuwa]6.74e-10895.15Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN
        MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDF GMNCRSFQSGAGILPTPLKAC SETEHFYPSPKTPPP LTSNSENRKQLAT RS PI IKPK SN
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN

Query:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK
        QSN FHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK
Subjt:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK

KAG6571464.1 hypothetical protein SDJN03_28192, partial [Cucurbita argyrosperma subsp. sororia]3.49e-11380.49Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPS-PKTPPPCLTSNSENRKQLATMRSTPIPIKPKSS
        MEAV+V+EQHRNQYY R++PHGPARF S  SRDFRGMNCRSFQSGAGILPTPLKAC S T+H YPS PKTPP CL+SN+ N KQLA+++S PIPI  K S
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPS-PKTPPPCLTSNSENRKQLATMRSTPIPIKPKSS

Query:  NQSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNL
        N+++A HEEFYDR+FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLEL RSAPEFEMH PSAKSAPPSPTR+   S+RF FHSADSATKTLRRILNL
Subjt:  NQSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNL

Query:  DVANE
        DV NE
Subjt:  DVANE

KGN47907.1 hypothetical protein Csa_004001 [Cucumis sativus]5.69e-14699.51Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN
        MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRS PIPIKPKSSN
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN

Query:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD
        QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD
Subjt:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD

Query:  VANE
        VANE
Subjt:  VANE

TYK13420.1 nascent polypeptide-associated complex subunit alpha, muscle-specific form [Cucumis melo var. makuwa]2.02e-10895.15Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN
        MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDF GMNCRSFQSGAGILPTPLKAC SETEHFYPSPKTPPP LTSNSENRKQLAT RS PI IKPK SN
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN

Query:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK
        QSN FHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK
Subjt:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK

XP_016900729.1 PREDICTED: uncharacterized protein LOC107990294 [Cucumis melo]1.62e-13694.61Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN
        MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDF GMNCRSFQSGAGILPTPLKAC SETEHFYPSPKTPPP LTSNSENRKQLAT RS PI IKPK SN
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN

Query:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD
        QSN FHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQ+FSAR+FFHSADSATKTLRRILNLD
Subjt:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD

Query:  VANE
        V NE
Subjt:  VANE

TrEMBL top hitse value%identityAlignment
A0A0A0KHP6 Uncharacterized protein2.75e-14699.51Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN
        MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRS PIPIKPKSSN
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN

Query:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD
        QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD
Subjt:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD

Query:  VANE
        VANE
Subjt:  VANE

A0A1S4DXL6 uncharacterized protein LOC1079902947.83e-13794.61Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN
        MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDF GMNCRSFQSGAGILPTPLKAC SETEHFYPSPKTPPP LTSNSENRKQLAT RS PI IKPK SN
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN

Query:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD
        QSN FHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQ+FSAR+FFHSADSATKTLRRILNLD
Subjt:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLD

Query:  VANE
        V NE
Subjt:  VANE

A0A5A7UUU2 Nascent polypeptide-associated complex subunit alpha, muscle-specific form3.26e-10895.15Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN
        MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDF GMNCRSFQSGAGILPTPLKAC SETEHFYPSPKTPPP LTSNSENRKQLAT RS PI IKPK SN
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN

Query:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK
        QSN FHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK
Subjt:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK

A0A5D3CPQ8 Nascent polypeptide-associated complex subunit alpha, muscle-specific form9.80e-10995.15Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN
        MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDF GMNCRSFQSGAGILPTPLKAC SETEHFYPSPKTPPP LTSNSENRKQLAT RS PI IKPK SN
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSN

Query:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK
        QSN FHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK
Subjt:  QSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAK

A0A6P4A757 uncharacterized protein LOC1074259501.52e-7262.94Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSE-TEHFYPSPKTPPPCLTSNSENR-KQLATMRSTPIPIKPKS
        ME +VV+ QHRNQYY R KP GPAR+GS  SRDFRG+NCRSFQS AG+LPTP KAC S  ++    SPKTP P L S+++N+ + L   +STPI I   +
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSE-TEHFYPSPKTPPPCLTSNSENR-KQLATMRSTPIPIKPKS

