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Cucsat.G17418 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G17418
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionhistone H4
Genome locationctg27:1924995..1926512
RNA-Seq ExpressionCucsat.G17418
SyntenyCucsat.G17418
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005694 - chromosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR001951 - Histone H4
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2633546.1 unnamed protein product [Spirodela intermedia]4.21e-1149.37Show/hide
Query:  PFAVARFFFYTKNFHQSKQQCPTEGKEEKVLKRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        P   AR    T   HQ+    P          R R+  VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  PFAVARFFFYTKNFHQSKQQCPTEGKEEKVLKRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

KNE97772.1 hypothetical protein PSTG_08989 [Puccinia striiformis f. sp. tritici PST-78]6.88e-1166.67Show/hide
Query:  KRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        KR +   VLKIFLKN IR+ VTYTEH  QKT T++DV YAL RQG+TL
Subjt:  KRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

XP_023750917.1 histone H4 [Lactuca sativa]5.52e-1171.74Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IRN VTYTEH  QKT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

XP_031094812.1 histone H4-like [Ipomoea triloba]1.38e-1171.74Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR++VTYTEH  +KT TTMDVAYAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

XP_037977275.1 histone H4-like [Plutella xylostella]1.95e-1149.37Show/hide
Query:  ARFFFYTKNFHQSKQQ--CPTEGKEEKV--LKRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
         RFF  T    QS+    C   G  +++  L  E    VLK+FL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ARFFFYTKNFHQSKQQ--CPTEGKEEKV--LKRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

TrEMBL top hitse value%identityAlignment
A0A0L0VEN7 Histone H43.33e-1166.67Show/hide
Query:  KRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        KR +   VLKIFLKN IR+ VTYTEH  QKT T++DV YAL RQG+TL
Subjt:  KRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

A0A2J6M6J3 Histone H42.67e-1171.74Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IRN VTYTEH  QKT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

A0A3B1KGY6 Histone H43.78e-1150Show/hide
Query:  KNFHQSKQQCPTEGKEEKVLKRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        K   + K++   + K++K  + E    VLK+FL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  KNFHQSKQQCPTEGKEEKVLKRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

A0A7I8JR74 Hypothetical protein2.04e-1149.37Show/hide
Query:  PFAVARFFFYTKNFHQSKQQCPTEGKEEKVLKRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        P   AR    T   HQ+    P          R R+  VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  PFAVARFFFYTKNFHQSKQQCPTEGKEEKVLKRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

Q6DQL4 Histone H43.78e-1169.57Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KTGT MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

SwissProt top hitse value%identityAlignment
P59259 Histone H41.1e-0867.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

P62785 Histone H4 variant TH0111.1e-0867.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

P62786 Histone H4 variant TH0911.1e-0867.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

Q6PMI5 Histone H41.1e-0867.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

Q6WZ83 Histone H41.1e-0867.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

Arabidopsis top hitse value%identityAlignment
AT1G07660.1 Histone superfamily protein7.6e-1067.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

AT1G07660.2 Histone superfamily protein7.6e-1067.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

AT1G07820.1 Histone superfamily protein7.6e-1067.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

AT1G07820.2 Histone superfamily protein7.6e-1067.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL

AT2G28740.1 histone H47.6e-1067.39Show/hide
Query:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL
        E    VLKIFL+N IR+ VTYTEH  +KT T MDV YAL RQGRTL
Subjt:  ERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATATTCCCAAATTTCCTTTTCCCACCAAATTTCTTAACAAATTCATTTTTCCACTATTCCTCCTCTTCTTCACATGCATTATACTTAACCCTTTTGCGGTTGCACGATT
TTTCTTCTACACAAAAAATTTCCACCAATCCAAGCAACAATGTCCAACAGAGGGAAAGGAGGAAAAGGTCTTGAAAAGGGAAAGAAACTCGAATGTTCTCAAGATCTTCC
TAAAAAATTTCATTCGCAACATCGTCACTTACACTGAGCACACTCTCCAGAAGACTGGCACCACCATGGATGTTGCGTACGCGCTCAATAGGCAAGGACGTACTCTATAA
mRNA sequenceShow/hide mRNA sequence
CATATTCCCAAATTTCCTTTTCCCACCAAATTTCTTAACAAATTCATTTTTCCACTATTCCTCCTCTTCTTCACATGCATTATACTTAACCCTTTTGCGGTTGCACGATT
TTTCTTCTACACAAAAAATTTCCACCAATCCAAGCAACAATGTCCAACAGAGGGAAAGGAGGAAAAGGTCTTGAAAAGGGAAAGAAACTCGAATGTTCTCAAGATCTTCC
TAAAAAATTTCATTCGCAACATCGTCACTTACACTGAGCACACTCTCCAGAAGACTGGCACCACCATGGATGTTGCGTACGCGCTCAATAGGCAAGGACGTACTCTATAA
Protein sequenceShow/hide protein sequence
HIPKFPFPTKFLNKFIFPLFLLFFTCIILNPFAVARFFFYTKNFHQSKQQCPTEGKEEKVLKRERNSNVLKIFLKNFIRNIVTYTEHTLQKTGTTMDVAYALNRQGRTL