; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G17528 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G17528
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description40S ribosomal protein S26
Genome locationctg278:319383..321384
RNA-Seq ExpressionCucsat.G17528
SyntenyCucsat.G17528
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0019430 - removal of superoxide radicals (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004784 - superoxide dismutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000892 - Ribosomal protein S26e
IPR038551 - Ribosomal protein S26e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599946.1 40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia]7.68e-8492.54Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQ------APRPVGAGNPTR
        F+RRR+DQ KPGQPGQ      APRPVGAGNP R
Subjt:  FIRRREDQAKPGQPGQ------APRPVGAGNPTR

XP_004146441.1 40S ribosomal protein S26-1 [Cucumis sativus]4.78e-8899.22Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPTR
        FIRRREDQAKPGQPGQAPRPVGAGNP R
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPTR

XP_022941874.1 40S ribosomal protein S26-3-like [Cucurbita moschata]2.42e-8494.66Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQ---APRPVGAGNPTR
        F+RRR+DQ KPGQPGQ   APRPVGAGNP R
Subjt:  FIRRREDQAKPGQPGQ---APRPVGAGNPTR

XP_022943123.1 40S ribosomal protein S26-1-like [Cucurbita moschata]7.63e-8596.09Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPTR
        FIRRR+DQ KPGQPGQAPRP GAG P R
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPTR

XP_023529394.1 40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo]7.63e-8596.09Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPTR
        FIRRR+DQ KPGQPGQAPRP GAG P R
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPTR

TrEMBL top hitse value%identityAlignment
A0A0A0KM45 40S ribosomal protein S262.31e-8899.22Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPTR
        FIRRREDQAKPGQPGQAPRPVGAGNP R
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPTR

A0A1S3C5M1 40S ribosomal protein S262.31e-8899.22Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPTR
        FIRRREDQAKPGQPGQAPRPVGAGNP R
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPTR

A0A5A7VIJ0 40S ribosomal protein S262.31e-8899.22Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPTR
        FIRRREDQAKPGQPGQAPRPVGAGNP R
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPTR

A0A6J1FWD9 40S ribosomal protein S263.70e-8596.09Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPTR
        FIRRR+DQ KPGQPGQAPRP GAG P R
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPTR

A0A6J1JIN0 40S ribosomal protein S263.70e-8596.09Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPTR
        FIRRR+DQ KPGQPGQAPRP GAG P R
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPTR

SwissProt top hitse value%identityAlignment
O45499 40S ribosomal protein S262.0e-3868.33Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRP
        F  +R   A+PG PG  PRP
Subjt:  FIRRREDQAKPGQPGQAPRP

P49206 40S ribosomal protein S26-19.0e-5584.68Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAG
        F RR+ED  KPGQPGQAPRP G G
Subjt:  FIRRREDQAKPGQPGQAPRPVGAG

P49216 40S ribosomal protein S262.1e-4876.38Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R+PP+R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQP-GQAPRPVGAGNP
        F RRRED+ +  +P G AP P GA  P
Subjt:  FIRRREDQAKPGQP-GQAPRPVGAGNP

Q8LPJ7 40S ribosomal protein S26-29.0e-5584.68Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAG
        F RR+ED  KPGQPGQAPRP G G
Subjt:  FIRRREDQAKPGQPGQAPRPVGAG

Q9LYK9 40S ribosomal protein S26-33.4e-5485.25Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVG
        F RR+ED  KP QPGQAPRP G
Subjt:  FIRRREDQAKPGQPGQAPRPVG

Arabidopsis top hitse value%identityAlignment
AT2G40510.1 Ribosomal protein S26e family protein6.4e-5684.68Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAG
        F RR+ED  KPGQPGQAPRP G G
Subjt:  FIRRREDQAKPGQPGQAPRPVGAG

AT2G40590.1 Ribosomal protein S26e family protein6.4e-5684.68Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAG
        F RR+ED  KPGQPGQAPRP G G
Subjt:  FIRRREDQAKPGQPGQAPRPVGAG

AT3G56340.1 Ribosomal protein S26e family protein2.4e-5585.25Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVG
        F RR+ED  KP QPGQAPRP G
Subjt:  FIRRREDQAKPGQPGQAPRPVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTCAAGCGCAGGAACGGCGGACGTAACAAGCACGGCCGTGGACACGTTAAGTTCATTCGCTGCTCCAACTGCGGGAAATGCTGCCCTAAGGACAAGGCTATTAA
GAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTTCAAGAAGCCTGTGTCTATGACCAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACT
GTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGCACTGATAGAAGAAATCGACAACCACCACAGCGTTTCATCAGACGCAGGGAGGATCAGGCAAAG
CCCGGTCAGCCAGGTCAAGCACCTCGTCCTGTTGGAGCTGGAAATCCTACTCGTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTCAAGCGCAGGAACGGCGGACGTAACAAGCACGGCCGTGGACACGTTAAGTTCATTCGCTGCTCCAACTGCGGGAAATGCTGCCCTAAGGACAAGGCTATTAA
GAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTTCAAGAAGCCTGTGTCTATGACCAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACT
GTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGCACTGATAGAAGAAATCGACAACCACCACAGCGTTTCATCAGACGCAGGGAGGATCAGGCAAAG
CCCGGTCAGCCAGGTCAAGCACCTCGTCCTGTTGGAGCTGGAAATCCTACTCGTGCATAA
Protein sequenceShow/hide protein sequence
MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAK
PGQPGQAPRPVGAGNPTRA