Query:  SNQSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVA-KRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLR
        S++   F EE  + + SFSELWAGP YSNSPPPSSLPIPKFSV  KRT SLEL  SAPE EMH P AKSAPPSPTR+ N S R  F SA+ ATKTL+
Subjt:  SNQSNAFHEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVA-KRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02715.1 unknown protein5.6e-3043.27Show/hide
Query:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETE----HFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKP
        ME ++V  +HR+QYY + K  G  RF S  S+ FR +NCR+FQSG G+LP P +  ++           SP++P   L     +   + + R++PIPI  
Subjt:  MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETE----HFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKP

Query:  KSSNQSNAFHEEFYD--RSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMH-HPSAKSAPPSPTRDQNFSARFFFHSADSATKTL
           +Q      EF D  RS S+SELWAGPTYSNSPPP+S+PIPKFS+ ++ T + L   AP+  +     AKSAP SPT     S    F S  SAT TL
Subjt:  KSSNQSNAFHEEFYD--RSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMH-HPSAKSAPPSPTRDQNFSARFFFHSADSATKTL

Query:  RRILNLDV
        RR+LNL++
Subjt:  RRILNLDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGTGGTTGTTATTGAGCAGCATAGGAACCAATATTATGATCGAGTCAAGCCACATGGCCCAGCTCGATTTGGATCACTCCGATCCCGAGATTTCAGAGGGAT
GAATTGTAGGAGTTTCCAATCGGGAGCTGGAATCCTTCCAACGCCTTTGAAGGCTTGTAACTCTGAAACCGAACATTTCTACCCATCTCCTAAAACACCCCCACCTTGTT
TAACTTCCAACTCTGAAAATAGAAAACAACTTGCTACTATGAGAAGTACCCCAATTCCTATCAAACCCAAATCGTCAAACCAGAGTAATGCTTTCCATGAAGAATTCTAT
GATAGGAGTTTCTCGTTTTCTGAGCTTTGGGCTGGACCCACTTACTCAAATTCACCACCTCCTAGTTCATTGCCTATTCCCAAATTTTCAGTTGCTAAGAGAACTACATC
ACTGGAGTTGGCTCGTTCTGCCCCTGAATTTGAAATGCATCATCCATCTGCTAAGTCTGCACCTCCATCCCCAACTCGAGACCAAAACTTTTCCGCCAGATTTTTCTTTC
ATAGTGCTGACTCTGCGACTAAGACTCTACGTCGCATTCTTAATCTCGATGTTGCCAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAGTGGTTGTTATTGAGCAGCATAGGAACCAATATTATGATCGAGTCAAGCCACATGGCCCAGCTCGATTTGGATCACTCCGATCCCGAGATTTCAGAGGGAT
GAATTGTAGGAGTTTCCAATCGGGAGCTGGAATCCTTCCAACGCCTTTGAAGGCTTGTAACTCTGAAACCGAACATTTCTACCCATCTCCTAAAACACCCCCACCTTGTT
TAACTTCCAACTCTGAAAATAGAAAACAACTTGCTACTATGAGAAGTACCCCAATTCCTATCAAACCCAAATCGTCAAACCAGAGTAATGCTTTCCATGAAGAATTCTAT
GATAGGAGTTTCTCGTTTTCTGAGCTTTGGGCTGGACCCACTTACTCAAATTCACCACCTCCTAGTTCATTGCCTATTCCCAAATTTTCAGTTGCTAAGAGAACTACATC
ACTGGAGTTGGCTCGTTCTGCCCCTGAATTTGAAATGCATCATCCATCTGCTAAGTCTGCACCTCCATCCCCAACTCGAGACCAAAACTTTTCCGCCAGATTTTTCTTTC
ATAGTGCTGACTCTGCGACTAAGACTCTACGTCGCATTCTTAATCTCGATGTTGCCAATGAATGA
Protein sequenceShow/hide protein sequence
MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSETEHFYPSPKTPPPCLTSNSENRKQLATMRSTPIPIKPKSSNQSNAFHEEFY
DRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADSATKTLRRILNLDVANE