; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G17949 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G17949
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionexosome complex component RRP41-like
Genome locationctg3345:1774788..1778497
RNA-Seq ExpressionCucsat.G17949
SyntenyCucsat.G17949
Gene Ontology termsGO:0009845 - seed germination (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0071051 - polyadenylation-dependent snoRNA 3'-end processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570792.1 Exosome complex component RRP41-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.77e-16993.02Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKATP T+TYSPSPT HKTRP +FR+DDV+WVRPDGR FHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        FSTPVRGQGSENK+FSSMLHK+LEGAIILE+FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID  LEEENYQDGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV IMRSCLKESA T+SEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

XP_004145749.1 exosome complex component RRP41-like [Cucumis sativus]1.32e-180100Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

XP_008463959.1 PREDICTED: exosome complex component RRP41-like [Cucumis melo]2.96e-17597.3Show/hide
Query:  MAKKATPTTTT-YSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT
        MAKKATPTTTT YSPSPTVHKTRP LFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT
Subjt:  MAKKATPTTTT-YSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT

Query:  TFSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDG
        TFSTPVRGQGSENK+FSSMLHKSLEGAIILE+FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID +LEEENYQDG
Subjt:  TFSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDG

Query:  SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESA TISEE
Subjt:  SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

XP_022986160.1 exosome complex component RRP41-like [Cucurbita maxima]1.77e-16993.02Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKATP T+TYSPSPT HKTRP +FR+DDV+WVRPDGR FHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        FSTPVRGQGSENK+FSSMLHK+LEGAIILE+FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID  LEEENYQDGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV IMRSCLKESA T+SEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

XP_038900607.1 exosome complex component RRP41-like isoform X1 [Benincasa hispida]6.18e-17093.8Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKATPTTTTYSPSPT+ KTRP +FRT DV+WVR DGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        FSTPVRGQGSENK+FSSMLHK+LEGAI+LE+FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID  LEEENYQDGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLVEIMRSCLKESA TISEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

TrEMBL top hitse value%identityAlignment
A0A0A0KEK6 Uncharacterized protein6.39e-181100Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

A0A1S3CKF3 exosome complex component RRP41-like1.44e-17597.3Show/hide
Query:  MAKKATPTTTT-YSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT
        MAKKATPTTTT YSPSPTVHKTRP LFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT
Subjt:  MAKKATPTTTT-YSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT

Query:  TFSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDG
        TFSTPVRGQGSENK+FSSMLHKSLEGAIILE+FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID +LEEENYQDG
Subjt:  TFSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDG

Query:  SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESA TISEE
Subjt:  SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

A0A6J1CHT0 exosome complex component RRP41-like7.93e-16891.86Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKATP TTTYSPSPT+HKTRP +FR+D+ +WVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        F+TPVRGQGSENK+FSSMLHK+LEGAIILE+FPKTTVD+FALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID +LEEENYQDGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV+IMRSCLKESA TIS++
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

A0A6J1FYV1 exosome complex component RRP41-like8.58e-17093.02Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKATP TTTYSPSPT HKTRP +FR+DDV+WVRPDGR FHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        FSTPVRGQGSENK+FSSMLHK+LEGAII E+FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID  LEEENYQDGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV IMRSCLKESA T+SEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

A0A6J1JDA9 exosome complex component RRP41-like8.58e-17093.02Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKATP T+TYSPSPT HKTRP +FR+DDV+WVRPDGR FHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        FSTPVRGQGSENK+FSSMLHK+LEGAIILE+FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID  LEEENYQDGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV IMRSCLKESA T+SEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

SwissProt top hitse value%identityAlignment
A2RVK7 Exosome complex component RRP41-like5.1e-10271.98Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MA K    T TYSP   V ++R  +F+  D++W RPDGRGFHQCRPA  +TGAV++ASGSAYAEFGNTKVIVSVFGPRESKKAM+YSD+GRLNC+VSYT 
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        F++P  GQG+++K++SSMLHK+LEG I++E+FPKTTVDVFALVLESGGSDL V+ISCASLALADAGIM+YDL+ +VSVSC GK+L+ID V EEE  +DGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISE
         M+TCMPSRYE+TQLTITGEWTT  INE MQLCLDAS KL EIMR CLK+SA    E
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISE

B6YSI2 Exosome complex component Rrp412.2e-2832.78Show/hide
Query:  RPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKDFSS
        +P   +  D N  R DGR  ++ RP     G +  A GSAY E+G  K++ +V+GPRE   K +   D   L    +   FS   R   G    + + S 
Subjt:  RPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKDFSS

Query:  MLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTI
        ++  +LE A+ILE FP+T +D+F  VL++        I+ ASLALADAGI + DLVA+ +       +++D   EE+NY +  + +  MP + ++T L +
Subjt:  MLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTI

Query:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
         G  T  +  E ++L +  +  + +  R  LKE  + I+EE
Subjt:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

O59223 Exosome complex component Rrp411.3e-2833.2Show/hide
Query:  RPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKDFSS
        +P   +  D N  R DGR  ++ RP   + G +  A+GSAY E+G  K+I +V+GPRE   K +   D   L    +   FS   R   G    + + S 
Subjt:  RPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKDFSS

Query:  MLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTI
        ++  +LE A+ILE FP+T++DVF  VL++        I+ ASLALADAGI + DLVA+ +       +++D   EE+NY +  + +  MP + ++T L +
Subjt:  MLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTI

Query:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
         G  T  +  E ++L +  +  + +  R  LKE  + I++E
Subjt:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

Q6P0I8 Exosome complex component MTR31.1e-3037.84Show/hide
Query:  RGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMMYSDIGRLNCSVSYTTFSTPVRG---QGSENKDFSSMLHKSLEGAIILESFPK
        RG    RP F R G V+ A GSAY E GNTK+I SV+GP+E+ ++       GRL C      FS   RG   QGSE +D S+ L +SL   + L  +P+
Subjt:  RGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMMYSDIGRLNCSVSYTTFSTPVRG---QGSENKDFSSMLHKSLEGAIILESFPK

Query:  TTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEE------ENYQD--GSLMITCMPSRYEVTQLTITGEWTTSKI
        + +DV  +VLE+ GS L   ++CAS+ALADAGI +YD+V   ++   G   L+D    E      E Y D  G + +  +P+  +V+ L   GE     +
Subjt:  TTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEE------ENYQD--GSLMITCMPSRYEVTQLTITGEWTTSKI

Query:  NEGMQLCLDASCKLVEIMRSCL
         E M+ C+D   KL  +++  L
Subjt:  NEGMQLCLDASCKLVEIMRSCL

Q8U0L9 Exosome complex component Rrp417.6e-2933.61Show/hide
Query:  RPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKDFSS
        +P   +  D N  R DGR  ++ RP   + G +  A+GSAY E+G  K+I +V+GPRE   K +   D   L    +   FS   R   G    + + S 
Subjt:  RPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKDFSS

Query:  MLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTI
        ++  +LE A+ILE FP+T +DVF  VL++        I+ ASLALADAGI + DLVA+ S       +++D   EE+NY +  + +  MP + ++T L +
Subjt:  MLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTI

Query:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE
         G  T  +  E ++L +  +  + +  R  LKE  + I++E
Subjt:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE

Arabidopsis top hitse value%identityAlignment
AT3G46210.1 Ribosomal protein S5 domain 2-like superfamily protein2.8e-1030.06Show/hide
Query:  RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQ-GSENKDFSSMLHKSLEGAIILESFP
        R DGR  +Q RP       ++   GSA    G+TKV+ +V+GP+   K    ++         +     P  GQ G   K++  +L ++++   +L   P
Subjt:  RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQ-GSENKDFSSMLHKSLEGAIILESFP

Query:  KTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKN--LLIDTVLEEE
         TT  V   V+   GS LP  I+ A  AL DAGI +  L  ++   C  +N  L++D    EE
Subjt:  KTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKN--LLIDTVLEEE

AT3G46210.2 Ribosomal protein S5 domain 2-like superfamily protein2.8e-1030.06Show/hide
Query:  RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQ-GSENKDFSSMLHKSLEGAIILESFP
        R DGR  +Q RP       ++   GSA    G+TKV+ +V+GP+   K    ++         +     P  GQ G   K++  +L ++++   +L   P
Subjt:  RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQ-GSENKDFSSMLHKSLEGAIILESFP

Query:  KTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKN--LLIDTVLEEE
         TT  V   V+   GS LP  I+ A  AL DAGI +  L  ++   C  +N  L++D    EE
Subjt:  KTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKN--LLIDTVLEEE

AT3G61620.1 3'-5'-exoribonuclease family protein6.0e-2130.04Show/hide
Query:  VRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMMYSDIGRLNCSVSYTTFSTPVRGQ---GSENKDFSSMLHKSLEGAII
        +R DGR F++ R      G V+ A GSA  E GNTKVI +V+GPRE  +K     +D   + C  S   FST  R +      + + S ++ +++E  I+
Subjt:  VRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMMYSDIGRLNCSVSYTTFSTPVRGQ---GSENKDFSSMLHKSLEGAII

Query:  LESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTITGEWTTSKINE
         E  P + +D+F  VL++ G      I+ A+LALADAGI + DL  S S        L+D    E++     + +  +P   +V+ L +  +        
Subjt:  LESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTITGEWTTSKINE

Query:  GMQLCLDASCKLVEIMRSCLKES
           L  +    + E +R  L+E+
Subjt:  GMQLCLDASCKLVEIMRSCLKES

AT3G61620.2 3'-5'-exoribonuclease family protein6.0e-2130.04Show/hide
Query:  VRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMMYSDIGRLNCSVSYTTFSTPVRGQ---GSENKDFSSMLHKSLEGAII
        +R DGR F++ R      G V+ A GSA  E GNTKVI +V+GPRE  +K     +D   + C  S   FST  R +      + + S ++ +++E  I+
Subjt:  VRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMMYSDIGRLNCSVSYTTFSTPVRGQ---GSENKDFSSMLHKSLEGAII

Query:  LESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTITGEWTTSKINE
         E  P + +D+F  VL++ G      I+ A+LALADAGI + DL  S S        L+D    E++     + +  +P   +V+ L +  +        
Subjt:  LESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTITGEWTTSKINE

Query:  GMQLCLDASCKLVEIMRSCLKES
           L  +    + E +R  L+E+
Subjt:  GMQLCLDASCKLVEIMRSCLKES

AT4G27490.1 3'-5'-exoribonuclease family protein3.7e-10371.98Show/hide
Query:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MA K    T TYSP   V ++R  +F+  D++W RPDGRGFHQCRPA  +TGAV++ASGSAYAEFGNTKVIVSVFGPRESKKAM+YSD+GRLNC+VSYT 
Subjt:  MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS
        F++P  GQG+++K++SSMLHK+LEG I++E+FPKTTVDVFALVLESGGSDL V+ISCASLALADAGIM+YDL+ +VSVSC GK+L+ID V EEE  +DGS
Subjt:  FSTPVRGQGSENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISE
         M+TCMPSRYE+TQLTITGEWTT  INE MQLCLDAS KL EIMR CLK+SA    E
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAAAAGCGACACCAACTACCACAACGTATTCTCCGTCTCCTACTGTCCACAAAACCAGGCCATCCCTCTTCAGAACCGATGACGTCAACTGGGTTCGCCCCGA
TGGCCGTGGCTTCCATCAATGCCGCCCTGCTTTTTTCAGGACTGGAGCTGTAAATGCTGCTTCAGGATCTGCTTATGCAGAATTCGGTAATACCAAGGTCATTGTTTCTG
TATTTGGCCCCCGAGAAAGTAAGAAAGCAATGATGTACAGTGATATTGGCCGGCTCAATTGTAGTGTTAGTTATACAACATTTTCCACTCCAGTTCGTGGACAGGGATCG
GAAAACAAGGACTTCTCCTCAATGTTACATAAATCTTTGGAAGGGGCAATAATATTGGAATCATTCCCCAAAACAACAGTGGACGTATTTGCCTTGGTGTTGGAATCTGG
AGGCAGTGATCTTCCTGTTGTAATATCATGTGCCAGTCTTGCTCTTGCTGATGCTGGAATTATGCTTTATGATCTTGTTGCCTCAGTTTCTGTGAGCTGCTTTGGCAAGA
ATCTTCTTATTGATACTGTTTTGGAAGAAGAAAACTACCAAGATGGAAGTCTTATGATAACTTGTATGCCATCTCGTTACGAAGTCACTCAGCTCACAATCACAGGTGAA
TGGACAACTTCTAAAATTAATGAGGGTATGCAACTTTGCCTTGATGCTTCATGCAAGCTTGTGGAGATCATGAGATCATGCTTGAAGGAATCTGCCGTCACCATTTCAGA
GGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAAAAGCGACACCAACTACCACAACGTATTCTCCGTCTCCTACTGTCCACAAAACCAGGCCATCCCTCTTCAGAACCGATGACGTCAACTGGGTTCGCCCCGA
TGGCCGTGGCTTCCATCAATGCCGCCCTGCTTTTTTCAGGACTGGAGCTGTAAATGCTGCTTCAGGATCTGCTTATGCAGAATTCGGTAATACCAAGGTCATTGTTTCTG
TATTTGGCCCCCGAGAAAGTAAGAAAGCAATGATGTACAGTGATATTGGCCGGCTCAATTGTAGTGTTAGTTATACAACATTTTCCACTCCAGTTCGTGGACAGGGATCG
GAAAACAAGGACTTCTCCTCAATGTTACATAAATCTTTGGAAGGGGCAATAATATTGGAATCATTCCCCAAAACAACAGTGGACGTATTTGCCTTGGTGTTGGAATCTGG
AGGCAGTGATCTTCCTGTTGTAATATCATGTGCCAGTCTTGCTCTTGCTGATGCTGGAATTATGCTTTATGATCTTGTTGCCTCAGTTTCTGTGAGCTGCTTTGGCAAGA
ATCTTCTTATTGATACTGTTTTGGAAGAAGAAAACTACCAAGATGGAAGTCTTATGATAACTTGTATGCCATCTCGTTACGAAGTCACTCAGCTCACAATCACAGGTGAA
TGGACAACTTCTAAAATTAATGAGGGTATGCAACTTTGCCTTGATGCTTCATGCAAGCTTGTGGAGATCATGAGATCATGCTTGAAGGAATCTGCCGTCACCATTTCAGA
GGAATAA
Protein sequenceShow/hide protein sequence
MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQGS
ENKDFSSMLHKSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTITGE
WTTSKINEGMQLCLDASCKLVEIMRSCLKESAVTISEE